BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781128|ref|YP_003065541.1| hypothetical protein
CLIBASIA_05150 [Candidatus Liberibacter asiaticus str. psy62]
         (225 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254781128|ref|YP_003065541.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040805|gb|ACT57601.1| hypothetical protein CLIBASIA_05150 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 225

 Score =  467 bits (1203), Expect = e-130,   Method: Composition-based stats.
 Identities = 225/225 (100%), Positives = 225/225 (100%)

Query: 1   MRDIRKIRNYFRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAA 60
           MRDIRKIRNYFRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAA
Sbjct: 1   MRDIRKIRNYFRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAA 60

Query: 61  DFSKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTL 120
           DFSKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTL
Sbjct: 61  DFSKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTL 120

Query: 121 LFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGV 180
           LFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGV
Sbjct: 121 LFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGV 180

Query: 181 GIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF 225
           GIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF
Sbjct: 181 GIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF 225


>gi|315122523|ref|YP_004063012.1| hypothetical protein CKC_03875 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495925|gb|ADR52524.1| hypothetical protein CKC_03875 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 229

 Score =  133 bits (334), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 93/235 (39%), Positives = 132/235 (56%), Gaps = 22/235 (9%)

Query: 2   RDIRKIRNYFRNTAKIILSGLFLGFFSSAAMADYGYSPQFQPTI-MVSNFAKFKGLYVAA 60
           +D RK    F   +K++ S LFLGFFSS+AMA       + P +   S+  K+KG Y++ 
Sbjct: 6   KDHRKSARIF---SKLLYSSLFLGFFSSSAMAANNSYEYYPPALNYQSSIPKWKGSYISV 62

Query: 61  DFSKI-----DHQSPVRLQNL--SLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDG 113
           D +       D    +R +++  +LN  + G D Q+GTLVYGAS+G E  H      ++ 
Sbjct: 63  DMANAALVGKDSVGIIRDRSVHAALNKFTFGFDSQEGTLVYGASIGYEN-HFTNGQIVNA 121

Query: 114 --DKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVES-ADTAKSTIRNIVA 170
                A +L+ R+GFTFDN NSS+ QNT+IYG  G R+R++ S++S AD  K  +     
Sbjct: 122 AFQNSAISLMLRSGFTFDNANSSLFQNTVIYGAVGVRLRDVSSLKSVADVLKLDLTK--- 178

Query: 171 NGFLDKVIGVGIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAGVVLRF 225
              LD+V  VGIEKKLASMLS+  EYR V   +    +S  +  G    G+ LRF
Sbjct: 179 ---LDQVYAVGIEKKLASMLSMHAEYRIVDSINSAMTLSNAK-TGRIVYGLSLRF 229


>gi|17987000|ref|NP_539634.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
           str. 16M]
 gi|17982651|gb|AAL51898.1| 22 kDa outer membrane protein precursor [Brucella melitensis bv. 1
           str. 16M]
          Length = 185

 Score = 47.3 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 19  WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 78

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+TFD         TL+YG  G  +    + ++  +A      
Sbjct: 79  HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGYGVTRFKAKDNTTSASGCEGG 130

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 131 V--------LIGAGVEQALSGPLSVKAEYDF 153


>gi|256113839|ref|ZP_05454632.1| hypothetical membrane protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265995187|ref|ZP_06107744.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
 gi|262766300|gb|EEZ12089.1| outer membrane protein [Brucella melitensis bv. 3 str. Ether]
          Length = 212

 Score = 46.9 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 46  WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+TFD         TL+YG  G  +    + ++  +A      
Sbjct: 106 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGYGVTRFKAKDNTTSASGCEGG 157

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180


>gi|225852776|ref|YP_002733009.1| hypothetical protein BMEA_A1331 [Brucella melitensis ATCC 23457]
 gi|256044924|ref|ZP_05447827.1| hypothetical membrane protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256263738|ref|ZP_05466270.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
 gi|260565476|ref|ZP_05835960.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
 gi|265991350|ref|ZP_06103907.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|225641141|gb|ACO01055.1| hypothetical membrane protein [Brucella melitensis ATCC 23457]
 gi|260151544|gb|EEW86638.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
 gi|263002134|gb|EEZ14709.1| outer membrane protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093797|gb|EEZ17802.1| outer membrane protein [Brucella melitensis bv. 2 str. 63/9]
 gi|326409306|gb|ADZ66371.1| conserved hypothetical protein [Brucella melitensis M28]
 gi|326539015|gb|ADZ87230.1| hypothetical membrane protein [Brucella melitensis M5-90]
          Length = 212

 Score = 46.9 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 46  WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+TFD         TL+YG  G  +    + ++  +A      
Sbjct: 106 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGYGVTRFKAKDNTTSASGCEGG 157

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180


>gi|237815697|ref|ZP_04594694.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|237788995|gb|EEP63206.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
          Length = 222

 Score = 46.9 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 56  WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 115

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+TFD         TL+YG  G  +    + ++  +A      
Sbjct: 116 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGYGVTRFKAKDNTTSASGWEGG 167

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 168 V--------LIGAGVEQALSGPLSVKAEYDF 190


>gi|62290190|ref|YP_221983.1| hypothetical protein BruAb1_1285 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700111|ref|YP_414685.1| hypothetical protein BAB1_1302 [Brucella melitensis biovar Abortus
           2308]
 gi|189024424|ref|YP_001935192.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
 gi|254689494|ref|ZP_05152748.1| hypothetical protein Babob68_04824 [Brucella abortus bv. 6 str.
           870]
 gi|254693981|ref|ZP_05155809.1| hypothetical protein Babob3T_04824 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254697632|ref|ZP_05159460.1| hypothetical protein Babob28_07971 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254730522|ref|ZP_05189100.1| hypothetical protein Babob42_04834 [Brucella abortus bv. 4 str.
           292]
 gi|256257742|ref|ZP_05463278.1| hypothetical protein Babob9C_10416 [Brucella abortus bv. 9 str.
           C68]
 gi|260546733|ref|ZP_05822472.1| outer membrane protein [Brucella abortus NCTC 8038]
 gi|260755016|ref|ZP_05867364.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
 gi|260758232|ref|ZP_05870580.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
 gi|260762059|ref|ZP_05874402.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884027|ref|ZP_05895641.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
 gi|261214272|ref|ZP_05928553.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
 gi|297248580|ref|ZP_06932298.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
 gi|14018349|emb|CAC38354.1| outer membrane protein [Brucella abortus]
 gi|46251261|gb|AAS84601.1| Omp22 [Brucella abortus]
 gi|62196322|gb|AAX74622.1| hypothetical membrane protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616212|emb|CAJ11258.1| membrane protein, putative [Brucella melitensis biovar Abortus
           2308]
 gi|189019996|gb|ACD72718.1| hypothetical protein BAbS19_I12150 [Brucella abortus S19]
 gi|260095783|gb|EEW79660.1| outer membrane protein [Brucella abortus NCTC 8038]
 gi|260668550|gb|EEX55490.1| outer membrane protein 22 [Brucella abortus bv. 4 str. 292]
 gi|260672491|gb|EEX59312.1| outer membrane protein 22 [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675124|gb|EEX61945.1| outer membrane protein 22 [Brucella abortus bv. 6 str. 870]
 gi|260873555|gb|EEX80624.1| outer membrane protein [Brucella abortus bv. 9 str. C68]
 gi|260915879|gb|EEX82740.1| outer membrane protein 22 [Brucella abortus bv. 3 str. Tulya]
 gi|297175749|gb|EFH35096.1| hypothetical protein BAYG_01539 [Brucella abortus bv. 5 str. B3196]
          Length = 212

