RPSBLAST alignment for GI: 254781123 and conserved domain: cd03254
>gnl|CDD|73013 cd03254, ABCC_Glucan_exporter_like, Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 229
Score = 65.6 bits (160), Expect = 4e-11
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 18/183 (9%)
Query: 296 DRLVVKDFSLRIHYGECIGIVGPNGAGKTTLLKLLTGKIKPDCGFITL-GTNLKIATIDQ 354
+ V+KD + I GE + IVGP GAGKTTL+ LL P G I + G +++ +
Sbjct: 15 KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKS 74
Query: 355 KREDID---------PDKSLASYLTGSSGDSLMVRGESRHVAGYIKDFLFH-PDQAHSLM 404
R I + + G + E+ AG DF+ P+ +++
Sbjct: 75 LRSMIGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAG-AHDFIMKLPNGYDTVL 133
Query: 405 KH----LSGGEKMRAIVARVLAQPFNFLIMDEPTNDLDFETLDFLERTITQLQG--TILI 458
LS GE+ +AR + + LI+DE T+++D ET ++ + +L T +I
Sbjct: 134 GENGGNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLMKGRTSII 193
Query: 459 VSH 461
++H
Sbjct: 194 IAH 196