RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254781121|ref|YP_003065534.1| hypothetical protein
CLIBASIA_05115 [Candidatus Liberibacter asiaticus str. psy62]
         (185 letters)



>d2bcgg2 c.3.1.3 (G:400-446) Guanine nucleotide dissociation
           inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
           [TaxId: 4932]}
          Length = 47

 Score = 24.3 bits (53), Expect = 7.2
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 122 IFKMKSYNNRAAFEKRSQDTVLIEEMKRGKELVVSAK 158
           I+  +SY+  + FE  + D   I     G  LV+  +
Sbjct: 10  IYLSRSYDASSHFESMTDDVKDIYFRVTGHPLVLKQR 46


>d1qexa_ b.32.1.1 (A:) gp9 {Bacteriophage T4 [TaxId: 10665]}
          Length = 288

 Score = 23.7 bits (51), Expect = 9.8
 Identities = 6/23 (26%), Positives = 8/23 (34%)

Query: 108 MVSLEVKGKNASGTIFKMKSYNN 130
           M  L V  ++  G   K    N 
Sbjct: 199 MAKLLVTCQSVDGRKIKTAEINI 221


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.134    0.374 

Gapped
Lambda     K      H
   0.267   0.0683    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 651,206
Number of extensions: 28448
Number of successful extensions: 53
Number of sequences better than 10.0: 1
Number of HSP's gapped: 53
Number of HSP's successfully gapped: 3
Length of query: 185
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 105
Effective length of database: 1,309,196
Effective search space: 137465580
Effective search space used: 137465580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.1 bits)