 Score = 46.1 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 46  WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+TFD         TL+YG  G  +    + ++  +A      
Sbjct: 106 HGGTLQQSWNGNAKGKVGYTFD--------KTLVYGTAGYGVTRFKAKDNTTSASGWEGG 157

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180


>gi|254719331|ref|ZP_05181142.1| 22 kDa outer membrane protein precursor [Brucella sp. 83/13]
 gi|265984332|ref|ZP_06097067.1| outer membrane protein 22 [Brucella sp. 83/13]
 gi|306839106|ref|ZP_07471923.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
 gi|264662924|gb|EEZ33185.1| outer membrane protein 22 [Brucella sp. 83/13]
 gi|306405653|gb|EFM61915.1| 22 kDa outer membrane protein precursor [Brucella sp. NF 2653]
          Length = 212

 Score = 45.8 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 46  WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+ FD         TL+YG  G  +    + E+  +A      
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKENTTSAPGWEGG 157

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180


>gi|23502160|ref|NP_698287.1| hypothetical protein BR1284 [Brucella suis 1330]
 gi|163843547|ref|YP_001627951.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
 gi|254702018|ref|ZP_05163846.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 5 str.
           513]
 gi|254704559|ref|ZP_05166387.1| 22 kDa outer membrane protein precursor [Brucella suis bv. 3 str.
           686]
 gi|256369703|ref|YP_003107213.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
 gi|261752584|ref|ZP_05996293.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
 gi|261755243|ref|ZP_05998952.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
 gi|294852619|ref|ZP_06793292.1| outer membrane protein [Brucella sp. NVSL 07-0026]
 gi|23348124|gb|AAN30202.1| membrane protein, putative [Brucella suis 1330]
 gi|157310303|emb|CAN43863.1| outer membrane protein 22 [Brucella microti CCM 4915]
 gi|157310305|emb|CAN43864.1| outer membrane protein 22 [Brucella microti]
 gi|163674270|gb|ABY38381.1| 22 kDa outer membrane protein precursor [Brucella suis ATCC 23445]
 gi|255999865|gb|ACU48264.1| hypothetical protein BMI_I1295 [Brucella microti CCM 4915]
 gi|261742337|gb|EEY30263.1| outer membrane protein 22 [Brucella suis bv. 5 str. 513]
 gi|261744996|gb|EEY32922.1| outer membrane protein 22 [Brucella suis bv. 3 str. 686]
 gi|294821208|gb|EFG38207.1| outer membrane protein [Brucella sp. NVSL 07-0026]
          Length = 212

 Score = 44.2 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 46  WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+ FD         TL+YG  G  +    + ++  +A      
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180


>gi|161619235|ref|YP_001593122.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
 gi|260566198|ref|ZP_05836668.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
 gi|46251265|gb|AAS84603.1| Omp22 [Brucella canis]
 gi|161336046|gb|ABX62351.1| 22 kDa outer membrane protein precursor [Brucella canis ATCC 23365]
 gi|260155716|gb|EEW90796.1| outer membrane protein 22 [Brucella suis bv. 4 str. 40]
          Length = 212

 Score = 44.2 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 46  WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+ FD         TL+YG  G  +    + ++  +A      
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180


>gi|306840252|ref|ZP_07473026.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
 gi|306289779|gb|EFM60961.1| 22 kDa outer membrane protein precursor [Brucella sp. BO2]
          Length = 212

 Score = 44.2 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 46  WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+ FD         TL+YG  G  +    + ++  +A      
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180


>gi|306844187|ref|ZP_07476780.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
 gi|306275462|gb|EFM57199.1| 22 kDa outer membrane protein precursor [Brucella sp. BO1]
          Length = 212

 Score = 44.2 bits (103), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 46  WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+ FD         TL+YG  G  +    + ++  +A      
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180


>gi|254717240|ref|ZP_05179051.1| 22 kDa outer membrane protein precursor [Brucella ceti M13/05/1]
 gi|261219057|ref|ZP_05933338.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|260924146|gb|EEX90714.1| conserved hypothetical protein [Brucella ceti M13/05/1]
          Length = 221

 Score = 44.2 bits (103), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 56  WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 115

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+ FD         TL+YG  G  +    + ++  +A      
Sbjct: 116 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 167

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 168 V--------LIGAGVEQALSGPLSVKAEYDF 190


>gi|225627750|ref|ZP_03785787.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|225617755|gb|EEH14800.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
          Length = 222

 Score = 44.2 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 56  WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 115

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+ FD         TL+YG  G  +    + ++  +A      
Sbjct: 116 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 167

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 168 V--------LIGAGVEQALSGPLSVKAEYDF 190


>gi|254714341|ref|ZP_05176152.1| 22 kDa outer membrane protein precursor [Brucella ceti M644/93/1]
 gi|261322117|ref|ZP_05961314.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|261294807|gb|EEX98303.1| conserved hypothetical protein [Brucella ceti M644/93/1]
          Length = 222

 Score = 44.2 bits (103), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 56  WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 115

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+ FD         TL+YG  G  +    + ++  +A      
Sbjct: 116 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 167

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 168 V--------LIGAGVEQALSGPLSVKAEYDF 190


