RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR03608
>gnl|CDD|163352 TIGR03608, L_ocin_972_ABC, putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins. Length = 206
Score = 74.6 bits (184), Expect = 6e-14
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 30/196 (15%)
Query: 8 LDHISATIGGIDLLQDVCLSIKPKERICLVGCNGSGKSTLLKIAAGITEPQSGNVFL--- 64
L +IS G +L D+ L+I+ + ++G +GSGKSTLL I + + SG V+L
Sbjct: 1 LKNISKKFGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGK 60
Query: 65 -----HSS-------SRLGYLEQNPDLSHFSTISQ-------YIDDTIKDTIEAPYSPYS 105
+S +LGYL QN L T+ + Y + K+ E
Sbjct: 61 ETPPLNSKKASKFRREKLGYLFQNFALIENETVEENLDLGLKYKKLSKKEKREK---KKE 117
Query: 106 LLKKFNL--REQDRIENLSVGQTRCVALMKMLISRPDILILDEPTNHLDFRTIHWMEQEL 163
L+K L + + +I LS G+ + VAL + ++ P +++ DEPT LD + + L
Sbjct: 118 ALEKVGLNLKLKQKIYELSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEVLDLL 177
Query: 164 LKINSA---LIFVSHD 176
L++N +I V+HD
Sbjct: 178 LELNDEGKTIIIVTHD 193