HHsearch results for GI: 254781133 and protein with PDBid: 2cnt_A
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal protein, acetyltransferase; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A*
Probab=99.26 E-value=1.4e-10 Score=79.46 Aligned_cols=97 Identities=12% Similarity=0.040 Sum_probs=76.0
Q ss_pred EEEEEECCCCEEEEEEEEEEEECCCCCCCE---EEE-CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHH
Q ss_conf 499998257607679999998346783113---686-3776603599999999986248650799999826421589999
Q gi|254781133|r 39 FVSMGILKSNFLVAGIIYHNYCPISRVIEL---SGA-SDCKSWLSRSVLKEIYSYPWNQLCCQAVIHRIPDEDYPQHRML 114 (159)
Q Consensus 39 ~~ai~i~~~g~lvG~v~l~~~~~~~~~~ei---g~~-~~~~~~~~~ea~~~l~~~aF~~l~l~Ri~~~~~~~N~~S~rv~ 114 (159)
...+.+..+|++||.+.+....+ .++| ++. -.++.|+++..+..+++++.+ .++++|.+.+.+.|.+|++++
T Consensus 40 ~~~~v~~~~~~ivG~~~~~~~~~---~~~I~~l~V~p~~rg~Gig~~Ll~~~~~~~~~-~~~~~i~l~v~~~N~~a~~fY 115 (160)
T 2cnt_A 40 YLNLKLTADDRMAAFAITQVVLD---EATLFNIAVDPDFQRRGLGRMLLEHLIDELET-RGVVTLWLEVRASNAAAIALY 115 (160)
T ss_dssp BCCEEEEETTEEEEEEEEEEETT---EEEEEEEEECGGGCSSSHHHHHHHHHHHHHHH-TTCCEEEEEEETTCHHHHHHH
T ss_pred CEEEEEEECCEEEEEEEEEECCC---EEEEEEEEEEHHHHHCCHHHHHHHHHHHHHHH-CCCCEEEEEECCCCHHHHHHH
T ss_conf 38999999998999999998099---69999999936874388568999999999996-398489999874849999999
Q ss_pred HHCCCEEEEEECCC----CCEEEEEEEEE
Q ss_conf 87495896676128----94100799986
Q gi|254781133|r 115 TSLGGIRYRIPRLR----GRNAAENIYVI 139 (159)
Q Consensus 115 eklGF~~egv~R~~----G~~~d~~v~~l 139 (159)
+|+||+++|+.+.+ +...|.++|.+
T Consensus 116 ~k~GF~~~g~~~~yy~~~~~~~D~~~m~~ 144 (160)
T 2cnt_A 116 ESLGFNEATIRRNYYPTAQGHEDAIIMAL 144 (160)
T ss_dssp HHHTCEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred HHCCCEEEEEEECCEECCCCCEEEEEEEE
T ss_conf 98899998499383748999889999994