RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR01189

>gnl|CDD|162243 TIGR01189, ccmA, heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c. Length = 198
 Score = 68.9 bits (169), Expect = 3e-12
 Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 32/169 (18%)

Query: 6   LRLDHISATIGGIDLLQDVCLSIKPKERICLVGCNGSGKSTLLKIAAGITEPQSGNVFL- 64
           L   +++ + G   L + +  ++   E + + G NG GK+TLL+I AG+  P SG V   
Sbjct: 1   LAARNLACSRGERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWN 60

Query: 65  ---HSSSRLGYLEQ----------NPDLS-----HF-STISQYIDDTIKDTIEAPYSPYS 105
               +  R                 P+LS     HF + I      TI+D          
Sbjct: 61  GTALAEQRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHGGAQRTIED---------- 110

Query: 106 LLKKFNLR--EQDRIENLSVGQTRCVALMKMLISRPDILILDEPTNHLD 152
            L    L   E      LS GQ R +AL ++ +SR  + ILDEPT  LD
Sbjct: 111 ALAAVGLTGFEDLPAAQLSAGQQRRLALARLWLSRAPLWILDEPTTALD 159