>gi|256061359|ref|ZP_05451503.1| 22 kDa outer membrane protein precursor [Brucella neotomae 5K33]
 gi|261325360|ref|ZP_05964557.1| Omp22 [Brucella neotomae 5K33]
 gi|46251267|gb|AAS84604.1| Omp22 [Brucella neotomae]
 gi|261301340|gb|EEY04837.1| Omp22 [Brucella neotomae 5K33]
          Length = 212

 Score = 43.8 bits (102), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 46  WSGNYVGAQVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+ FD         TL+YG  G  +    + ++  +A      
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180


>gi|254706545|ref|ZP_05168373.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
           M163/99/10]
 gi|256031839|ref|ZP_05445453.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
           M292/94/1]
 gi|256160030|ref|ZP_05457728.1| 22 kDa outer membrane protein precursor [Brucella ceti M490/95/1]
 gi|261314005|ref|ZP_05953202.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|265988937|ref|ZP_06101494.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
 gi|265998403|ref|ZP_06110960.1| Omp22 [Brucella ceti M490/95/1]
 gi|261303031|gb|EEY06528.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|262553010|gb|EEZ08861.1| Omp22 [Brucella ceti M490/95/1]
 gi|264661134|gb|EEZ31395.1| outer membrane protein 22 [Brucella pinnipedialis M292/94/1]
          Length = 211

 Score = 43.8 bits (102), Expect = 0.018,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 46  WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+ FD         TL+YG  G  +    + ++  +A      
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180


>gi|239832169|ref|ZP_04680498.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239824436|gb|EEQ96004.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 212

 Score = 43.8 bits (102), Expect = 0.019,   Method: Composition-based stats.
 Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 22/193 (11%)

Query: 12  RNTAKIILSGLFLGFFSSAAMADY-GYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQSP 70
           R+   + L    + F  SA  AD  G +       + S    + G Y+ A       + P
Sbjct: 4   RSITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVASGPHDWSGNYIGAQIGASSSKVP 63

Query: 71  VRLQNLS--LNGVSIGLDGQDGTLVYGASLG---VEGFHLEPRGGIDGDKVAGTLLFRTG 125
               N +  L GV +G + Q G +V+GA L     E  H    GG       G    + G
Sbjct: 64  GPFTNRTGALGGVVVGKNMQSGNVVFGAELEGNFAEAEHRIGHGGSLQQSWNGNAKGKVG 123

Query: 126 FTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKK 185
           + FD         TL+YG  G  +    + ++  +A          G L   IG G+E+ 
Sbjct: 124 YAFDK--------TLVYGTAGYGVTRFKAKDNTTSAPGW-----EGGAL---IGAGVEQA 167

Query: 186 LASMLSIRGEYRY 198
           L   LS++ EY +
Sbjct: 168 LTGPLSVKAEYDF 180


>gi|254710345|ref|ZP_05172156.1| 22 kDa outer membrane protein precursor [Brucella pinnipedialis
           B2/94]
 gi|256255239|ref|ZP_05460775.1| 22 kDa outer membrane protein precursor [Brucella ceti B1/94]
 gi|260168973|ref|ZP_05755784.1| 22 kDa outer membrane protein precursor [Brucella sp. F5/99]
 gi|261222435|ref|ZP_05936716.1| Omp22 [Brucella ceti B1/94]
 gi|261317908|ref|ZP_05957105.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261758466|ref|ZP_06002175.1| outer membrane protein [Brucella sp. F5/99]
 gi|46251269|gb|AAS84605.1| Omp22 [Brucella pinnipedialis]
 gi|46251271|gb|AAS84606.1| Omp22 [Brucella ceti]
 gi|46251273|gb|AAS84607.1| Omp22 [Brucella ceti]
 gi|260921019|gb|EEX87672.1| Omp22 [Brucella ceti B1/94]
 gi|261297131|gb|EEY00628.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261738450|gb|EEY26446.1| outer membrane protein [Brucella sp. F5/99]
          Length = 212

 Score = 43.8 bits (102), Expect = 0.020,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 21/151 (13%)

Query: 53  FKGLYVAADF--SKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEP 107
           + G YV A    S     SP   +  +L G+ +G + Q+G +V+GA L     E  H   
Sbjct: 46  WSGNYVGARVGGSSSKFPSPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIG 105

Query: 108 RGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRN 167
            GG       G    + G+ FD         TL+YG  G  +    + ++  +A      
Sbjct: 106 HGGTLQQSWNGNAKGKVGYAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGG 157

Query: 168 IVANGFLDKVIGVGIEKKLASMLSIRGEYRY 198
           +        +IG G+E+ L+  LS++ EY +
Sbjct: 158 V--------LIGAGVEQALSGPLSVKAEYDF 180


>gi|148559641|ref|YP_001259198.1| hypothetical protein BOV_1247 [Brucella ovis ATCC 25840]
 gi|46251263|gb|AAS84602.1| Omp22 [Brucella ovis]
 gi|148370898|gb|ABQ60877.1| putative membrane protein [Brucella ovis ATCC 25840]
          Length = 212

 Score = 43.4 bits (101), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 19/133 (14%)

Query: 69  SPVRLQNLSLNGVSIGLDGQDGTLVYGASLG---VEGFHLEPRGGIDGDKVAGTLLFRTG 125
           SP   +  +L G+ +G + Q+G +V+GA L     E  H    GG       G    + G
Sbjct: 64  SPFASRTGALGGIVVGKNMQNGNIVFGAELEGNFAEAEHRIGHGGTLQQSWNGNAKGKVG 123

Query: 126 FTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKK 185
           + FD         TL+YG  G  +    + ++  +A      +        +IG G+E+ 
Sbjct: 124 YAFD--------KTLVYGTAGYGVTRFKAKDNTTSAPGWEGGV--------LIGAGVEQA 167

Query: 186 LASMLSIRGEYRY 198
           L+  LS++ EY +
Sbjct: 168 LSGPLSVKAEYDF 180


>gi|114705635|ref|ZP_01438538.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
 gi|114538481|gb|EAU41602.1| outer membrane protein [Fulvimarina pelagi HTCC2506]
          Length = 228

 Score = 43.1 bits (100), Expect = 0.028,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 39/205 (19%)

Query: 39  PQFQPTIMVSNFAKFKGLYVAADFSKIDHQSPVRLQNLSLNGVS----IGLDGQDGTLVY 94
           P+  P + + +   + G +V  + S+ D+   +R  ++S +GV+     G + QDG+LVY
Sbjct: 45  PESAPPVAIWS-GPYAGTFVGYNVSRFDN---LRGASISGDGVAGGAYAGFNLQDGSLVY 100

