RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR03415
>gnl|CDD|132456 TIGR03415, ABC_choXWV_ATP, choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines. Length = 382
Score = 44.0 bits (104), Expect = 1e-04
Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 37/187 (19%)
Query: 23 DVCLSIKPKERICLVGCNGSGKSTLLKIAAGITEPQSGNVFLHSSSRLGYLEQNP----- 77
+ L I+ E L+G +GSGKS+LL+ G+ G+V + +
Sbjct: 42 NASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDG----SIDVANCDA 97
Query: 78 -DLSHFST--ISQYIDD-------TIKDTI------------EAPYSPYSLLKKFNLRE- 114
L T +S T+++ + E L+ L +
Sbjct: 98 ATLRRLRTHRVSMVFQKFALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQW 157
Query: 115 QDR-IENLSVGQTRCVALMKMLISRPDILILDEPTNHLDFRTIHWMEQELL----KINSA 169
D+ LS G + V L + DIL++DEP + LD ++ ELL K+N
Sbjct: 158 ADKKPGELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKT 217
Query: 170 LIFVSHD 176
+IFVSHD
Sbjct: 218 IIFVSHD 224