HHsearch results for GI: 254781120 and protein with PDBid: 2a5h_A
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, S-adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=99.16 E-value=7e-09 Score=85.21 Aligned_cols=265 Identities=15% Similarity=0.213 Sum_probs=145.8
Q ss_pred HHHHHHCCCCCHHHHCC---CCHHHHHHHHHC---CCCCCC----CEEEEEECCCCCCCEEEE-----------CCCCCC
Q ss_conf 99998717999678334---788999998620---225787----023465314544303775-----------247777
Q gi|254781120|r 39 WKWIYVRGIRDFQGMSD---ISQEVRHLLNQH---FSIIYP----EIVDEKISCDGTRKWLLR-----------FPARCI 97 (384)
Q Consensus 39 ~~wiy~k~v~~f~~Mtn---Lpk~lR~~L~e~---~~i~~l----~iv~~~~S~DGT~K~L~~-----------l~d~~~ 97 (384)
|+|-.++.+++.++... |+.+.++.+... |.+..+ ...+.....|--.+-.+- ..|. +
T Consensus 20 w~~ql~~~i~~~~~L~~~l~l~~~~~~~~~~~~~~~p~~vt~yy~~li~~~~p~dPi~rq~~P~~~e~~~~~~~~~Dp-~ 98 (416)
T 2a5h_A 20 WRWQVRNRIETVEELKKYIPLTKEEEEGVAQCVKSLRMAITPYYLSLIDPNDPNDPVRKQAIPTALELNKAAADLEDP-L 98 (416)
T ss_dssp HHHHHHTCBCSHHHHHTTSCCCHHHHHHHHTCTTSCCCCBCHHHHTTSCTTCTTCHHHHHHSCCGGGGCCCTTCBSST-T
T ss_pred HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCHHHCCCCCCCCCCC-C
T ss_conf 999999978899999988298999999999998558874899999863899999878866289989967884444587-3
Q ss_pred C--CCEEEEEEECCCCCCCEEEEEECCCCHHCCCCCCCCCCH--HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 8--981554430234677338988406510048613224411--102789899999999999972220344443434445
Q gi|254781120|r 98 G--GPVEIETVYIPEKSRGTLCVSSQVGCSLTCSFCYTGTQK--LVRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIP 173 (384)
Q Consensus 98 ~--dg~~IEsVlip~~~r~T~CvSSQvGC~m~C~FCaTg~~G--~~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~ 173 (384)
+ +...+..+.=.|++|..+-|+ -.|++.|.||.--..- -...|+..||..=+ +++..
T Consensus 99 ~e~~~~~~~gl~hkY~~rvll~vT--~~Cn~~CrYC~R~~~~~~~~~~l~~~ei~~~i----~yi~~------------- 159 (416)
T 2a5h_A 99 HEDTDSPVPGLTHRYPDRVLLLIT--DMCSMYCRHCTRRRFAGQSDDSMPMERIDKAI----DYIRN------------- 159 (416)
T ss_dssp CTTTSCSBTTEECCSSSEEEEEEE--SCCSSCCTTCTTTTTTTSSSSBCCHHHHHHHH----HHHHT-------------
T ss_pred CCCCCCCCCCCEECCCCEEEEEEC--CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHH-------------
T ss_conf 212248888840015875899845--75477287989877568643434689999999----99984-------------
Q ss_pred CCCCCCCEEEEECCCCHHHHHH-HHHHHHHCCCCCCCCCCCCCEEEEEECCC--CHH--HHHHHCC--CCCCEEEEEECC
Q ss_conf 4586110144101454454289-99999603768457787753688851387--414--7886012--565179984045
Q gi|254781120|r 174 SVGRKISNIVMMGMGEPLCNFD-NVKKSLSIASDSMGLSFSKRRITLSTSGF--VPN--IARVGEE--IGVMLAISLHAV 246 (384)
Q Consensus 174 ~~~~~i~NiVfMGmGEPl~N~d-~v~~ai~~l~~~~g~~~~~r~ITvST~Gi--~p~--I~~la~~--~~~~LAiSLha~ 246 (384)
...|+.|.+-| ||||.--| .+..-++.+..-. +-+.|.++|-|. .|. ...|.+- -.++ |||++-
T Consensus 160 --~~~I~~V~lTG-GePL~r~d~~L~~li~~l~~i~----~i~~iri~T~~~~~~p~r~~~~L~~~g~~~~n--isldth 230 (416)
T 2a5h_A 160 --TPQVRDVLLSG-GDALLVSDETLEYIIAKLREIP----HVEIVRIGSRTPVVLPQRITPELVNMLKKYHP--VWLNTH 230 (416)
T ss_dssp --CTTCCEEEEEE-SCTTSSCHHHHHHHHHHHHTST----TCCEEEEECSHHHHCGGGCCHHHHHHHGGGCS--EEEEEC
T ss_pred --CCCEEEEEEEC-CCCCCCCHHHHHHHHHHHHHCC----CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCE--EEEEEE
T ss_conf --89826999978-9734378899999999998479----98647888067544727779999987742763--899974
Q ss_pred CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEE-EEECCCCCCCC
Q ss_conf 51134441233125789999999999986258945999998726999888999999998325453166-75127788798
Q gi|254781120|r 247 SNDLRNILVPINRKYPLEMLIDACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIPAKIN-LIPFNPWPGCE 325 (384)
Q Consensus 247 ~~~~R~~lmPi~~~~~l~~l~~a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~~vN-LIp~N~~~~~~ 325 (384)
.+. +.++. +++.++++... .. |-.|-+.-||++||||+.+....|.+.+....+..- ++..-++.|..
T Consensus 231 ~~h-~~el~--------~~v~~~i~~l~-~~-Gi~vk~n~VllkGvNDd~~~l~~L~~~l~~~gv~pyyi~~~d~~~g~~ 299 (416)
T 2a5h_A 231 FNH-PNEIT--------EESTRACQLLA-DA-GVPLGNQSVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLE 299 (416)
T ss_dssp CCS-GGGCC--------HHHHHHHHHHH-HT-TCCEEEEEECCTTTTCSHHHHHHHHHHHHHTTEEEEEEECCCCBTTCG
T ss_pred CCC-CCCCC--------HHHHHHHHHHH-HC-CCEEEEECEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHH
T ss_conf 277-10055--------99999999999-76-994873040567743888999999999986797699998347887432
Q ss_pred CCCCCHHHHHHHHHHHHH
Q ss_conf 868898999999999998
Q gi|254781120|r 326 YLCSDQKDIVTFSECIKR 343 (384)
Q Consensus 326 ~~~~~~~~i~~F~~~L~~ 343 (384)
+-+.+.++..+..+.+..
T Consensus 300 ~f~v~~~~~~eI~~~l~~ 317 (416)
T 2a5h_A 300 HFRTPVSKGIEIIEGLRG 317 (416)
T ss_dssp GGCCCHHHHHHHHHTTBT
T ss_pred CCCCCHHHHHHHHHHHHH
T ss_conf 156779999999999986