RPSBLAST alignment for GI: 254781123 and conserved domain: cd03228
>gnl|CDD|72987 cd03228, ABCC_MRP_Like, The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 171
Score = 93.5 bits (233), Expect = 2e-19
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 47/185 (25%)
Query: 6 LRLDHISATIGGID--LLQDVCLSIKPKERICLVGCNGSGKSTLLKIAAGITEPQSGNVF 63
+ ++S + G +L+DV L+IKP E++ +VG +GSGKSTLLK+ + +P SG +
Sbjct: 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEIL 60
Query: 64 L-----------HSSSRLGYLEQNPDLSHFSTISQYIDDTIKDTIEAPYSPYSLLKKFNL 112
+ + Y+ Q+P L TI++ I
Sbjct: 61 IDGVDLRDLDLESLRKNIAYVPQDPFL---------FSGTIRENI--------------- 96
Query: 113 REQDRIENLSVGQTRCVALMKMLISRPDILILDEPTNHLDFRTIHWMEQELLKI--NSAL 170
LS GQ + +A+ + L+ P ILILDE T+ LD T + + L + +
Sbjct: 97 --------LSGGQRQRIAIARALLRDPPILILDEATSALDPETEALILEALRALAKGKTV 148
Query: 171 IFVSH 175
I ++H
Sbjct: 149 IVIAH 153