HHsearch results for GI: 254781130 and protein with PDBid: 1nkp_A

>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=92.89  E-value=0.52  Score=26.24  Aligned_cols=60  Identities=12%  Similarity=0.072  Sum_probs=46.2

Q ss_pred             HHHHHHHHHHEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8887663344106766031367775999999999999999999999999999999999998755
Q gi|254781130|r  308 NNLKEINEVFVDTIGGYLAPNPSVIIPHLAKAIQELLQEVKELRDMIDKQNEEHQDVQDMSNTP  371 (378)
Q Consensus       308 qev~~v~p~~v~~~~~~~~~~~~~l~~~li~aiqel~~~i~~l~~~i~~~~~~~~~l~~~~~~~  371 (378)
                      .++..++|..-..    .-++-..+.-..++-|+.|.++++.|+.+++.+.+++..|+++++.+
T Consensus        26 ~~Lr~llP~~~~~----~k~sK~~IL~~Ai~yI~~L~~~~~~l~~~~~~L~~~~~~L~~~l~~L   85 (88)
T 1nkp_A           26 FALRDQIPELENN----EKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL   85 (88)
T ss_dssp             HHHHTTCGGGTTC----TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999877898888----85679999999999999999999999999999999999999999975