HHsearch results for GI: 254781133 and protein with PDBid: 1vkc_A

>1vkc_A Putative acetyl transferase; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1
Probab=98.78  E-value=5.1e-08  Score=64.66  Aligned_cols=100  Identities=5%  Similarity=0.033  Sum_probs=67.9

Q ss_pred             HHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCC---CCCCE---EEE-CCCCCCHHHHHHHHHHHHHH
Q ss_conf             999999999720011487854999982576076799999983467---83113---686-37766035999999999862
Q gi|254781133|r   19 QIIADFVAKRIKDCSSGWDRFVSMGILKSNFLVAGIIYHNYCPIS---RVIEL---SGA-SDCKSWLSRSVLKEIYSYPW   91 (159)
Q Consensus        19 e~~~~wi~~~~~~~~~~~~~~~ai~i~~~g~lvG~v~l~~~~~~~---~~~ei---g~~-~~~~~~~~~ea~~~l~~~aF   91 (159)
                      +...+++.+.+.+    ....+.+...++|++||.+.+.......   ..+.|   .+. ..+++|+|+..++.+.++|.
T Consensus        46 ~~~~~~~~~~~~~----~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~~~i~~l~V~p~~RgkGiG~~Ll~~~~~~a~  121 (158)
T 1vkc_A           46 ERHEELFESLLSQ----GEHKFFVALNERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAK  121 (158)
T ss_dssp             HHHHHHHHHHHHS----SEEEEEEEEETTCCEEEEEEEEEEECTTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHC----CCCEEEEEEECCCEEEEEEEEEEECCCCCCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHH
T ss_conf             9999999999849----994799999739979999999970477788658999999998889199969999999999999


Q ss_pred             CCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEE
Q ss_conf             486507999998264215899998749589667
Q gi|254781133|r   92 NQLCCQAVIHRIPDEDYPQHRMLTSLGGIRYRI  124 (159)
Q Consensus        92 ~~l~l~Ri~~~~~~~N~~S~rv~eklGF~~egv  124 (159)
                      + .|+.+|.+.|..+| +++++++|+||+.+|+
T Consensus       122 ~-~G~~~i~L~v~~~N-~A~~~Y~k~GF~~~~~  152 (158)
T 1vkc_A          122 E-RGAKKIVLRVEIDN-PAVKWYEERGYKARAL  152 (158)
T ss_dssp             H-TTCSCEEECCCTTC-THHHHHHHTTCCCCCC
T ss_pred             H-CCCCEEEEEECCCC-HHHHHHHHCCCEEEEE
T ss_conf             8-69988999988997-8999999889989989