Query: 95  G--ASLGVEGFHLEPR---GGID---GDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGG 146
           G    +G  GF    R   G +D      V G+L  R G   D          L+YG GG
Sbjct: 101 GVEGDVGGAGFDATRRNALGNLDLSGESNVFGSLRGRVGVDVDP--------FLVYGTGG 152

Query: 147 ARIRNI-MSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVACYDQP 205
             I    +S+     +++++      G+    IG G+E ++   +  R EYRY       
Sbjct: 153 LAIAETELSLGGVSDSEASV------GY---TIGAGVEAQVTDSIRTRLEYRYSDFGSSD 203

Query: 206 WDVSKWREKGDFT-----AGVVLRF 225
           +D+ +      F      AGV L F
Sbjct: 204 YDLGRTSVSSGFDEHSVRAGVSLNF 228


>gi|254470094|ref|ZP_05083498.1| outer membrane protein [Pseudovibrio sp. JE062]
 gi|211960405|gb|EEA95601.1| outer membrane protein [Pseudovibrio sp. JE062]
          Length = 221

 Score = 41.5 bits (96), Expect = 0.077,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 13/95 (13%)

Query: 136 LQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGE 195
           L  TL+YG GGA  +++ +  SA   + T     A G+   V+G G+E  +   L+ R E
Sbjct: 135 LDRTLVYGTGGAAFKDLTAKSSAGKDEKT-----AIGY---VVGAGVEHAVTDTLTARLE 186

Query: 196 YRYVACYDQPWDVSKWREKGDFT-----AGVVLRF 225
           Y Y    DQ +D     EK         AGV ++F
Sbjct: 187 YLYQDFGDQKFDFGGTTEKTKIDENLVRAGVSMKF 221


>gi|153009238|ref|YP_001370453.1| hypothetical protein Oant_1908 [Ochrobactrum anthropi ATCC 49188]
 gi|151561126|gb|ABS14624.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
          Length = 212

 Score = 40.4 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 75/193 (38%), Gaps = 22/193 (11%)

Query: 12  RNTAKIILSGLFLGFFSSAAMADY-GYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQSP 70
           R+   + L    + F  SA  AD  G +       + +    + G YV A       + P
Sbjct: 4   RSITAVALGAAIVAFAGSAFAADMMGATDYSYNDPVAAGPHDWSGNYVGAQVGASSSRVP 63

Query: 71  VRLQNLS--LNGVSIGLDGQDGTLVYGASLG---VEGFHLEPRGGIDGDKVAGTLLFRTG 125
               N +  L GV +G + Q G +V+G  L     E  H    GG       G    + G
Sbjct: 64  GPFTNRTGALGGVVVGKNMQSGNVVFGGELEGNFAEAEHRIGNGGSLQQSWNGNAKGKVG 123

Query: 126 FTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKK 185
           + FD         TL+YG  G  +    + ++  +A          G L   +G G+E+ 
Sbjct: 124 YAFDK--------TLVYGTAGYGVTRFKAKDNTTSAPGW-----EGGAL---VGAGVEQA 167

Query: 186 LASMLSIRGEYRY 198
           L+  LS++ EY +
Sbjct: 168 LSGPLSVKAEYDF 180


>gi|119383169|ref|YP_914225.1| outer membrane protein [Paracoccus denitrificans PD1222]
 gi|119372936|gb|ABL68529.1| outer membrane protein [Paracoccus denitrificans PD1222]
          Length = 255

 Score = 40.4 bits (93), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 25/134 (18%)

Query: 80  GVSIGLDGQDGTLVYGASLGVEG--------FHLEPRGGID-GDKVAGTLLFR--TGFTF 128
           G+ +G   Q    V+G  LG E         F  +  G  D   K+   L  R  TG+  
Sbjct: 97  GLHVGYRWQRDRWVFGPELGFEAGNIKDTITFDNQLGGSTDVSSKIRNVLALRLKTGY-- 154

Query: 129 DNNNSSILQNTLIYGFGG-ARIRNIMSVESADTAKSTI---RNIVANGFLDKVIGVGIEK 184
                ++  + L+YG  G AR      V   D +  ++   R+  +NG+   ++G+G+E+
Sbjct: 155 -----ALRPDLLLYGIAGIARADVEYKVAGTDGSGGSMSESRDFKSNGY---IVGLGVER 206

Query: 185 KLASMLSIRGEYRY 198
           KL+  +S+ GEY Y
Sbjct: 207 KLSDRMSVTGEYEY 220


>gi|13474724|ref|NP_106293.1| outer membrane protein [Mesorhizobium loti MAFF303099]
 gi|14025479|dbj|BAB52079.1| outer membrane protein [Mesorhizobium loti MAFF303099]
          Length = 205

 Score = 40.0 bits (92), Expect = 0.26,   Method: Composition-based stats.
 Identities = 54/195 (27%), Positives = 80/195 (41%), Gaps = 41/195 (21%)

Query: 17  IILSGLFLGFFSSAAMAD----YGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQSPVR 72
           +  +GL       A  AD    Y   P FQ +        + G++    F+ +   +P  
Sbjct: 9   VTAAGLAFCLLGPAMAADLSPTYNDPPAFQWS------GAYVGVHGGTAFTGM--PNPFA 60

Query: 73  LQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHL-----EPRGGIDGDKVAGTLLFRTGFT 127
            +N    GV  G + Q G  V GA   +EG +L     + +GG   +K  G    + G +
Sbjct: 61  GRNGFSGGVQAGYNQQMGPTVLGAE--IEGSYLGGAEHDVQGGKIKEKWRGAAKAKAGLS 118

Query: 128 FDNNNSSILQNTLIYGFGGARIRNIM---SVESADTAKSTIRNIVANGFLDKVIGVGIEK 184
           FD         TL++G GG  +       +V SAD  K         G+L   +G GIE+
Sbjct: 119 FDQ--------TLLFGTGGVALTKFDKGDNVSSADGWKV--------GYL---LGAGIEQ 159

Query: 185 KLASMLSIRGEYRYV 199
             A  LS + EY YV
Sbjct: 160 GFAGGLSAKVEYDYV 174


>gi|319785546|ref|YP_004145022.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317171434|gb|ADV14972.1| outer membrane protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 205

 Score = 40.0 bits (92), Expect = 0.27,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 79/196 (40%), Gaps = 37/196 (18%)

