HHsearch results for GI: 254781130 and protein with PDBid: 1nlw_A

>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1

Probab=91.57  E-value=0.63  Score=25.58  Aligned_cols=59  Identities=14%  Similarity=0.143  Sum_probs=43.0

Q ss_pred             HHHHHHHHHEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             887663344106766031367775999999999999999999999999999999999998755
Q gi|254781130|r  309 NLKEINEVFVDTIGGYLAPNPSVIIPHLAKAIQELLQEVKELRDMIDKQNEEHQDVQDMSNTP  371 (378)
Q Consensus       309 ev~~v~p~~v~~~~~~~~~~~~~l~~~li~aiqel~~~i~~l~~~i~~~~~~~~~l~~~~~~~  371 (378)
                      ++..++|.....    .-++...+.--.++=|++|..+++.|+.+++.+..+.+.|+..++.|
T Consensus        22 ~L~~llP~~~~~----~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~L~~~~~~L~~~l~~L   80 (80)
T 1nlw_A           22 KLKGLVPLGPDS----SRHTTLSLLTKAKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQLEKL   80 (80)
T ss_dssp             HHHHSSCCCSSS----CCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999766457666----76789999999999999999999999999999999999999998629