HHsearch results for GI: 254781120 and protein with PDBid: 1olt_A

>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4S cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=94.24  E-value=0.37  Score=27.99  Aligned_cols=203  Identities=14%  Similarity=0.282  Sum_probs=111.3

Q ss_pred             CHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHH-HHHHHHHHHHH
Q ss_conf             10048613224411102789899999999999972220344443434445458611014410145445-42899999960
Q gi|254781120|r  124 CSLTCSFCYTGTQKLVRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGEPL-CNFDNVKKSLS  202 (384)
Q Consensus       124 C~m~C~FCaTg~~G~~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGEPl-~N~d~v~~ai~  202 (384)
                      |+--|.||.-.+.--.+.-...+.++.+.   +.+...         +....+++|+.|.| |=|-|- ++-+.+.+-++
T Consensus        62 C~~~C~yC~~~~~~~~~~~~~~~Yl~~L~---~Ei~~~---------a~~~~~~~v~~i~~-GGGTpt~L~~~~l~~l~~  128 (457)
T 1olt_A           62 CHKLCYFCGCNKIVTRQQHKADQYLDALE---QEIVHR---------APLFAGRHVSQLHW-GGGTPTYLNKAQISRLMK  128 (457)
T ss_dssp             ESSCCTTCCSSCEECSCTHHHHHHHHHHH---HHHHHH---------GGGGTTCCEEEEEE-EESCGGGSCHHHHHHHHH
T ss_pred             CCCCCCCCCCCEECCCCCCHHHHHHHHHH---HHHHHH---------HHHCCCCCEEEEEE-CCCCCCCCCHHHHHHHHH
T ss_conf             89889999982455888661999999999---999996---------55638997459998-287504489999999999


Q ss_pred             CCCCCCCCCCCCC-EEEEEE--CCC-CHHHHHHHCCCCC-CEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             3768457787753-688851--387-4147886012565-1799840455113444123312578999999999998625
Q gi|254781120|r  203 IASDSMGLSFSKR-RITLST--SGF-VPNIARVGEEIGV-MLAISLHAVSNDLRNILVPINRKYPLEMLIDACRHYPGLS  277 (384)
Q Consensus       203 ~l~~~~g~~~~~r-~ITvST--~Gi-~p~I~~la~~~~~-~LAiSLha~~~~~R~~lmPi~~~~~l~~l~~a~~~y~~~~  277 (384)
                      .+...  |.++.. .||+.+  ..+ .+.+..+.+ .+| .+-+-+.+-++++...+   ||.++.+++.+++..-- ..
T Consensus       129 ~l~~~--f~~~~~~e~tiE~~P~~~~~~~l~~l~~-~G~nRiSlGvQsfd~~vlk~i---~R~~~~e~~~~~i~~~r-~~  201 (457)
T 1olt_A          129 LLREN--FQFNADAEISIEVDPREIELDVLDHLRA-EGFNRLSMGVQDFNKEVQRLV---NREQDEEFIFALLNHAR-EI  201 (457)
T ss_dssp             HHHHH--SCEEEEEEEEEEECSSSCCTHHHHHHHH-TTCCEEEEEEECCCHHHHHHH---TCCCCHHHHHHHHHHHH-HT
T ss_pred             HHHHH--CCCCCCEEEEEEECCCCCCHHHHHHHHH-CCCCEEEECCCCCCHHHHHHH---HCCCCHHHHHHHHHHHH-HH
T ss_conf             99986--4778770799982599871767999973-799879960786977988562---14673888999999999-84


Q ss_pred             CCCEEEEEEEEECCC-CCCHHHHHHHHHHHCCC-CCEEEEEECCCCCCCCCC--------CCCH-HHHHH---HHHHHHH
Q ss_conf             894599999872699-98889999999983254-531667512778879886--------8898-99999---9999998
Q gi|254781120|r  278 NARRITFEYVMLKGI-NDSPRDALNLIKILKGI-PAKINLIPFNPWPGCEYL--------CSDQ-KDIVT---FSECIKR  343 (384)
Q Consensus       278 ~~rrit~EYvli~gv-NDs~e~a~~L~~ll~~~-~~~vNLIp~N~~~~~~~~--------~~~~-~~i~~---F~~~L~~  343 (384)
                      .-..|.+..+  =|+ +.+.+....-++.+-.+ +-+|.+-+|...|+....        -|+. ++.+.   -.+.|.+
T Consensus       202 g~~~i~~DLI--~GlPgqt~e~~~~tl~~~~~l~pd~i~~y~~~~~p~~~~~q~~~~~~~lp~~~~~~~~~~~a~~~L~~  279 (457)
T 1olt_A          202 GFTSTNIDLI--YGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQ  279 (457)
T ss_dssp             TCCSCEEEEE--ESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             HCCEEECCCC--CCCCCCHHHHHHHHHHHHHHHCCCEEEEEECEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             0543723315--77998337788889988884089811343110078427766322223542027999999999999997


Q ss_pred             CCCEE
Q ss_conf             79878
Q gi|254781120|r  344 SGYSS  348 (384)
Q Consensus       344 ~Gi~~  348 (384)
                      +|+.-
T Consensus       280 ~GY~~  284 (457)
T 1olt_A          280 SGYQF  284 (457)
T ss_dssp             TTCEE
T ss_pred             CCHHH
T ss_conf             78354