RPSBLAST alignment for GI: 254781123 and conserved domain: cd03251

>gnl|CDD|73010 cd03251, ABCC_MsbA, MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 234
 Score = 73.7 bits (181), Expect = 2e-13
 Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 18/195 (9%)

Query: 285 LEADKITKQY--DDRLVVKDFSLRIHYGECIGIVGPNGAGKTTLLKLLTGKIKPDCGFIT 342
           +E   +T +Y  D   V++D SL I  GE + +VGP+G+GK+TL+ L+      D G I 
Sbjct: 1   VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRIL 60

Query: 343 L-GTNLKIATIDQKREDI-----DP---DKSLASYLTGSSGDSLMVRGESRHVAGYIKDF 393
           + G +++  T+   R  I     D    + ++A  +      +     E    A    +F
Sbjct: 61  IDGHDVRDYTLASLRRQIGLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEF 120

Query: 394 LFH-PDQAHSLMKH----LSGGEKMRAIVARVLAQPFNFLIMDEPTNDLDFETLDFLERT 448
           +   P+   +++      LSGG++ R  +AR L +    LI+DE T+ LD E+   ++  
Sbjct: 121 IMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAA 180

Query: 449 ITQLQG--TILIVSH 461
           + +L    T  +++H
Sbjct: 181 LERLMKNRTTFVIAH 195