RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254781131|ref|YP_003065544.1| hypothetical protein CLIBASIA_05165 [Candidatus Liberibacter asiaticus str. psy62] (150 letters) >3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F} (A:109-200,A:241-275) Length = 127 Score = 55.4 bits (133), Expect = 4e-09 Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 16/75 (21%) Query: 75 SDRRMKCNVKPVAN----------LYQYRYLSDPK-----NVQRIGVIAQEISKIRPDTV 119 ++ K + Y++L + GVIAQ+I + Sbjct: 14 ANGERKTEPVVFDDAFLDAWGDVHYIMYQWLDAVQLKGNDARIHFGVIAQQIRDVFIAHG 73 Query: 120 VENNQGIKSVDYGRL 134 + ++ + Y L Sbjct: 74 LM-DENSTNCRYAVL 87 >3gud_A NECK appendage protein; 3-helix bundle, chaperon, chaperone; HET: PEG; 2.20A {Bacillus phage ga-1} (A:) Length = 129 Score = 36.2 bits (83), Expect = 0.002 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 15/62 (24%) Query: 75 SDRRMKCNVKPVAN----------LYQYRYLSD-----PKNVQRIGVIAQEISKIRPDTV 119 SD R K ++ P+++ YQY++ + GVIAQ+I K+ D Sbjct: 1 SDERHKTDIAPISDKVLDAWEKVKFYQYKFKDAVDEKGEEARYHFGVIAQQIVKVFEDEG 60 Query: 120 VE 121 + Sbjct: 61 LS 62 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.316 0.133 0.371 Gapped Lambda K H 0.267 0.0570 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 1,057,820 Number of extensions: 43356 Number of successful extensions: 57 Number of sequences better than 10.0: 1 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 2 Length of query: 150 Length of database: 4,956,049 Length adjustment: 81 Effective length of query: 69 Effective length of database: 2,217,844 Effective search space: 153031236 Effective search space used: 153031236 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 50 (23.4 bits)