HHsearch results for GI: 254781133 and protein with PDBid: 3eo4_A
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, structural genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=99.49 E-value=3e-13 Score=94.76 Aligned_cols=113 Identities=11% Similarity=0.040 Sum_probs=84.6
Q ss_pred ECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCEEEEC----CCCCCHHHHHHH
Q ss_conf 3689879998999999999720011487854999982576076799999983467831136863----776603599999
Q gi|254781133|r 9 WGGNAKPRINQIIADFVAKRIKDCSSGWDRFVSMGILKSNFLVAGIIYHNYCPISRVIELSGAS----DCKSWLSRSVLK 84 (159)
Q Consensus 9 W~~~~~P~t~e~~~~wi~~~~~~~~~~~~~~~ai~i~~~g~lvG~v~l~~~~~~~~~~eig~~~----~~~~~~~~ea~~ 84 (159)
+.....|.+.+....|....... ....+.+....++.+||.+.+..++. ..+++++.+ .++.|+++++++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~iG~~~~~~~~~--~~~~~~~~i~~~~~~gkG~g~~~~~ 113 (164)
T 3eo4_A 40 FYIQKEPLKWEEHYSWWMSRENR----VDWIILLRENNTIRKVGSVNVSQLNT--DNPEIGILIGEFFLWGKHIGRHSVS 113 (164)
T ss_dssp STTCCSCCCHHHHHHHHHHCCSC----EEEEEEEEETTEEEEEEEEEEECTTS--SSCEEEEEECSTTSTTSSHHHHHHH
T ss_pred HCCCCCCCCHHHHHHHHHHCCCC----CCEEEEEEECCCCEEEEEEEEECCCC--CCEEEEEEEEEECCCCCCCHHHHHH
T ss_conf 26899998899999999860448----86899999788845999998522678--7269989996501024671369999
Q ss_pred HHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEECCC
Q ss_conf 99998624865079999982642158999987495896676128
Q gi|254781133|r 85 EIYSYPWNQLCCQAVIHRIPDEDYPQHRMLTSLGGIRYRIPRLR 128 (159)
Q Consensus 85 ~l~~~aF~~l~l~Ri~~~~~~~N~~S~rv~eklGF~~egv~R~~ 128 (159)
++++| |.++++++|.+.|.++|.+|+++++|+||+.+|..|.+
T Consensus 114 ~~~~~-~~~~g~~~v~~~v~~~N~~s~~~~~k~GF~~~g~~~~~ 156 (164)
T 3eo4_A 114 LVLKW-LKNIGYKKAHARILENNIRSIKLFESLGFKKTKKGREN 156 (164)
T ss_dssp HHHHH-HHHTTCCEEEEEEETTCHHHHHHHHHTTCEEEEECSTT
T ss_pred HHHHH-HHHCCEEEEEEEECCCCHHHHHHHHHCCCEEEEEECCE
T ss_conf 99998-66344347999876788999999998899999897260