RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254781124|ref|YP_003065537.1| hypothetical protein CLIBASIA_05130 [Candidatus Liberibacter asiaticus str. psy62] (101 letters) >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} (A:53-119) Length = 67 Score = 25.9 bits (57), Expect = 2.1 Identities = 8/27 (29%), Positives = 12/27 (44%) Query: 10 PKEGNQYRPLRKEVRNAFPKILKSIEK 36 K + P R +PKI++ IE Sbjct: 33 NKPPDGNAPPNSFYRALYPKIIQDIET 59 >2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier protein desaturase; electron transfer, four-helix bundle, oxidoreductase; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 1afr_A 2j2f_A (A:1-155) Length = 155 Score = 25.1 bits (55), Expect = 3.4 Identities = 6/21 (28%), Positives = 10/21 (47%) Query: 30 ILKSIEKALEPYVDPLIEPVE 50 I KS++ V ++ VE Sbjct: 14 IFKSLDDWARNNVLIHLKSVE 34 >2iew_A Inositol polyphosphate multikinase; ATP-grAsp fold related, transferase; 2.00A {Saccharomyces cerevisiae} PDB: 2if8_A* (A:122-363) Length = 242 Score = 24.0 bits (51), Expect = 8.0 Identities = 4/29 (13%), Positives = 7/29 (24%) Query: 53 KEGMVDEGYRLHICALIKLLENRSNHQTK 81 DE + L+ + H Sbjct: 212 PGKGYDENVIEGVETLLDIFMKFLEHHHH 240 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.315 0.137 0.398 Gapped Lambda K H 0.267 0.0649 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 746,439 Number of extensions: 29841 Number of successful extensions: 65 Number of sequences better than 10.0: 1 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 6 Length of query: 101 Length of database: 4,956,049 Length adjustment: 59 Effective length of query: 42 Effective length of database: 2,961,554 Effective search space: 124385268 Effective search space used: 124385268 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 50 (23.2 bits)