HHSEARCH alignment of GI: 254781122 and SCOP domain: d1ig3a2

Alignment

Probab=100.00  E-value=2.2e-32  Score=222.81  Aligned_cols=130  Identities=20%  Similarity=0.299  Sum_probs=109.4

Q ss_pred             CCCCEEEEEEECCCCCCCHHHHHHHCC-CCEEEEEHHHHHHHHC------CCCCEEEEECCCCCCHHHHHHHCCCC-EEE
Q ss_conf             287406999987799981688985134-9499991888999988------99734999721129988997403188-599
Q gi|254781122|r    6 TNKFIDFAILLNGDIRVTNRLLCAIES-CKVIAADGGICHASQL------KVVPELWIGDFDSVDRTLLQQWSSIK-RIF   77 (222)
Q Consensus         6 ~~~~~~~~Ii~nG~~~~~~~~~~~~~~-~~iIavDgGa~~l~~~------~i~Pd~iiGDfDSi~~~~~~~~~~~~-~i~   77 (222)
                      +.+++.++|++|++++  +.+...|+. ..+||||||||+++++      ++.||+|+|||||++++.+++++..+ .++
T Consensus        25 ~~~~~~aliiLN~pi~--~~~~~lw~~a~~~I~aDGGAN~L~d~~~~~~~~~~PD~IiGDfDSi~~~~~~~~~~~g~~ii  102 (169)
T d1ig3a2          25 TGNLKYCLVVLNQPLD--ARFRHLWKKALLRACADGGANHLYDLTEGERESFLPEFVSGDFDSIRPEVKEYYTKKGCDLI  102 (169)
T ss_dssp             SCCCCEEEEECSSCCC--TTHHHHHHHCSEEEEETTHHHHHHHTCTTCGGGCCCSEEEECTTSSCHHHHHHHHHTTCEEE
T ss_pred             CCCCCEEEEEECCCCC--HHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEE
T ss_conf             8874779999089848--88999997478799974779999987532023799998976688898578899986597587


Q ss_pred             ECCCCCCCHHHHHHHHHHHC------CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCC-CEEEEEEC
Q ss_conf             20567779489999999975------997599995378781247889999999886269-81999948
Q gi|254781122|r   78 YPNDKDMADGEIAVHKALQS------GARNIILVGSISGQRFDYALQHITLATSLKKKN-INVTLTSG  138 (222)
Q Consensus        78 ~~~dkD~TD~ekAL~~~~~~------~~~~i~i~gg~~G~R~DH~lani~~L~~~~~~~-~~i~l~~~  138 (222)
                      +.+|||+|||||||+++.+.      ++..++++|| +|||+||+|+|+++|+++.+.. .+++++++
T Consensus       103 ~~~dQD~TD~eKAl~~~~~~~~~~~~~~~~I~vlG~-~GGR~DH~lanl~~L~~~~~~~~~~VIll~e  169 (169)
T d1ig3a2         103 STPDQDHTDFTKCLQVLQRKIEEKELQVDVIVTLGG-LGGRFDQIMASVNTLFQATHITPVPIIIIQK  169 (169)
T ss_dssp             ECCCTTSCHHHHHHHHHHHHHHHTTCCCSEEEEECC-SSSCHHHHHHHHHHHHHGGGTCSSCEEEEET
T ss_pred             ECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEC-CCCCHHHHHHHHHHHHHHHCCCCCCEEEECC
T ss_conf             786657566999999999741443169987999927-8882879999999999702479984798359

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Thiamin pyrophosphokinase, catalytic domain
superfamily: Thiamin pyrophosphokinase, catalytic domain
family: Thiamin pyrophosphokinase, catalytic domain
domain: Thiamin pyrophosphokinase, catalytic domain
species: Mouse (Mus musculus) [TaxId: 10090]