RPSBLAST alignment for GI: 254781123 and conserved domain: cd03233
>gnl|CDD|72992 cd03233, ABC_PDR_domain1, The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 202
Score = 67.1 bits (164), Expect = 1e-11
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 22/180 (12%)
Query: 288 DKITKQYDDRLVVKDFSLRIHYGECIGIVGPNGAGKTTLLKLLTGKIKPDCGFITLGTNL 347
K ++KDFS + GE + ++G G+G +TLLK L + N+
Sbjct: 11 FTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRT---------EGNV 61
Query: 348 KIATIDQKREDIDPDKSLASYLTGSSGDSLMVRGESRHVA----GYIKDFLFHPDQAHSL 403
+ D I + Y G+ + V E H DF + +
Sbjct: 62 SVEG-DIHYNGIPYKEFAEKY----PGEIIYVSEEDVHFPTLTVRETLDFALRC-KGNEF 115
Query: 404 MKHLSGGEKMRAIVARVLAQPFNFLIMDEPTNDLDFET-LDFLE--RTITQLQGTILIVS 460
++ +SGGE+ R +A L + L D T LD T L+ L+ RT+ + T VS
Sbjct: 116 VRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVS 175