RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR01978
>gnl|CDD|162636 TIGR01978, sufC, FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA. Length = 243
Score = 53.8 bits (130), Expect = 1e-07
Identities = 51/241 (21%), Positives = 93/241 (38%), Gaps = 65/241 (26%)
Query: 6 LRLDHISATIGGIDLLQDVCLSIKPKERICLVGCNGSGKSTLLKIAAG-----IT----- 55
L++ + ++ ++L+ V L++K E ++G NGSGKSTL K AG +T
Sbjct: 1 LKIKDLHVSVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTIL 60
Query: 56 ---------EPQ--------------------SGNVFLHSS--SRLGYLEQNP-DLSHFS 83
EP S FL S+ +R + P DL F
Sbjct: 61 FKGQDLLELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL 120
Query: 84 TISQYIDDTIKDTIEAPYSPYSLLKKFNLREQDRIENLSVGQTRCVALMKMLISRPDILI 143
+ + + ++ + S+ + F+ E+ R E +++M + P + I
Sbjct: 121 KLLKAKLALLG--MDEEFLNRSVNEGFSGGEKKRNE-----------ILQMALLEPKLAI 167
Query: 144 LDEPTNHLD---FRTIHWMEQELLKINSALIFVSHDRRFLETLSTTTVWLDRGCLHHLDQ 200
LDE + LD + + L + + + + ++H +R L + V H L
Sbjct: 168 LDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYV-------HVLLD 220
Query: 201 G 201
G
Sbjct: 221 G 221