RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254781124|ref|YP_003065537.1| hypothetical protein
CLIBASIA_05130 [Candidatus Liberibacter asiaticus str. psy62]
         (101 letters)



>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens),
          s100a3 [TaxId: 9606]}
          Length = 93

 Score = 24.4 bits (53), Expect = 2.4
 Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 7  MYAPKEGNQYRPLRKEVRNAFPKILKSI--EKALEPYVDPLIEPVEIGKEGMVD 58
           YA + G++Y+  + E++    K L +    +  E   +  +  ++  K+  VD
Sbjct: 17 EYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVD 70


>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab
           (Tachypleus tridentatus) [TaxId: 6853]}
          Length = 235

 Score = 24.1 bits (52), Expect = 3.2
 Identities = 5/16 (31%), Positives = 10/16 (62%)

Query: 2   NPHGLMYAPKEGNQYR 17
           +P+G +YA  +   Y+
Sbjct: 95  DPNGYLYAVSKDKLYK 110


>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens),
          s100a6 [TaxId: 9606]}
          Length = 89

 Score = 23.7 bits (51), Expect = 4.2
 Identities = 12/52 (23%), Positives = 27/52 (51%)

Query: 7  MYAPKEGNQYRPLRKEVRNAFPKILKSIEKALEPYVDPLIEPVEIGKEGMVD 58
           Y+ +EG+++   +KE++    K L    K  +  +  L+E ++  K+  V+
Sbjct: 17 KYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVN 68


>d1ewfa1 d.83.1.1 (A:1-217) Bactericidal permeability-increasing
           protein, BPI {Human (Homo sapiens) [TaxId: 9606]}
          Length = 217

 Score = 23.4 bits (50), Expect = 5.0
 Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 17  RPLRKEVRNAF-PKILKSIEKALEPYVDPLIEPVEIGKEGMVD 58
             LR ++ +    K+  S+   L+PY   L    +I     ++
Sbjct: 164 SALRNKMNSQVCEKVTNSVSSELQPYFQTLPVMTKIDSVAGIN 206


>d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase
           {Flavobacterium meningosepticum, endoglycosidase F1
           [TaxId: 238]}
          Length = 285

 Score = 23.2 bits (49), Expect = 5.6
 Identities = 6/25 (24%), Positives = 9/25 (36%)

Query: 10  PKEGNQYRPLRKEVRNAFPKILKSI 34
               N    L  E + A P  L ++
Sbjct: 142 TPSNNAAARLAYETKQAMPNKLVTV 166


>d1afra_ a.25.1.2 (A:) delta 9-stearoyl-acyl carrier protein
          desaturase {Castor bean (Ricinus communis) [TaxId:
          3988]}
          Length = 345

 Score = 22.9 bits (49), Expect = 8.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)

Query: 30 ILKSIEKALEPYVDPLIEPVE 50
          I KS++   E  +   ++PVE
Sbjct: 21 IFKSLDNWAEENILVHLKPVE 41


>d1qbaa4 d.92.2.1 (A:201-337) Bacterial chitobiase, Domain 2
          {Serratia marcescens [TaxId: 615]}
          Length = 137

 Score = 22.4 bits (47), Expect = 9.9
 Identities = 14/69 (20%), Positives = 19/69 (27%), Gaps = 14/69 (20%)

Query: 11 KEGNQYRPLRKEVRNAFPKILKSIEKALEPYVDPL--------------IEPVEIGKEGM 56
          K   Q   LRK V      ++K     +      L              I+P +      
Sbjct: 25 KVHAQDADLRKGVALDLSTLVKPAADVVSQRFALLGVPVQTNGYPIKTDIQPGKFKGAMA 84

Query: 57 VDEGYRLHI 65
          V   Y L I
Sbjct: 85 VSGAYELKI 93


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.315    0.137    0.398 

Gapped
Lambda     K      H
   0.267   0.0499    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 373,014
Number of extensions: 16005
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 32
Number of HSP's successfully gapped: 12
Length of query: 101
Length of database: 2,407,596
Length adjustment: 62
Effective length of query: 39
Effective length of database: 1,556,336
Effective search space: 60697104
Effective search space used: 60697104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.4 bits)