HHsearch results for GI: 254781120 and protein with PDBid: 3iix_A
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=98.78 E-value=9.7e-07 Score=69.34 Aligned_cols=197 Identities=18% Similarity=0.196 Sum_probs=125.2
Q ss_pred CCCCHHCCCCCCCCCC--HHHC-CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHH
Q ss_conf 0651004861322441--1102-789899999999999972220344443434445458611014410145445428999
Q gi|254781120|r 121 QVGCSLTCSFCYTGTQ--KLVR-NLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGEPLCNFDNV 197 (384)
Q Consensus 121 QvGC~m~C~FCaTg~~--G~~R-NLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGEPl~N~d~v 197 (384)
--||+.+|.||+-... ...| -|+..||++++-.+.+. -++.|+|-|...|....+-.
T Consensus 60 Sn~C~~~C~fC~~~~~~~~~~~~~ls~eeI~~~~~~~~~~--------------------G~~~i~l~~g~~~~~~~~~~ 119 (348)
T 3iix_A 60 SNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQF--------------------GAKTIVLQSGEDPYXMPDVI 119 (348)
T ss_dssp ECCCSCCCTTCTTCTTCCSSCCCBCCHHHHHHHHHHHHHT--------------------TCSEEEEEESCCGGGTTHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--------------------CCCEEEEECCCCCCCCHHHH
T ss_conf 5888998914998836999766158999999999999981--------------------99289982588876648999
Q ss_pred HHHHHCCCCCCCCCCCCCEEEEEECCCC--HHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9996037684577877536888513874--14788601256517998404551134441233125789999999999986
Q gi|254781120|r 198 KKSLSIASDSMGLSFSKRRITLSTSGFV--PNIARVGEEIGVMLAISLHAVSNDLRNILVPINRKYPLEMLIDACRHYPG 275 (384)
Q Consensus 198 ~~ai~~l~~~~g~~~~~r~ITvST~Gi~--p~I~~la~~~~~~LAiSLha~~~~~R~~lmPi~~~~~l~~l~~a~~~y~~ 275 (384)
...++.+.. .+. .|+++ .|.. ..+++|.+----.+.+++.+.+++.++++-| +.+.++.+++++.--
T Consensus 120 ~~~i~~i~~-~~~-----~i~~~-~g~~~~e~l~~L~~aG~~~~~~~~et~~~~~~~~i~~---~~~~~~~~~~i~~~~- 188 (348)
T 3iix_A 120 SDIVKEIKK-MGV-----AVTLS-LGEWPREYYEKWKEAGADRYLLRHETANPVLHRKLRP---DTSFENRLNCLLTLK- 188 (348)
T ss_dssp HHHHHHHHT-TSC-----EEEEE-CCCCCHHHHHHHHHHTCCEEECCCBCSCHHHHHHHST---TSCHHHHHHHHHHHH-
T ss_pred HHHHHHCCC-CCE-----EEEEC-CCCCHHHHHHHHHHHCCCEEEECHHHCCHHHEEECCC---CCCCCHHHHHHHHHH-
T ss_conf 999874033-321-----23202-4543089999999828967985634434021220114---777312467766776-
Q ss_pred HCCCCEEEEEEEEECCC-CCCHHHHHHHHHHHCCCCC-EEEEEECCCCCCCCCC---CCCHHHHHHHHHHH----HHCCC
Q ss_conf 25894599999872699-9888999999998325453-1667512778879886---88989999999999----98798
Q gi|254781120|r 276 LSNARRITFEYVMLKGI-NDSPRDALNLIKILKGIPA-KINLIPFNPWPGCEYL---CSDQKDIVTFSECI----KRSGY 346 (384)
Q Consensus 276 ~~~~rrit~EYvli~gv-NDs~e~a~~L~~ll~~~~~-~vNLIp~N~~~~~~~~---~~~~~~i~~F~~~L----~~~Gi 346 (384)
.. |-+++. .+|=|. +.+.+|....+.+++.++. .+.+-+|.|+||.++. +++.....+...+. -+.+|
T Consensus 189 ~~-Gi~v~~--~~i~GlpgEt~ed~~~~l~~lr~l~~~~~~~~~f~P~pgTpl~~~~~~~~~~~l~~ia~~Rl~lp~~~i 265 (348)
T 3iix_A 189 EL-GYETGA--GSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNI 265 (348)
T ss_dssp HT-TCEEEE--CBEESCTTCCHHHHHHHHHHHHHHTCSEECCEECCCCTTSTTTTSCCCCHHHHHHHHHHHHHHSTTSBC
T ss_pred HC-CCEEEE--EEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 24-972788--899945999999999999999727998898986675199976568995999999999999996898773
Q ss_pred EEEEC
Q ss_conf 78541
Q gi|254781120|r 347 SSPIR 351 (384)
Q Consensus 347 ~~tiR 351 (384)
.++-+
T Consensus 266 ~~~~~ 270 (348)
T 3iix_A 266 PATTA 270 (348)
T ss_dssp BCCHH
T ss_pred EEEEH
T ss_conf 67503