RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR03719
>gnl|CDD|163431 TIGR03719, ABC_ABC_ChvD, ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown. Length = 552
Score = 93.1 bits (232), Expect = 2e-19
Identities = 68/241 (28%), Positives = 118/241 (48%), Gaps = 31/241 (12%)
Query: 5 ILRLDHISATIGGIDLLQDVCLSIKPKERICLVGCNGSGKSTLLKIAAGITEPQSGNVFL 64
++ +++S G L+ D+ + P + ++G NG+GKSTL ++ G +P SG + +
Sbjct: 322 VIEAENLSKGFGDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKI 381
Query: 65 HSSSRLGYLEQ-----NPDLSHFSTISQYIDDTIKDTIEAPYSPYSLLKKFNLR---EQD 116
+ +L Y++Q +P+ + + IS +D E P Y + +FN + +Q
Sbjct: 382 GETVKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAY--VGRFNFKGSDQQK 439
Query: 117 RIENLSVGQTRCVALMKMLISRPDILILDEPTNHLDFRTIHWMEQELLKINSALIFVSHD 176
++ LS G+ V L K L S ++L+LDEPTN LD T+ +E+ LL+ + +SHD
Sbjct: 440 KVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFAGCAVVISHD 499
Query: 177 RRFLETLSTTTVWLDRGCLHHL-----------DQGFAYFESWKKNILQQEQIRYHNLKK 225
R F LDR H L + ++ +E KK L ++ + H +K
Sbjct: 500 RWF----------LDRIATHILAFEGDSHVEWFEGNYSEYEEDKKRRLGEDADQPHRIKY 549
Query: 226 K 226
K
Sbjct: 550 K 550