Query: 15  AKIIL--SGLFLGFFSSAAMAD----YGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQ 68
           AKIIL  S L +     A  AD    Y   P FQ +        + G++    F+ +   
Sbjct: 5   AKIILTASALAMCLLGPAMAADLSPAYNDPPAFQWS------GAYVGVHGGTAFTGM--P 56

Query: 69  SPVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHL-----EPRGGIDGDKVAGTLLFR 123
           +P   +N    G   G + Q G  V GA   +EG +L     + RGG   +K  G    +
Sbjct: 57  NPFAGRNGLSGGFQAGYNQQMGPAVLGAE--IEGSYLGGAEHDVRGGKIKEKWRGAAKAK 114

Query: 124 TGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIE 183
            G +FD         TL++G GG        V      K    N +    L  ++G GIE
Sbjct: 115 AGLSFDQ--------TLLFGTGG--------VAMTKFDKGDKVNGIDGWKLGYLVGGGIE 158

Query: 184 KKLASMLSIRGEYRYV 199
           +  A  LS + EY YV
Sbjct: 159 QGFAGGLSAKVEYDYV 174


>gi|71064914|ref|YP_263641.1| outer membrane protein [Psychrobacter arcticus 273-4]
 gi|71037899|gb|AAZ18207.1| probable outer membrane protein [Psychrobacter arcticus 273-4]
          Length = 394

 Score = 40.0 bits (92), Expect = 0.28,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 31/194 (15%)

Query: 15  AKIILSGLFLGFFSSAAMADYGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQSPVRLQ 74
           A + +S L LG+  S    D          +  S F K  GLY  A    I+     + Q
Sbjct: 22  AGVTISPLLLGYHYSEGADDEQVETTSPAGVGDSGFYKENGLYTGAALG-IELTPSTQFQ 80

Query: 75  NLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSS 134
                 V  G+   DG  V  AS   + F  E +  I G+ + GT  F TG+T DN    
Sbjct: 81  ------VEYGVSNTDG--VDPAS--TDSFDAE-QEMISGNFLIGTEQF-TGYT-DNK--- 124

Query: 135 ILQNTLIYGFGGARIR--NIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSI 192
            L+  ++ G G ++I+  N    E A+T K TI N+          G+G   ++   LS+
Sbjct: 125 -LKPYVLVGAGQSKIKIENAAGTEVAET-KDTIGNL----------GLGAMYRINDALSL 172

Query: 193 RGEYRYVACYDQPW 206
           RGE R +  +D  W
Sbjct: 173 RGEARAIHNFDNNW 186


>gi|13470965|ref|NP_102534.1| outer membrane protein [Mesorhizobium loti MAFF303099]
 gi|14021708|dbj|BAB48320.1| outer membrane protein [Mesorhizobium loti MAFF303099]
          Length = 226

 Score = 38.8 bits (89), Expect = 0.53,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 58/141 (41%), Gaps = 23/141 (16%)

Query: 78  LNGVSIGLDGQDGTLVYGASLGVEGFHL-----EPRGGIDGDKVA------GTLLFRTGF 126
           L GV IG + Q  + V G    V G  +     E   G+ GD+        GTL  R G+
Sbjct: 74  LGGVQIGYNYQINSAVLGVEADVSGADIKGHSDEITSGL-GDRYDTKVDWFGTLRARAGY 132

Query: 127 TFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKL 186
            FD         TLIYG GG    ++ +    D    T      N  +   IG G+E+ +
Sbjct: 133 AFDR--------TLIYGTGGLAFGSVEN-RYVDGPFDTFSE--KNTKVGWTIGAGLEQAI 181

Query: 187 ASMLSIRGEYRYVACYDQPWD 207
               S + EY+YV   DQ  D
Sbjct: 182 TDHWSAKFEYQYVDLRDQTID 202


>gi|148255740|ref|YP_001240325.1| putative outer-membrane protein [Bradyrhizobium sp. BTAi1]
 gi|146407913|gb|ABQ36419.1| putative outer-membrane protein, putative secreted protein
           [Bradyrhizobium sp. BTAi1]
          Length = 212

 Score = 38.4 bits (88), Expect = 0.78,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 67/173 (38%), Gaps = 31/173 (17%)

Query: 39  PQFQPTIMVSNFAKFKGLYVAADFSKIDHQSPVRLQNLSLNGVSIGLDGQDGTLVYG--- 95
           P +    +++    + G Y+ A     +  +          G ++G + Q G LV+G   
Sbjct: 27  PTYTKAPVLAPVQTWTGFYIGAFGGYANEDASTAALKGGFAGGTVGYNWQQGPLVFGLEA 86

Query: 96  --------ASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGG- 146
                   A++G+ G      G  D  +  GT+  R G+ FD          L+YG GG 
Sbjct: 87  DAAWADINATVGIPGVF----GLTDRIESTGTVRGRIGYAFDT--------VLLYGTGGY 134

Query: 147 ARIRNIMSVESADTAKSTIRNIVANGFLDK-VIGVGIEKKLASMLSIRGEYRY 198
           A   N +S      A S  +      FL     G G+E   A   S++GEY Y
Sbjct: 135 AWGNNKLSATVGGVAGSETK------FLSGWAAGAGVEWMFAPKWSLKGEYLY 181


>gi|13471424|ref|NP_102990.1| outer membrane protein [Mesorhizobium loti MAFF303099]
 gi|14022166|dbj|BAB48776.1| outer membrane protein [Mesorhizobium loti MAFF303099]
          Length = 225

 Score = 37.7 bits (86), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 12/76 (15%)

Query: 123 RTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGI 182
           R GF FD          LIYG GG    N    ++ D  +    +   NG+    IG G 
Sbjct: 130 RAGFAFDR--------VLIYGTGGYAYLN-GKADTRDVGRQESHSASFNGW---TIGAGA 177

Query: 183 EKKLASMLSIRGEYRY 198
           E  L   +++RGEYRY
Sbjct: 178 EYALTDNITVRGEYRY 193


>gi|145595862|ref|YP_001160159.1| methyltransferase type 12 [Salinispora tropica CNB-440]
 gi|145305199|gb|ABP55781.1| Methyltransferase type 12 [Salinispora tropica CNB-440]
          Length = 201

 Score = 37.7 bits (86), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 15/84 (17%)

Query: 151 NIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLS----------IRGEYRYVA 200
           N+M+  +A T    +R I A+   D VI VG        LS          +R E+R+  
Sbjct: 120 NVMTFVAAGTEAEVLRRIAAHLRPDGVIAVGFGTDRGYPLSAFDDDSAAAGLRREHRFAT 179

