RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254781121|ref|YP_003065534.1| hypothetical protein CLIBASIA_05115 [Candidatus Liberibacter asiaticus str. psy62] (185 letters) >d2bcgg2 c.3.1.3 (G:400-446) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47 Score = 24.3 bits (53), Expect = 7.2 Identities = 10/37 (27%), Positives = 17/37 (45%) Query: 122 IFKMKSYNNRAAFEKRSQDTVLIEEMKRGKELVVSAK 158 I+ +SY+ + FE + D I G LV+ + Sbjct: 10 IYLSRSYDASSHFESMTDDVKDIYFRVTGHPLVLKQR 46 >d1qexa_ b.32.1.1 (A:) gp9 {Bacteriophage T4 [TaxId: 10665]} Length = 288 Score = 23.7 bits (51), Expect = 9.8 Identities = 6/23 (26%), Positives = 8/23 (34%) Query: 108 MVSLEVKGKNASGTIFKMKSYNN 130 M L V ++ G K N Sbjct: 199 MAKLLVTCQSVDGRKIKTAEINI 221 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.319 0.134 0.374 Gapped Lambda K H 0.267 0.0683 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 651,206 Number of extensions: 28448 Number of successful extensions: 53 Number of sequences better than 10.0: 1 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 3 Length of query: 185 Length of database: 2,407,596 Length adjustment: 80 Effective length of query: 105 Effective length of database: 1,309,196 Effective search space: 137465580 Effective search space used: 137465580 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 50 (23.1 bits)