RPSBLAST alignment for GI: 254781123 and conserved domain: cd03233
>gnl|CDD|72992 cd03233, ABC_PDR_domain1, The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 202
Score = 54.4 bits (131), Expect = 8e-08
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 26/150 (17%)
Query: 14 TIGGIDLLQDVCLSIKPKERICLVGCNGSGKSTLLKIAAGITEPQ---SGNVF------- 63
I +L+D +KP E + ++G GSG STLLK A TE G++
Sbjct: 16 GRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYK 75
Query: 64 -LHSSSRLGYLEQNPDLSHFSTISQYIDDTIKDTIEAPYSPYSLLKKFNLREQDRIENLS 122
+ + + HF T+ T+++T++ ++L + + + +S
Sbjct: 76 EFAEKYPGEIIYVSEEDVHFPTL------TVRETLD-----FAL----RCKGNEFVRGIS 120
Query: 123 VGQTRCVALMKMLISRPDILILDEPTNHLD 152
G+ + V++ + L+SR +L D T LD
Sbjct: 121 GGERKRVSIAEALVSRASVLCWDNSTRGLD 150