Query: 201 CYDQPWDVSKWREKGDFTAGVVLR 224
                WD+  WRE+ DF   ++ R
Sbjct: 180 -----WDLRPWREESDFAVTLLRR 198


>gi|332880571|ref|ZP_08448245.1| hypothetical protein HMPREF9074_04020 [Capnocytophaga sp. oral taxon
            329 str. F0087]
 gi|332681559|gb|EGJ54482.1| hypothetical protein HMPREF9074_04020 [Capnocytophaga sp. oral taxon
            329 str. F0087]
          Length = 3945

 Score = 36.5 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 90   GTLVYGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGF---GG 146
            G  V GAS+ V+GF +     ++G+ + GT +   G +     + IL NTL  G    G 
Sbjct: 3291 GVTVSGASV-VDGFEVSGTSSVEGNGILGTSILTAGASILVGTNGILYNTLADGATVNGE 3349

Query: 147  ARIRNIMSVESADTAKSTIRNIVANG 172
             +  N+  V S        +N+V NG
Sbjct: 3350 GKAVNVTVVNSGRLTTGQKQNVVQNG 3375


>gi|217977075|ref|YP_002361222.1| porin [Methylocella silvestris BL2]
 gi|217502451|gb|ACK49860.1| porin [Methylocella silvestris BL2]
          Length = 255

 Score = 36.5 bits (83), Expect = 3.0,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 22/131 (16%)

Query: 75  NLSLNGVSIGLDGQ-DGTLV---YGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDN 130
           NL LN   +GL+G  DGT +   Y  +  V GF +          + G++  R G+ +D 
Sbjct: 88  NLQLNQFVVGLEGSVDGTSLSKTYSGTAFVPGFGVAGINLHTSADIQGSIRGRVGYAWDR 147

Query: 131 NNSSILQNTLIYGFGG---ARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLA 187
                    L+Y  GG   A ++  +S   +  + ST +       +   +G G+E  + 
Sbjct: 148 --------VLVYATGGVAFAGVKASLSTPFSYDSSSTTK-------VGWTVGGGLEYAVT 192

Query: 188 SMLSIRGEYRY 198
           +  SIR EYRY
Sbjct: 193 NNWSIRAEYRY 203


>gi|46202723|ref|ZP_00052712.2| COG3659: Carbohydrate-selective porin [Magnetospirillum
           magnetotacticum MS-1]
          Length = 693

 Score = 36.1 bits (82), Expect = 3.6,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 32/150 (21%)

Query: 72  RLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLE-------PRGGIDG----------- 113
           R    +L G+  G   Q G  VYG    V+  +L+       P  G +G           
Sbjct: 77  RNATTALGGLFGGYAWQIGPFVYGVEADVDATNLKRPVSSTTPGFGFEGLDPAFPVIRAK 136

Query: 114 DKVAGTLLFRTGFTFDNNNSSILQNTLIY---GFGGARIRNIMSV-ESADTAKSTIRNIV 169
             V GT   R G+ F        +  L+Y   G  GA++R + +  + A T+   +R   
Sbjct: 137 ADVFGTARARVGYAF--------ERYLVYASFGLAGAQVRFLTNFPDPATTSAPALRR-- 186

Query: 170 ANGFLDKVIGVGIEKKLASMLSIRGEYRYV 199
              FL   +G GIE  +   L++  EYRY+
Sbjct: 187 GRAFLGFSLGAGIEYAITEHLALGLEYRYL 216


>gi|157821815|ref|NP_001101313.1| low density lipoprotein-related protein 1B (deleted in tumors)
           [Rattus norvegicus]
 gi|149047875|gb|EDM00491.1| low density lipoprotein-related protein 1B (deleted in tumors)
           (predicted) [Rattus norvegicus]
          Length = 2922

 Score = 35.7 bits (81), Expect = 4.5,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 26/144 (18%)

Query: 87  GQDGTLVYGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGG 146
           G +  L+Y    G+ G  LEPR  +D         F  G  F   N +I    +      
Sbjct: 643 GVESFLMYSVHEGIRGISLEPRDKVDALMPISGAAFAVGIDFHAENDTIYWTDM------ 696

Query: 147 ARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEK------------KLASMLSIRG 194
                +  +  A   ++   +IV NG L +V G+ I+              L  +  + G
Sbjct: 697 ----GLNKISRAKRDQTWKEDIVTNG-LGRVEGIAIDWIAGNIYWTDHGFNLIEVARLNG 751

Query: 195 EYRYVAC---YDQPWDVSKWREKG 215
            +RYV      DQP  ++   EKG
Sbjct: 752 SFRYVIISQGLDQPRSIAVHPEKG 775


>gi|222148166|ref|YP_002549123.1| outer membrane protein [Agrobacterium vitis S4]
 gi|221735154|gb|ACM36117.1| outer membrane protein [Agrobacterium vitis S4]
          Length = 212

 Score = 35.7 bits (81), Expect = 4.6,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 19/128 (14%)

Query: 84  GLDGQDGTLVYG--ASLGVEGFHLEPRGGIDGDK-VAGTLLFRTGFTFDNNNSSILQNTL 140
           G + Q+  +VYG  A +G +G       G++G + V G++  R G+         L   +
Sbjct: 79  GYNMQNDKIVYGGEADIGYDGNGSRSGAGLNGKQGVNGSIRGRVGYD--------LNPFM 130

Query: 141 IYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVA 200
           +YG  G        V +ADT  S      +   L   +G G+E  + + ++ R EYRY  
Sbjct: 131 VYGTAG--------VAAADTKISGAGGSDSKAALGYTVGAGVEAMVTNNITTRVEYRYTD 182

Query: 201 CYDQPWDV 208
             ++ +++
Sbjct: 183 YQNKDYNI 190


>gi|222085476|ref|YP_002544006.1| outer membrane protein [Agrobacterium radiobacter K84]
 gi|221722924|gb|ACM26080.1| outer membrane protein [Agrobacterium radiobacter K84]
          Length = 210

 Score = 35.7 bits (81), Expect = 5.2,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 24/140 (17%)

Query: 84  GLDGQDGTLVYG--ASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLI 141
           G + Q G +VYG  A LG  G      G    + V G++  R G+ F+          ++
Sbjct: 78  GYNWQQGQIVYGVEADLGYAGIDSTRNGLTAKNGVNGSVRGRLGYDFNP--------FML 129

