RPSBLAST alignment for GI: 254781123 and conserved domain: cd03222

>gnl|CDD|72981 cd03222, ABC_RNaseL_inhibitor, The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.. Length = 177

 Score = 43.4 bits (102), Expect = 2e-04
 Identities = 44/164 (26%), Positives = 61/164 (37%), Gaps = 53/164 (32%)

Query: 28  IKPKERICLVGCNGSGKSTLLKIAAGITEPQSGNVFLHSSSRLGYLEQNPDLSHFSTISQ 87
           +K  E I +VG NG+GK+T +KI AG   P   N                D        Q
Sbjct: 22  VKEGEVIGIVGPNGTGKTTAVKILAGQLIPNGDNDEW-------------DGITPVYKPQ 68

Query: 88  YIDDTIKDTIEAPYSPYSLLKKFNLREQDRIENLSVGQTRCVALMKMLISRPDILILDEP 147
           YID                              LS G+ + VA+   L+      + DEP
Sbjct: 69  YID------------------------------LSGGELQRVAIAAALLRNATFYLFDEP 98

Query: 148 TNHLDF-------RTIHWMEQELLKINSALIFVSHDRRFLETLS 184
           + +LD        R I  + +E  K  +AL+ V HD   L+ LS
Sbjct: 99  SAYLDIEQRLNAARAIRRLSEEGKK--TALV-VEHDLAVLDYLS 139