HHsearch results for GI: 254781121 and protein with PDBid: 3dtd_A

>3dtd_A Invasion-associated protein B; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 2.35A {Bartonella henselae}
Probab=99.94  E-value=9.8e-27  Score=181.75  Aligned_cols=142  Identities=16%  Similarity=0.200  Sum_probs=116.6

Q ss_pred             CCCHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEC
Q ss_conf             01011012377589999359871655664120002344455553057998617877610368983103467772699971
Q gi|254781121|r   35 PEPTLRNQFSRWSVYVYPDLNKKLCFSLSVPVTVEPLEGVRHGVNFFIISLKKEENSAYVSELVMDYPLDEEEMVSLEVK  114 (185)
Q Consensus        35 ~~~~~~~~f~dW~v~~~~~~~~~~C~i~s~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~vs~~~gy~~~~~~~v~l~Id  114 (185)
                      ..+...++||||+++|..++++++|++.|.+...+     .+...++.+.++++++.  .+.+..|+++.+.+++.+.||
T Consensus        21 ~~~~~~etfgdW~v~C~~~~~~~~C~~~q~~~~~~-----~~~~~~~~v~~~~~~~~--~~~v~vPlG~~l~~g~~i~vD   93 (175)
T 3dtd_A           21 GASSLTETYGLWSINCGIQEGKKVCFMHRQEVNDQ-----NRVVVAMSVVLNADGVV--SGNLTVPFGILVSKPVRLQVD   93 (175)
T ss_dssp             ---CBCEEETTEEEEECCC---CCEEEEEEEEBTT-----CCEEEEEEEEECTTSCE--EEEEEECSSBCTTSCEEEEET
T ss_pred             CCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCC-----CCEEEEEEEEECCCCCE--EEEEEEECCCCCCCCCEEEEE
T ss_conf             88001125378527971379997799998775578-----98889999997889863--799999455105999789997


Q ss_pred             CCCCCCCCCCEECCCCCCEECCCCCCHHHHHHHHCCCEEEEEEEC---CCCCEEEEEEECCCHHHHHHHHHHC
Q ss_conf             665554443100037874102456696789997367769999991---8998899985144289999988734
Q gi|254781121|r  115 GKNASGTIFKMKSYNNRAAFEKRSQDTVLIEEMKRGKELVVSAKS---KRGTNTRYIYSLIGLSDSLADIRKC  184 (185)
Q Consensus       115 ~~~~~~~~~~~~~~~~~a~~~~~~~d~~~i~amk~G~~~~v~~~s---~~g~~~~~~~SL~GFt~A~~~~~kc  184 (185)
                      +++. ...+.|.+|++.||++....|+++|++||+|++++|.+..   .+|+.++++|||+||++||+++++|
T Consensus        94 ~g~~-~~~l~~~~C~~~gC~a~~~~~~~~i~amk~G~~~~v~~~~~~~~~~~~~~~~~SL~Gft~Al~~L~e~  165 (175)
T 3dtd_A           94 EGKA-VIETGIRTCVPAGCIVPIVFDKNYVAALRAGKHLKLAMTIAAPGEPPLNDLFVQLNGFSNALNRLIAL  165 (175)
T ss_dssp             TSSC-EEEECCCEEETTEEEEEEEECHHHHHHHHHCSEEEEEEEBSSTTCCEEEEEEEECTTHHHHHHHHHHH
T ss_pred             CCCC-EEEEEEEEECCCCEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf             6984-05776788747852988368989999998188447999974688897788778424599999999998