Query: 142 YGFGGARI-RNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVA 200
           YG  G  I +N +S +++  +K+ +      G+    +G G E  + + ++ R EYRY  
Sbjct: 130 YGTAGLAIGQNKLSDDTSSDSKTAV------GY---TVGAGAETFITNNVTARLEYRYTD 180

Query: 201 CYDQPWDVSKWREKGDFTAG 220
              + +D+    + G+F+ G
Sbjct: 181 YGKKNFDL----DSGNFSRG 196


>gi|227821981|ref|YP_002825952.1| outer membrane protein [Sinorhizobium fredii NGR234]
 gi|227340981|gb|ACP25199.1| outer membrane protein [Sinorhizobium fredii NGR234]
          Length = 216

 Score = 35.4 bits (80), Expect = 6.8,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 17/115 (14%)

Query: 113 GDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGG-ARIRNIMSVESADTAKSTIRNIVAN 171
           G  V+G++  R G+T +       +  L+YG GG A  R  + V  A   K T      N
Sbjct: 117 GTDVSGSVRGRVGYTLN-------EKALLYGTGGWAVTRGFVDVAGAPKEKETF-----N 164

Query: 172 GFLDKVIGVGIEKKLASMLSIRGEYRYVACYDQP-WDVSKWREKGDFTAGVVLRF 225
           G+    IG GI+    + +  R EYRY    D+    V    ++  FT GV ++F
Sbjct: 165 GW---TIGGGIDYAFTNSMFGRAEYRYNDFGDKDVGGVDVDLDQHQFTVGVGVKF 216


>gi|110632458|ref|YP_672666.1| outer membrane protein, 31 kDa [Mesorhizobium sp. BNC1]
 gi|110283442|gb|ABG61501.1| outer membrane protein, 31 kDa [Chelativorans sp. BNC1]
          Length = 237

 Score = 35.4 bits (80), Expect = 6.8,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 28/137 (20%)

Query: 77  SLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGG--IDGDKVA---------GTLLFRTG 125
           ++ G+ +G D Q    V GA   +   + E +    + G ++A         GT+  R G
Sbjct: 83  AIGGIQVGYDWQVNNWVLGAVADIAATNYEVKNSYYVLGTRIAKDSSKLSYLGTVRARAG 142

Query: 126 FTFDNNNSSILQNTLIYGFGG---ARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGI 182
           + +D         TL+YG GG    + +        DT K   ++    G+    IG G+
Sbjct: 143 YAWDR--------TLVYGHGGFAYGKTKQTSDFIGTDTLK---QSQTRTGW---TIGAGV 188

Query: 183 EKKLASMLSIRGEYRYV 199
           E  +   +S+  EY YV
Sbjct: 189 EYAVTDRISLGSEYSYV 205


>gi|218675314|ref|ZP_03524983.1| outer membrane protein [Rhizobium etli GR56]
          Length = 211

 Score = 35.0 bits (79), Expect = 7.6,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 24/143 (16%)

Query: 81  VSIGLDGQDGTLVYG--ASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQN 138
           V  G + Q G +VYG  + LG  G  +   G  +     G++  R G+         +  
Sbjct: 76  VFTGYNWQQGQIVYGVESDLGYSGDDVSSGGVKNKYGWNGSVRGRVGYD--------MNP 127

Query: 139 TLIYGFGGARIRNI-MSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYR 197
            L+YG  G  + NI +S +++D +K+      A G+    +G G+E  + + ++ R EYR
Sbjct: 128 FLLYGTAGLALGNIKVSDDTSDESKT------AYGY---TVGAGVEAFVTNNITTRLEYR 178

Query: 198 YVACYDQPWDVSKWREKGDFTAG 220
           Y     + +D+    + G F+ G
Sbjct: 179 YTDYQSKDYDL----DSGSFSRG 197


>gi|159185257|ref|NP_355480.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
 gi|159140518|gb|AAK88265.2| outer membrane protein [Agrobacterium tumefaciens str. C58]
          Length = 209

 Score = 35.0 bits (79), Expect = 8.6,   Method: Composition-based stats.
 Identities = 52/190 (27%), Positives = 73/190 (38%), Gaps = 25/190 (13%)

Query: 34  DYGYSPQFQPTIMVSNFAKFKGLYVAADFSKIDHQ-SPVRLQNLSLNGVSIGLDGQDGTL 92
           DYG  P F           + G YV A       + SP+        GV  G + Q G+ 
Sbjct: 36  DYGNQPAFS----------WSGAYVGAHGGVASPKFSPLASGRGLTGGVQAGYNFQFGSG 85

Query: 93  VYGASLGVEGFHLEPRGGIDGDKVAGTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNI 152
           V GA   VEG +L    G D     G L  R            L +TL+YG  G     +
Sbjct: 86  VVGAE--VEGSYL----GNDARVPNGRLRERFRGAAKLKAGVALDHTLLYGTAG-----L 134

Query: 153 MSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYRYVACYDQPWDVSKWR 212
            + +  D    T  +    G+L   +G G+E+     LS + EY YV+  +     S  R
Sbjct: 135 TTTKFKDGNGVTGPDGWKQGYL---VGAGVEQSFGGGLSAKFEYNYVSTGNVATTTSSGR 191

Query: 213 EKGDFTAGVV 222
            K D +  V+
Sbjct: 192 SKTDVSDHVI 201


>gi|299148467|ref|ZP_07041529.1| putative outer membrane protein, probably involved in nutrient
           binding [Bacteroides sp. 3_1_23]
 gi|298513228|gb|EFI37115.1| putative outer membrane protein, probably involved in nutrient
           binding [Bacteroides sp. 3_1_23]
          Length = 1016

 Score = 35.0 bits (79), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 70  PVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGD 114
           PVR QN   N + I +D + G  VYGAS+ VEG  +E R   D D
Sbjct: 18  PVRAQNTDNNIIGIVVD-KSGNPVYGASVNVEGGAVETRVETDKD 61


>gi|298482109|ref|ZP_07000297.1| outer membrane protein [Bacteroides sp. D22]
 gi|298271666|gb|EFI13239.1| outer membrane protein [Bacteroides sp. D22]
          Length = 1019

 Score = 35.0 bits (79), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 70  PVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGD 114
           PVR QN   N + I +D + G  VYGAS+ VEG  +E R   D D
Sbjct: 21  PVRAQNTDNNIIGIVVD-KSGNPVYGASVNVEGGAVETRVETDKD 64


