RPSBLAST alignment for GI: 254781123 and conserved domain: cd03220
>gnl|CDD|72979 cd03220, ABC_KpsT_Wzt, ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.. Length = 224
Score = 91.0 bits (226), Expect = 9e-19
Identities = 54/205 (26%), Positives = 83/205 (40%), Gaps = 17/205 (8%)
Query: 273 HLQTTQSSGKLVLEADKITKQYDDRLVVKDFSLRIHYGECIGIVGPNGAGKTTLLKLLTG 332
SS L + + +KD S + GE IG++G NGAGK+TLL+LL G
Sbjct: 11 PTYKGGSSSLKKLGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAG 70
Query: 333 KIKPDCGFITLGTNLKIATIDQKREDIDPDKSLASYLTGSSGDSL------MVRGESRHV 386
PD G +T +++++ + LTG L + R E
Sbjct: 71 IYPPDSGTVT--VRGRVSSL------LGLGGGFNPELTGRENIYLNGRLLGLSRKEIDEK 122
Query: 387 AGYIKDFLFHPDQAHSLMKHLSGGEKMRAIVARVLAQPFNFLIMDEPTNDLDFETLDFLE 446
I +F D +K S G K R A A + L++DE D + +
Sbjct: 123 IDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQ 182
Query: 447 RTITQLQ---GTILIVSHDRDFLDR 468
R + +L T+++VSHD + R
Sbjct: 183 RRLRELLKQGKTVILVSHDPSSIKR 207