RPSBLAST alignment of GI: 254781121 and protein with PDBid: 3dtd
>3dtd_A Invasion-associated protein B; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 2.35A {Bartonella henselae} Length = 175
Score = 80.9 bits (199), Expect = 2e-16
Identities = 28/171 (16%), Positives = 54/171 (31%), Gaps = 16/171 (9%)
Query: 21 MVSSVSAGYANASQP--EPTLRNQFSRWSVYVYPDLNKKLCFSLSVPVTVEPLEGVRHGV 78
S + A+ P +L + WS+ KK+CF V + R V
Sbjct: 5 NSKSTTTKDTVATLPNGASSLTETYGLWSINCGIQEGKKVCFMHRQEVNDQN----RVVV 60
Query: 79 NFFIISLKKEENSAYVSELVMDYPLDEEEMVSLEVKGKNASGTIFKMKSYNNRAAFEKRS 138
++ S ++ + + + V L+V A +++
Sbjct: 61 AMSVVLNADGVVSGNLT-VPFGILVSKP--VRLQVDEGKAVIE-TGIRTCVPAGCIVPIV 116
Query: 139 QDTVLIEEMKRGKELVVS---AKSKRGTNTRYIYSLIGLS---DSLADIRK 183
D + ++ GK L ++ A L G S + L ++K
Sbjct: 117 FDKNYVAALRAGKHLKLAMTIAAPGEPPLNDLFVQLNGFSNALNRLIALQK 167