HHsearch results for GI: 254781133 and protein with PDBid: 1y7r_A
>1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics, MCSG; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1
Probab=98.35 E-value=1.4e-06 Score=56.32 Aligned_cols=79 Identities=13% Similarity=0.158 Sum_probs=58.1
Q ss_pred EEEEECCCCEEEEEEEEEEEECCCCCCCE---EEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHH
Q ss_conf 99998257607679999998346783113---6863-7766035999999999862486507999998264215899998
Q gi|254781133|r 40 VSMGILKSNFLVAGIIYHNYCPISRVIEL---SGAS-DCKSWLSRSVLKEIYSYPWNQLCCQAVIHRIPDEDYPQHRMLT 115 (159)
Q Consensus 40 ~ai~i~~~g~lvG~v~l~~~~~~~~~~ei---g~~~-~~~~~~~~ea~~~l~~~aF~~l~l~Ri~~~~~~~N~~S~rv~e 115 (159)
+.+.+.++|++||.+.+... ....++| .+.. .+++|+|+..+..+++++-. .++.++.+.+. .|.+++++++
T Consensus 40 ~~~~~~~~~~~vG~~~~~~~--~~~~~~i~~~~v~p~~rg~GiG~~Ll~~~~~~a~~-~~~~~~~l~~~-~~~~a~~fY~ 115 (133)
T 1y7r_A 40 FTVTLYDKDRLIGMGRVIGD--GGTVFQIVDIAVLKSYQGQAYGSLIMEHIMKYIKN-VSVESVYVSLI-ADYPADKLYV 115 (133)
T ss_dssp EEEEEEETTEEEEEEEEEEC--SSSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHH-HCCTTCEEEEE-EETTHHHHHH
T ss_pred EEEEEEECCEEEEEEEEEEC--CCEEEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHH-CCCCEEEEEEC-CCHHHHHHHH
T ss_conf 99999999999999999975--98289999899937883689999999999999998-59976999985-7868999999
Q ss_pred HCCCEEE
Q ss_conf 7495896
Q gi|254781133|r 116 SLGGIRY 122 (159)
Q Consensus 116 klGF~~e 122 (159)
|+||++.
T Consensus 116 k~GF~~~ 122 (133)
T 1y7r_A 116 KFGFMPT 122 (133)
T ss_dssp TTTCEEC
T ss_pred HCCCEEC
T ss_conf 8889991