HHsearch results for GI: 254781120 and protein with PDBid: 1olt_A
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4S cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=94.24 E-value=0.37 Score=27.99 Aligned_cols=203 Identities=14% Similarity=0.282 Sum_probs=111.3
Q ss_pred CHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHH-HHHHHHHHHHH
Q ss_conf 10048613224411102789899999999999972220344443434445458611014410145445-42899999960
Q gi|254781120|r 124 CSLTCSFCYTGTQKLVRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGEPL-CNFDNVKKSLS 202 (384)
Q Consensus 124 C~m~C~FCaTg~~G~~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGEPl-~N~d~v~~ai~ 202 (384)
|+--|.||.-.+.--.+.-...+.++.+. +.+... +....+++|+.|.| |=|-|- ++-+.+.+-++
T Consensus 62 C~~~C~yC~~~~~~~~~~~~~~~Yl~~L~---~Ei~~~---------a~~~~~~~v~~i~~-GGGTpt~L~~~~l~~l~~ 128 (457)
T 1olt_A 62 CHKLCYFCGCNKIVTRQQHKADQYLDALE---QEIVHR---------APLFAGRHVSQLHW-GGGTPTYLNKAQISRLMK 128 (457)
T ss_dssp ESSCCTTCCSSCEECSCTHHHHHHHHHHH---HHHHHH---------GGGGTTCCEEEEEE-EESCGGGSCHHHHHHHHH
T ss_pred CCCCCCCCCCCEECCCCCCHHHHHHHHHH---HHHHHH---------HHHCCCCCEEEEEE-CCCCCCCCCHHHHHHHHH
T ss_conf 89889999982455888661999999999---999996---------55638997459998-287504489999999999
Q ss_pred CCCCCCCCCCCCC-EEEEEE--CCC-CHHHHHHHCCCCC-CEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 3768457787753-688851--387-4147886012565-1799840455113444123312578999999999998625
Q gi|254781120|r 203 IASDSMGLSFSKR-RITLST--SGF-VPNIARVGEEIGV-MLAISLHAVSNDLRNILVPINRKYPLEMLIDACRHYPGLS 277 (384)
Q Consensus 203 ~l~~~~g~~~~~r-~ITvST--~Gi-~p~I~~la~~~~~-~LAiSLha~~~~~R~~lmPi~~~~~l~~l~~a~~~y~~~~ 277 (384)
.+... |.++.. .||+.+ ..+ .+.+..+.+ .+| .+-+-+.+-++++...+ ||.++.+++.+++..-- ..
T Consensus 129 ~l~~~--f~~~~~~e~tiE~~P~~~~~~~l~~l~~-~G~nRiSlGvQsfd~~vlk~i---~R~~~~e~~~~~i~~~r-~~ 201 (457)
T 1olt_A 129 LLREN--FQFNADAEISIEVDPREIELDVLDHLRA-EGFNRLSMGVQDFNKEVQRLV---NREQDEEFIFALLNHAR-EI 201 (457)
T ss_dssp HHHHH--SCEEEEEEEEEEECSSSCCTHHHHHHHH-TTCCEEEEEEECCCHHHHHHH---TCCCCHHHHHHHHHHHH-HT
T ss_pred HHHHH--CCCCCCEEEEEEECCCCCCHHHHHHHHH-CCCCEEEECCCCCCHHHHHHH---HCCCCHHHHHHHHHHHH-HH
T ss_conf 99986--4778770799982599871767999973-799879960786977988562---14673888999999999-84
Q ss_pred CCCEEEEEEEEECCC-CCCHHHHHHHHHHHCCC-CCEEEEEECCCCCCCCCC--------CCCH-HHHHH---HHHHHHH
Q ss_conf 894599999872699-98889999999983254-531667512778879886--------8898-99999---9999998
Q gi|254781120|r 278 NARRITFEYVMLKGI-NDSPRDALNLIKILKGI-PAKINLIPFNPWPGCEYL--------CSDQ-KDIVT---FSECIKR 343 (384)
Q Consensus 278 ~~rrit~EYvli~gv-NDs~e~a~~L~~ll~~~-~~~vNLIp~N~~~~~~~~--------~~~~-~~i~~---F~~~L~~ 343 (384)
.-..|.+..+ =|+ +.+.+....-++.+-.+ +-+|.+-+|...|+.... -|+. ++.+. -.+.|.+
T Consensus 202 g~~~i~~DLI--~GlPgqt~e~~~~tl~~~~~l~pd~i~~y~~~~~p~~~~~q~~~~~~~lp~~~~~~~~~~~a~~~L~~ 279 (457)
T 1olt_A 202 GFTSTNIDLI--YGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQ 279 (457)
T ss_dssp TCCSCEEEEE--ESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HCCEEECCCC--CCCCCCHHHHHHHHHHHHHHHCCCEEEEEECEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 0543723315--77998337788889988884089811343110078427766322223542027999999999999997
Q ss_pred CCCEE
Q ss_conf 79878
Q gi|254781120|r 344 SGYSS 348 (384)
Q Consensus 344 ~Gi~~ 348 (384)
+|+.-
T Consensus 280 ~GY~~ 284 (457)
T 1olt_A 280 SGYQF 284 (457)
T ss_dssp TTCEE
T ss_pred CCHHH
T ss_conf 78354