>gi|295086713|emb|CBK68236.1| TonB-dependent Receptor Plug Domain./TonB dependent receptor.
           [Bacteroides xylanisolvens XB1A]
          Length = 1016

 Score = 35.0 bits (79), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 70  PVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGD 114
           PVR QN   N + I +D + G  VYGAS+ VEG  +E R   D D
Sbjct: 18  PVRAQNTDNNIIGIVVD-KSGNPVYGASVNVEGGAVETRVETDKD 61


>gi|294643109|ref|ZP_06720943.1| TonB-dependent receptor plug domain protein [Bacteroides ovatus SD
           CC 2a]
 gi|294808943|ref|ZP_06767667.1| TonB-dependent receptor plug domain protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|292641568|gb|EFF59752.1| TonB-dependent receptor plug domain protein [Bacteroides ovatus SD
           CC 2a]
 gi|294443824|gb|EFG12567.1| TonB-dependent receptor plug domain protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 1019

 Score = 35.0 bits (79), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 70  PVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGD 114
           PVR QN   N + I +D + G  VYGAS+ VEG  +E R   D D
Sbjct: 21  PVRAQNTDNNIIGIVVD-KSGNPVYGASVNVEGGAVETRVETDKD 64


>gi|293369320|ref|ZP_06615905.1| TonB-dependent receptor plug domain protein [Bacteroides ovatus SD
           CMC 3f]
 gi|292635487|gb|EFF53994.1| TonB-dependent receptor plug domain protein [Bacteroides ovatus SD
           CMC 3f]
          Length = 1019

 Score = 35.0 bits (79), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 70  PVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGD 114
           PVR QN   N + I +D + G  VYGAS+ VEG  +E R   D D
Sbjct: 21  PVRAQNTDNNIIGIVVD-KSGNPVYGASVNVEGGAVETRVETDKD 64


>gi|262408417|ref|ZP_06084964.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|262353969|gb|EEZ03062.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
          Length = 1016

 Score = 35.0 bits (79), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 70  PVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGD 114
           PVR QN   N + I +D + G  VYGAS+ VEG  +E R   D D
Sbjct: 18  PVRAQNTDNNIIGIVVD-KSGNPVYGASVNVEGGAVETRVETDKD 61


>gi|237721234|ref|ZP_04551715.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. 2_2_4]
 gi|229449030|gb|EEO54821.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides
           sp. 2_2_4]
          Length = 492

 Score = 35.0 bits (79), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 70  PVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGD 114
           PVR QN   N + I +D + G  VYGAS+ VEG  +E R   D D
Sbjct: 18  PVRAQNTDNNIIGIVVD-KSGNPVYGASVNVEGGAVETRVETDKD 61


>gi|160886950|ref|ZP_02067953.1| hypothetical protein BACOVA_04964 [Bacteroides ovatus ATCC 8483]
 gi|156107361|gb|EDO09106.1| hypothetical protein BACOVA_04964 [Bacteroides ovatus ATCC 8483]
          Length = 1016

 Score = 35.0 bits (79), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 70  PVRLQNLSLNGVSIGLDGQDGTLVYGASLGVEGFHLEPRGGIDGD 114
           PVR QN   N + I +D + G  VYGAS+ VEG  +E R   D D
Sbjct: 18  PVRAQNTDNNIIGIVVD-KSGNPVYGASVNVEGGAVETRVETDKD 61


>gi|254511265|ref|ZP_05123332.1| pe-pgrs family protein [Rhodobacteraceae bacterium KLH11]
 gi|221534976|gb|EEE37964.1| pe-pgrs family protein [Rhodobacteraceae bacterium KLH11]
          Length = 816

 Score = 35.0 bits (79), Expect = 9.0,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 13/90 (14%)

Query: 61  DFSKIDHQSPVRLQNLSLNGVSIGLDG----QDGTLVYGASLGVEGFHLEPRGGIDGDKV 116
           DFS I++Q+     N SL+GVS+  DG    Q G    G++   EG   E  GG  G   
Sbjct: 168 DFSSINNQAATLNDNDSLSGVSLSNDGGTFTQSGNATGGSAHAEEGIDAEADGGASG--- 224

Query: 117 AGTLLFRTGFTFDNNNSSILQNTLIYGFGG 146
                 + G ++  N S     +    FGG
Sbjct: 225 ------QGGMSYGGNASGGTHGSNALAFGG 248


>gi|159479912|ref|XP_001698030.1| hypothetical protein CHLREDRAFT_176872 [Chlamydomonas reinhardtii]
 gi|158273829|gb|EDO99615.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 338

 Score = 34.6 bits (78), Expect = 9.2,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 140 LIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKVIGVGIEKKLASMLSIRGEYR-Y 198
           ++Y  GGA +++I  + S   A +T+      GF D ++GVG    LA+    RGE+R Y
Sbjct: 63  VVYTTGGA-VQSISWLLSVPGASATVLEAAVPGFGDGIVGVGATCALATFPLKRGEHRAY 121

Query: 199 VACY 202
           VA +
Sbjct: 122 VAVH 125


>gi|222082486|ref|YP_002541851.1| outer membrane protein [Agrobacterium radiobacter K84]
 gi|221727165|gb|ACM30254.1| outer membrane protein [Agrobacterium radiobacter K84]
          Length = 230

 Score = 34.6 bits (78), Expect = 9.6,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 24/103 (23%)

Query: 118 GTLLFRTGFTFDNNNSSILQNTLIYGFGGARIRNIMSVESADTAKSTIRNIVANGFLDKV 177
           GTL  R G+ +DN        TL YG GG    +I    S D   S   +    G+   V
Sbjct: 129 GTLRPRVGYAYDN--------TLFYGTGGLAYGHIDYKGSLDGVGSFSEDKTKAGW---V 177

Query: 178 IGVGIEKKLASMLSIRGEYRYVACYDQPWDVSKWREKGDFTAG 220
           +G G+E      ++ + EY+YV             + G FTAG
Sbjct: 178 LGAGVEHAFTDNVTAKLEYQYV-------------DFGSFTAG 207


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.322    0.140    0.412 

Lambda     K      H
   0.267   0.0460    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,768,259,486
Number of Sequences: 14124377
Number of extensions: 137850926
Number of successful extensions: 244756
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 244719
Number of HSP's gapped (non-prelim): 101
length of query: 225
length of database: 4,842,793,630
effective HSP length: 134
effective length of query: 91
effective length of database: 2,950,127,112
effective search space: 268461567192
effective search space used: 268461567192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (34.9 bits)