RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254781131|ref|YP_003065544.1| hypothetical protein CLIBASIA_05165 [Candidatus Liberibacter asiaticus str. psy62] (150 letters) >d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 122 Score = 25.8 bits (57), Expect = 1.7 Identities = 2/19 (10%), Positives = 7/19 (36%) Query: 95 LSDPKNVQRIGVIAQEISK 113 + + N + + Q+ Sbjct: 41 IFEHNNKTELLSLIQDFIG 59 >d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI {Streptomyces clavuligerus [TaxId: 1901]} Length = 232 Score = 25.5 bits (55), Expect = 2.3 Identities = 8/36 (22%), Positives = 16/36 (44%), Gaps = 2/36 (5%) Query: 88 NLYQYRYLSDP--KNVQRIGVIAQEISKIRPDTVVE 121 + Y++ K+ V + ++RP T+VE Sbjct: 51 DFSPYQWRGLRMLKDPDTQAVYHDMLWELRPRTIVE 86 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.316 0.133 0.371 Gapped Lambda K H 0.267 0.0516 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 525,711 Number of extensions: 22756 Number of successful extensions: 22 Number of sequences better than 10.0: 1 Number of HSP's gapped: 22 Number of HSP's successfully gapped: 3 Length of query: 150 Length of database: 2,407,596 Length adjustment: 78 Effective length of query: 72 Effective length of database: 1,336,656 Effective search space: 96239232 Effective search space used: 96239232 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 49 (23.2 bits)