HHsearch results for GI: 254781120 and protein with PDBid: 1r30_A
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=98.28 E-value=0.00029 Score=50.99 Aligned_cols=201 Identities=11% Similarity=0.144 Sum_probs=112.3
Q ss_pred CCCHHCCCCCCCC---CCHHHC--CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHH--HH
Q ss_conf 6510048613224---411102--7898999999999999722203444434344454586110144101454454--28
Q gi|254781120|r 122 VGCSLTCSFCYTG---TQKLVR--NLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGEPLC--NF 194 (384)
Q Consensus 122 vGC~m~C~FCaTg---~~G~~R--NLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGEPl~--N~ 194 (384)
-||+.+|.||+-. +.+..+ =++.+||++++..+... .++.+.+-|-+.|.. .+
T Consensus 74 n~C~~~C~FCafs~~~~~~~~~~~l~s~eeI~e~a~~~~~~--------------------G~~~i~l~~g~~~~~~~~~ 133 (369)
T 1r30_A 74 GACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAA--------------------GSTRFCMGAAWKNPHERDM 133 (369)
T ss_dssp SCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHHHHHHT--------------------TCSEEEEEECCSSCCTTTH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--------------------CCEEEEEEECCCCCCCCHH
T ss_conf 99998892299734189998754668879999999989875--------------------9979999957888870279
Q ss_pred HHHHHHHHCCCCCCCCCCCCCEEEEEECCCC--HHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 9999996037684577877536888513874--14788601256517998404551134441233125789999999999
Q gi|254781120|r 195 DNVKKSLSIASDSMGLSFSKRRITLSTSGFV--PNIARVGEEIGVMLAISLHAVSNDLRNILVPINRKYPLEMLIDACRH 272 (384)
Q Consensus 195 d~v~~ai~~l~~~~g~~~~~r~ITvST~Gi~--p~I~~la~~~~~~LAiSLha~~~~~R~~lmPi~~~~~l~~l~~a~~~ 272 (384)
+-....++.+.. ..+ .|.+|. |.+ ..+++|.+----.+.+.+-+ .++.+.++ + ++++.++-+++++.
T Consensus 134 ~~~~~~i~~i~~---~~~---~i~~~~-~~l~~e~l~~Lk~aG~~~~~~~lEt-~~~~~~~~-~--~~~~~~~rl~~l~~ 202 (369)
T 1r30_A 134 PYLEQMVQGVKA---MGL---EACMTL-GTLSESQAQRLANAGLDYYNHNLDT-SPEFYGNI-I--TTRTYQERLDTLEK 202 (369)
T ss_dssp HHHHHHHHHHHH---TTS---EEEEEC-SSCCHHHHHHHHHHCCCEEECCCBS-CHHHHHHH-C--CSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---CCC---EEEEEC-CCCCHHHHHHHHHHCCCEECCCHHH-HHHHHCCC-C--CCCCHHHHHHHHHH
T ss_conf 999999998520---475---476512-6798999999985187888343424-55542134-3--45879999999999
Q ss_pred HHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCC---EEEEEECCCCCCCCCCC---CCHHHHHHHHHHHH----
Q ss_conf 986258945999998726999888999999998325453---16675127788798868---89899999999999----
Q gi|254781120|r 273 YPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIPA---KINLIPFNPWPGCEYLC---SDQKDIVTFSECIK---- 342 (384)
Q Consensus 273 y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~---~vNLIp~N~~~~~~~~~---~~~~~i~~F~~~L~---- 342 (384)
--+ . |-+++- .+|=|..++.+|..++...++.+.. .|-+.+|+|.++.++.. ++.+...+...+.+
T Consensus 203 a~~-~-Gi~~~~--g~i~G~gEt~ed~i~~l~~Lr~L~~~~~~v~~~~f~P~~gT~l~~~~~~~~~e~lr~iAi~Rl~lP 278 (369)
T 1r30_A 203 VRD-A-GIKVCS--GGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMP 278 (369)
T ss_dssp HHH-H-HCEEEC--CEEECSSCCHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCT
T ss_pred HHH-H-CCCCEE--EEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 998-2-897358--889788999999999999998668998665550046689997666789999999999999999778
Q ss_pred HCCCEEEE-CCCCCCC
Q ss_conf 87987854-1587771
Q gi|254781120|r 343 RSGYSSPI-RTPRGLD 357 (384)
Q Consensus 343 ~~Gi~~ti-R~srG~D 357 (384)
+..+.++- |.+.|.+
T Consensus 279 ~~~i~i~~~r~~~~~~ 294 (369)
T 1r30_A 279 TSYVRLSAGREQMNEQ 294 (369)
T ss_dssp TSEEEEESSGGGSCHH
T ss_pred CCCEEEEEHHHHCCHH
T ss_conf 8643886115541877