HHsearch results for GI: 254781133 and protein with PDBid: 1vkc_A
>1vkc_A Putative acetyl transferase; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1
Probab=98.78 E-value=5.1e-08 Score=64.66 Aligned_cols=100 Identities=5% Similarity=0.033 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCC---CCCCE---EEE-CCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999999720011487854999982576076799999983467---83113---686-37766035999999999862
Q gi|254781133|r 19 QIIADFVAKRIKDCSSGWDRFVSMGILKSNFLVAGIIYHNYCPIS---RVIEL---SGA-SDCKSWLSRSVLKEIYSYPW 91 (159)
Q Consensus 19 e~~~~wi~~~~~~~~~~~~~~~ai~i~~~g~lvG~v~l~~~~~~~---~~~ei---g~~-~~~~~~~~~ea~~~l~~~aF 91 (159)
+...+++.+.+.+ ....+.+...++|++||.+.+....... ..+.| .+. ..+++|+|+..++.+.++|.
T Consensus 46 ~~~~~~~~~~~~~----~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~~~i~~l~V~p~~RgkGiG~~Ll~~~~~~a~ 121 (158)
T 1vkc_A 46 ERHEELFESLLSQ----GEHKFFVALNERSELLGHVWICITLDTVDYVKIAYIYDIEVVKWARGLGIGSALLRKAEEWAK 121 (158)
T ss_dssp HHHHHHHHHHHHS----SEEEEEEEEETTCCEEEEEEEEEEECTTTCSEEEEEEEEEECGGGTTSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC----CCCEEEEEEECCCEEEEEEEEEEECCCCCCCCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHH
T ss_conf 9999999999849----994799999739979999999970477788658999999998889199969999999999999
Q ss_pred CCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEE
Q ss_conf 486507999998264215899998749589667
Q gi|254781133|r 92 NQLCCQAVIHRIPDEDYPQHRMLTSLGGIRYRI 124 (159)
Q Consensus 92 ~~l~l~Ri~~~~~~~N~~S~rv~eklGF~~egv 124 (159)
+ .|+.+|.+.|..+| +++++++|+||+.+|+
T Consensus 122 ~-~G~~~i~L~v~~~N-~A~~~Y~k~GF~~~~~ 152 (158)
T 1vkc_A 122 E-RGAKKIVLRVEIDN-PAVKWYEERGYKARAL 152 (158)
T ss_dssp H-TTCSCEEECCCTTC-THHHHHHHTTCCCCCC
T ss_pred H-CCCCEEEEEECCCC-HHHHHHHHCCCEEEEE
T ss_conf 8-69988999988997-8999999889989989