HHsearch alignment for GI: 254781130 and conserved domain: pfam03962
>pfam03962 Mnd1 Mnd1 family. This family of proteins includes MND1 from S. cerevisiae. The mnd1 protein forms a complex with hop2 to promote homologous chromosome pairing and meiotic double-strand break repair.
Probab=94.67 E-value=0.21 Score=30.92 Aligned_cols=64 Identities=23% Similarity=0.376 Sum_probs=45.7
Q ss_pred EEEEEHHHHHHHHHHHEEC---------CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2325578887663344106---------766031367775999999999999999999999999999999999
Q gi|254781130|r 302 LIGFSENNLKEINEVFVDT---------IGGYLAPNPSVIIPHLAKAIQELLQEVKELRDMIDKQNEEHQDVQ 365 (378)
Q Consensus 302 ~~G~iAqev~~v~p~~v~~---------~~~~~~~~~~~l~~~li~aiqel~~~i~~l~~~i~~~~~~~~~l~ 365 (378)
T Consensus 24 ~~gI~~~~VKdvlQ~LvDDglV~~eKiGtsn~yWsFps~~~~~~~~~~~~L~~~~~~~~~~i~~l~~~i~~~k 96 (188)
T pfam03962 24 VKGISSMSVKEVLQSLVDDGLVRVEKIGTSNYYWSFPSQAKNKLKTRLEKLKKELEELKQRIAELQAQIEKLK 96 (188)
T ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 3597553499999998556873020027723676586799999999999999999999999999999999998