RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254781131|ref|YP_003065544.1| hypothetical protein
CLIBASIA_05165 [Candidatus Liberibacter asiaticus str. psy62]
         (150 letters)



>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain
           {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 122

 Score = 25.8 bits (57), Expect = 1.7
 Identities = 2/19 (10%), Positives = 7/19 (36%)

Query: 95  LSDPKNVQRIGVIAQEISK 113
           + +  N   +  + Q+   
Sbjct: 41  IFEHNNKTELLSLIQDFIG 59


>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI
           {Streptomyces clavuligerus [TaxId: 1901]}
          Length = 232

 Score = 25.5 bits (55), Expect = 2.3
 Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 88  NLYQYRYLSDP--KNVQRIGVIAQEISKIRPDTVVE 121
           +   Y++      K+     V    + ++RP T+VE
Sbjct: 51  DFSPYQWRGLRMLKDPDTQAVYHDMLWELRPRTIVE 86


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.133    0.371 

Gapped
Lambda     K      H
   0.267   0.0516    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 525,711
Number of extensions: 22756
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 3
Length of query: 150
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 72
Effective length of database: 1,336,656
Effective search space: 96239232
Effective search space used: 96239232
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.2 bits)