HHSEARCH alignment of GI: 254781120 and SCOP domain: d1tv8a_

Alignment
>d1tv8a_ c.1.28.3 (A:) Molybdenum cofactor biosynthesis protein A MoaA {Staphylococcus aureus [TaxId: 1280]}
Probab=98.48  E-value=3.3e-05  Score=56.23  Aligned_cols=176  Identities=19%  Similarity=0.275  Sum_probs=110.5

Q ss_pred             EEEEEECCCCHHCCCCCCCCC-----CHH---HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf             389884065100486132244-----111---027898999999999999722203444434344454586110144101
Q gi|254781120|r  115 TLCVSSQVGCSLTCSFCYTGT-----QKL---VRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMG  186 (384)
Q Consensus       115 T~CvSSQvGC~m~C~FCaTg~-----~G~---~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMG  186 (384)
                      +++|+----|.+.|+||....     ..+   .+-|+.+++..-+   ++ +.+              .  .+..|.|.|
T Consensus        13 ~l~ieiT~~CNlrC~~C~~~~~~~~~~~~~~~~~~ls~e~~~~li---~~-~~~--------------~--g~~~v~~~G   72 (327)
T d1tv8a_          13 DLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIA---KV-YAE--------------L--GVKKIRITG   72 (327)
T ss_dssp             EEEEECCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHH---HH-HHH--------------T--TCCEEEEES
T ss_pred             CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH---HH-HHH--------------C--CCEEEEECC
T ss_conf             579972210089694789760167777647721459999999999---99-987--------------5--983897379


Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC--HHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCHH
Q ss_conf             454454289999996037684577877536888513874--147886012565179984045511344412331257899
Q gi|254781120|r  187 MGEPLCNFDNVKKSLSIASDSMGLSFSKRRITLSTSGFV--PNIARVGEEIGVMLAISLHAVSNDLRNILVPINRKYPLE  264 (384)
Q Consensus       187 mGEPl~N~d~v~~ai~~l~~~~g~~~~~r~ITvST~Gi~--p~I~~la~~~~~~LAiSLha~~~~~R~~lmPi~~~~~l~  264 (384)
                       |||+++.|-+-....... . +   ....+.++|-++.  ..+++|.+..-..+.+||.+.+++.-+.+.-.+  ...+
T Consensus        73 -GEp~l~~~~~e~i~~~~~-~-~---~~~~~~~Tng~ll~~~~~~~l~~~g~~~i~iSldg~~~e~~~~~rg~~--g~~~  144 (327)
T d1tv8a_          73 -GEPLMRRDLDVLIAKLNQ-I-D---GIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRN--IKAT  144 (327)
T ss_dssp             -SCGGGSTTHHHHHHHHTT-C-T---TCCEEEEEECSTTHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSC--CCHH
T ss_pred             -CCCCCCCCHHHHHHHHHH-H-C---CCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHEEEC--CCCC
T ss_conf             -861246647999998754-2-1---222013444311120679999983998786202568787764510203--5421


Q ss_pred             HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf             9999999998625894599999872699988899999999832545316675127788
Q gi|254781120|r  265 MLIDACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIPAKINLIPFNPWP  322 (384)
Q Consensus       265 ~l~~a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N~~~  322 (384)
                      ..+.+++... .. +-++.+..+++.+.|+..-  ..+.++++.....+.++++.+..
T Consensus       145 ~~~~~~~~~~-~~-g~~~~~~~~v~~~~n~~~~--~~~~~~~~~~~~~~~~~~~~~~~  198 (327)
T d1tv8a_         145 TILEQIDYAT-SI-GLNVKVNVVIQKGINDDQI--IPMLEYFKDKHIEIRFIEFMDVG  198 (327)
T ss_dssp             HHHHHHHHHH-HT-TCEEEEEEEECTTTTGGGH--HHHHHHHHHTTCCEEEEECCCBC
T ss_pred             HHHHHHHHHH-HC-CCCCCEEEEEECCCCCCCC--HHHHHHHHHHCCCCCEEEEECCC
T ss_conf             1236899999-85-9986325898568353100--89999997406541013531146


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Radical SAM enzymes
family: MoCo biosynthesis proteins
domain: Molybdenum cofactor biosynthesis protein A MoaA
species: Staphylococcus aureus [TaxId: 1280]