RPS-BLAST 2.2.22 [Sep-27-2009]
Database: mmdb70
33,805 sequences; 4,956,049 total letters
Searching..................................................done
Query= gi|254781126|ref|YP_003065539.1| hypothetical protein
CLIBASIA_05140 [Candidatus Liberibacter asiaticus str. psy62]
(85 letters)
>1qs1_A ADP-ribosyltransferase; alpha-beta protein, binary toxin,
insecticial protein; 1.50A {Bacillus cereus} (A:271-462)
Length = 192
Score = 23.9 bits (51), Expect = 7.1
Identities = 5/50 (10%), Positives = 13/50 (26%)
Query: 11 LRALVFVITRGVARLPKDQKKAFFRHEKKVADHLNYNAGDRKSNIDKLYK 60
L A + I+ + + P + +R + +
Sbjct: 55 LDAQIKNISDALGKKPIPENITVYRWCGMPEFGYQISDPLPSLKDFEEQF 104
Database: mmdb70
Posted date: Jun 20, 2010 3:12 AM
Number of letters in database: 4,956,049
Number of sequences in database: 33,805
Lambda K H
0.325 0.136 0.389
Gapped
Lambda K H
0.267 0.0664 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 573,833
Number of extensions: 20768
Number of successful extensions: 67
Number of sequences better than 10.0: 1
Number of HSP's gapped: 67
Number of HSP's successfully gapped: 4
Length of query: 85
Length of database: 4,956,049
Length adjustment: 48
Effective length of query: 37
Effective length of database: 3,333,409
Effective search space: 123336133
Effective search space used: 123336133
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.2 bits)