HHsearch alignment for GI: 254781133 and conserved domain: KOG3396
>KOG3396 consensus.
Probab=97.09 E-value=0.0038 Score=37.84 Aligned_cols=102 Identities=12% Similarity=0.005 Sum_probs=65.9
Q ss_pred CCHHHHHHHHHHHHHCCCCCC-CCEEEEEECCCCEEEEEEEEEEEEC------CCCCCC-EEEEC-CCCCCHHHHHHHHH
Q ss_conf 998999999999720011487-8549999825760767999999834------678311-36863-77660359999999
Q gi|254781133|r 16 RINQIIADFVAKRIKDCSSGW-DRFVSMGILKSNFLVAGIIYHNYCP------ISRVIE-LSGAS-DCKSWLSRSVLKEI 86 (159)
Q Consensus 16 ~t~e~~~~wi~~~~~~~~~~~-~~~~ai~i~~~g~lvG~v~l~~~~~------~~~~~e-ig~~~-~~~~~~~~ea~~~l 86 (159)
T Consensus 34 vt~e~F~krf~~m---k~~~~~Y~i~Vied~~s~~vigtatL~IE~KfIh~~g~rGhiEDVVV~~~~rgk~LGkllv~~L 110 (150)
T KOG3396 34 VTREQFEKRFEAM---KKSGDWYYIVVIEDKESEKVIGTATLFIERKFIHGCGSRGHIEDVVVDSEYRGKQLGKLLVETL 110 (150)
T ss_pred CCHHHHHHHHHHH---HHCCCCEEEEEEEECCCCEEEEEEEEEEEHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHH
T ss_conf 3799999999999---8538967999999678672788877777666665044457514798675451567869999999
Q ss_pred HHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEE
Q ss_conf 99862486507999998264215899998749589667
Q gi|254781133|r 87 YSYPWNQLCCQAVIHRIPDEDYPQHRMLTSLGGIRYRI 124 (159)
Q Consensus 87 ~~~aF~~l~l~Ri~~~~~~~N~~S~rv~eklGF~~egv 124 (159)
T Consensus 111 v~l~k~-lgcYKi~LdC~~~n---v~FYeKcG~s~~~~ 144 (150)
T KOG3396 111 VDLAKS-LGCYKIILDCDPKN---VKFYEKCGYSNAGN 144 (150)
T ss_pred HHHHHH-CCCEEEEEECCHHH---HHHHHHCCCCCCCH
T ss_conf 999874-28279999636210---14899739655420