HHsearch alignment for GI: 254781133 and conserved domain: COG3981

Probab=98.93  E-value=1.8e-08  Score=68.51  Aligned_cols=111  Identities=11%  Similarity=0.083  Sum_probs=80.7

Q ss_pred             HHHHHHHHHHHHHCCCCC--C-----CCEEEEEECCCCEEEEEEEEEEE-ECC--CCCCCEEEECC---CCCCHHHHHHH
Q ss_conf             899999999972001148--7-----85499998257607679999998-346--78311368637---76603599999
Q gi|254781133|r   18 NQIIADFVAKRIKDCSSG--W-----DRFVSMGILKSNFLVAGIIYHNY-CPI--SRVIELSGASD---CKSWLSRSVLK   84 (159)
Q Consensus        18 ~e~~~~wi~~~~~~~~~~--~-----~~~~ai~i~~~g~lvG~v~l~~~-~~~--~~~~eig~~~~---~~~~~~~ea~~   84 (159)
T Consensus        42 ~~~fed~L~~~-~~~~~~~~~~~g~V~~~~y~~v~~d~~ivG~i~lRh~Ln~~ll~~gGHIGY~VrPseR~KGYA~emLk  120 (174)
T COG3981          42 QEDFEDWLEDL-TRQEPGNNLPEGWVPASTYWAVDEDGQIVGFINLRHQLNDFLLEEGGHIGYSVRPSERRKGYAKEMLK  120 (174)
T ss_pred             CCCHHHHHHHH-HCCCCCCCCCCCCEECEEEEEEECCCCEEEEEEEEEECCHHHHHCCCCCCCEECHHHHCCCHHHHHHH
T ss_conf             30099999998-60277868999803033689993388089999862100568886278564114763524678999999


Q ss_pred             HHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCCC
Q ss_conf             9999862486507999998264215899998749589667612894
Q gi|254781133|r   85 EIYSYPWNQLCCQAVIHRIPDEDYPQHRMLTSLGGIRYRIPRLRGR  130 (159)
Q Consensus        85 ~l~~~aF~~l~l~Ri~~~~~~~N~~S~rv~eklGF~~egv~R~~G~  130 (159)
T Consensus       121 l~L~~a-r~lgi~~Vlvtcd~dN~ASrkvI~~NGGile~~~~~~g~  165 (174)
T COG3981         121 LALEKA-RELGIKKVLVTCDKDNIASRKVIEANGGILENEFFGEGK  165 (174)
T ss_pred             HHHHHH-HHCCCCEEEEEECCCCCHHHHHHHHCCCEEEEEECCCCC
T ss_conf             999999-984997699984799811167787538788677714885