HHsearch results for GI: 254781130 and protein with PDBid: 1nkp_A
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=92.89 E-value=0.52 Score=26.24 Aligned_cols=60 Identities=12% Similarity=0.072 Sum_probs=46.2
Q ss_pred HHHHHHHHHHEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8887663344106766031367775999999999999999999999999999999999998755
Q gi|254781130|r 308 NNLKEINEVFVDTIGGYLAPNPSVIIPHLAKAIQELLQEVKELRDMIDKQNEEHQDVQDMSNTP 371 (378)
Q Consensus 308 qev~~v~p~~v~~~~~~~~~~~~~l~~~li~aiqel~~~i~~l~~~i~~~~~~~~~l~~~~~~~ 371 (378)
.++..++|..-.. .-++-..+.-..++-|+.|.++++.|+.+++.+.+++..|+++++.+
T Consensus 26 ~~Lr~llP~~~~~----~k~sK~~IL~~Ai~yI~~L~~~~~~l~~~~~~L~~~~~~L~~~l~~L 85 (88)
T 1nkp_A 26 FALRDQIPELENN----EKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHTTCGGGTTC----TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999877898888----85679999999999999999999999999999999999999999975