HHsearch results for GI: 254781133 and protein with PDBid: 1yk3_A
>1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related fold, structural genomics, PSI, protein structure initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis} SCOP: d.108.1.1
Probab=99.60 E-value=2.9e-14 Score=100.57 Aligned_cols=121 Identities=8% Similarity=-0.022 Sum_probs=90.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEEEC---------CCCCCCEEEEC----CCCCCHHH
Q ss_conf 799989999999997200114878549999825760767999999834---------67831136863----77660359
Q gi|254781133|r 14 KPRINQIIADFVAKRIKDCSSGWDRFVSMGILKSNFLVAGIIYHNYCP---------ISRVIELSGAS----DCKSWLSR 80 (159)
Q Consensus 14 ~P~t~e~~~~wi~~~~~~~~~~~~~~~ai~i~~~g~lvG~v~l~~~~~---------~~~~~eig~~~----~~~~~~~~ 80 (159)
.+.+.+...+|+.+.+.+. ....+.+..+|++||.+.+..... .....++++.+ .+.+|+++
T Consensus 71 ~~~~~e~~~~~~~~~~~~~-----~~~~~i~~~dg~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~G~G~g~ 145 (210)
T 1yk3_A 71 YDWPASRWRQHLNAQLEGT-----YSLPLIGSWHGTDGGYLELYWAAKDLISHYYDADPYDLGLHAAIADLSKVNRGFGP 145 (210)
T ss_dssp CCCCHHHHHHHHHHHHTSS-----SEEEEEEEETTEEEEEEEEEEGGGBGGGGSSCCCTTCEEEEEEESCHHHHTTTHHH
T ss_pred CCCCHHHHHHHHHHHHCCC-----CEEEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECHHHCCCCHHH
T ss_conf 9999999999999742347-----45899999999998744676154442222336888845999999665651675799
Q ss_pred HHHHHHHHHHH-CCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCEEEEEEEEECH
Q ss_conf 99999999862-48650799999826421589999874958966761289410079998628
Q gi|254781133|r 81 SVLKEIYSYPW-NQLCCQAVIHRIPDEDYPQHRMLTSLGGIRYRIPRLRGRNAAENIYVITH 141 (159)
Q Consensus 81 ea~~~l~~~aF-~~l~l~Ri~~~~~~~N~~S~rv~eklGF~~egv~R~~G~~~d~~v~~l~~ 141 (159)
++++++++|+| ++++++||.+.+.++|.+|++++||+||+.+|....-++ ...+|.|.+
T Consensus 146 ~al~~ll~~~f~~~~~~~ri~~~v~~~N~~s~rl~ek~GF~~~ge~~~p~k--~~~l~~l~r 205 (210)
T 1yk3_A 146 LLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGEHDTTNR--RMALYALEA 205 (210)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEEEEECSSC--EEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEEECCCC--CEEEEEECC
T ss_conf 999999999997388920999998747899999999769989889817998--489999708