HHsearch results for GI: 254781121 and protein with PDBid: 3dtd_A
>3dtd_A Invasion-associated protein B; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 2.35A {Bartonella henselae}
Probab=99.94 E-value=9.8e-27 Score=181.75 Aligned_cols=142 Identities=16% Similarity=0.200 Sum_probs=116.6
Q ss_pred CCCHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEC
Q ss_conf 01011012377589999359871655664120002344455553057998617877610368983103467772699971
Q gi|254781121|r 35 PEPTLRNQFSRWSVYVYPDLNKKLCFSLSVPVTVEPLEGVRHGVNFFIISLKKEENSAYVSELVMDYPLDEEEMVSLEVK 114 (185)
Q Consensus 35 ~~~~~~~~f~dW~v~~~~~~~~~~C~i~s~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~vs~~~gy~~~~~~~v~l~Id 114 (185)
..+...++||||+++|..++++++|++.|.+...+ .+...++.+.++++++. .+.+..|+++.+.+++.+.||
T Consensus 21 ~~~~~~etfgdW~v~C~~~~~~~~C~~~q~~~~~~-----~~~~~~~~v~~~~~~~~--~~~v~vPlG~~l~~g~~i~vD 93 (175)
T 3dtd_A 21 GASSLTETYGLWSINCGIQEGKKVCFMHRQEVNDQ-----NRVVVAMSVVLNADGVV--SGNLTVPFGILVSKPVRLQVD 93 (175)
T ss_dssp ---CBCEEETTEEEEECCC---CCEEEEEEEEBTT-----CCEEEEEEEEECTTSCE--EEEEEECSSBCTTSCEEEEET
T ss_pred CCCCCCCCCCCCEEEEECCCCCCEEEEEEEEECCC-----CCEEEEEEEEECCCCCE--EEEEEEECCCCCCCCCEEEEE
T ss_conf 88001125378527971379997799998775578-----98889999997889863--799999455105999789997
Q ss_pred CCCCCCCCCCEECCCCCCEECCCCCCHHHHHHHHCCCEEEEEEEC---CCCCEEEEEEECCCHHHHHHHHHHC
Q ss_conf 665554443100037874102456696789997367769999991---8998899985144289999988734
Q gi|254781121|r 115 GKNASGTIFKMKSYNNRAAFEKRSQDTVLIEEMKRGKELVVSAKS---KRGTNTRYIYSLIGLSDSLADIRKC 184 (185)
Q Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~d~~~i~amk~G~~~~v~~~s---~~g~~~~~~~SL~GFt~A~~~~~kc 184 (185)
+++. ...+.|.+|++.||++....|+++|++||+|++++|.+.. .+|+.++++|||+||++||+++++|
T Consensus 94 ~g~~-~~~l~~~~C~~~gC~a~~~~~~~~i~amk~G~~~~v~~~~~~~~~~~~~~~~~SL~Gft~Al~~L~e~ 165 (175)
T 3dtd_A 94 EGKA-VIETGIRTCVPAGCIVPIVFDKNYVAALRAGKHLKLAMTIAAPGEPPLNDLFVQLNGFSNALNRLIAL 165 (175)
T ss_dssp TSSC-EEEECCCEEETTEEEEEEEECHHHHHHHHHCSEEEEEEEBSSTTCCEEEEEEEECTTHHHHHHHHHHH
T ss_pred CCCC-EEEEEEEEECCCCEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf 6984-05776788747852988368989999998188447999974688897788778424599999999998