RPSBLAST alignment for GI: 254781123 and conserved domain: cd03223
>gnl|CDD|72982 cd03223, ABCD_peroxisomal_ALDP, Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asymptomatic).. Length = 166
Score = 76.3 bits (188), Expect = 2e-14
Identities = 50/188 (26%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Query: 6 LRLDHIS-ATIGGIDLLQDVCLSIKPKERICLVGCNGSGKSTLLKIAAGITEPQSGNVFL 64
+ L+++S AT G LL+D+ IKP +R+ + G +G+GKS+L + AG+ SG + +
Sbjct: 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGM 60
Query: 65 HSSSRLGYLEQNPDLSHFSTISQYIDDTIKDTIEAPYSPYSLLKKFNLREQDRIENLSVG 124
L +L Q P L T+++ + P+ + LS G
Sbjct: 61 PEGEDLLFLPQRPYLP---------LGTLREQLIYPWD----------------DVLSGG 95
Query: 125 QTRCVALMKMLISRPDILILDEPTNHLDFRTIHWMEQELLKINSALIFVSHDRRFLETLS 184
+ + +A ++L+ +P + LDE T+ LD + + Q L ++ +I V H R L
Sbjct: 96 EQQRLAFARLLLHKPKFVFLDEATSALDEESEDRLYQLLKELGITVISVGH-RPSLWKFH 154
Query: 185 TTTVWLDR 192
+ LD
Sbjct: 155 DRVLDLDG 162