HHsearch results for GI: 254781133 and protein with PDBid: 3i9s_A
>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae}
Probab=98.79 E-value=1.5e-07 Score=62.01 Aligned_cols=104 Identities=11% Similarity=0.119 Sum_probs=71.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCC---CCCC---EEEE-CCCCCCHHHHHHHHHH
Q ss_conf 9998999999999720011487854999982576076799999983467---8311---3686-3776603599999999
Q gi|254781133|r 15 PRINQIIADFVAKRIKDCSSGWDRFVSMGILKSNFLVAGIIYHNYCPIS---RVIE---LSGA-SDCKSWLSRSVLKEIY 87 (159)
Q Consensus 15 P~t~e~~~~wi~~~~~~~~~~~~~~~ai~i~~~g~lvG~v~l~~~~~~~---~~~e---ig~~-~~~~~~~~~ea~~~l~ 87 (159)
+.+.+.+..++....-+. .+....+....++++||.+.+....... ..+. +.+. -.++.|+|+..+..+.
T Consensus 53 ~~~~~~~~~~l~~~~~~~---~~~~~~~va~~~~~iVG~~~~~~~~~~~~~~~~~~i~~l~V~p~~Rg~GiG~~Ll~~~~ 129 (183)
T 3i9s_A 53 AASEQDLANYLSHQVFSE---HSGVKVIAAVEHDKVLGFATYTIMFPAPKLSGQMYMKDLFVSSSARGKGIGLQLMKHLA 129 (183)
T ss_dssp CCCHHHHHHHHHHTTTST---TCCCEEEEEEETTEEEEEEEEEEESCCGGGCEEEEEEEEEECGGGTTSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCC---CCCEEEEEEEECCEEEEEEEEEEECCCCCCCCEEEEEEEEECHHCCCCCHHHHHHHHHH
T ss_conf 238899999999974377---98609999998999999999997158656798799980197300379879999999999
Q ss_pred HHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEE
Q ss_conf 98624865079999982642158999987495896
Q gi|254781133|r 88 SYPWNQLCCQAVIHRIPDEDYPQHRMLTSLGGIRY 122 (159)
Q Consensus 88 ~~aF~~l~l~Ri~~~~~~~N~~S~rv~eklGF~~e 122 (159)
++|- +.|+.+|.+.|.+.|.+++++++|+||+..
T Consensus 130 ~~a~-~~g~~~i~L~v~~~N~~A~~fYek~Gf~~~ 163 (183)
T 3i9s_A 130 TIAI-THNCQRLDWTAESTNPTAGKFYKSIGASLI 163 (183)
T ss_dssp HHHH-HTTEEEEEEEEETTCHHHHHHHHHTTCEEC
T ss_pred HHHH-HCCCCEEEEEEECCCHHHHHHHHHCCCEEE
T ss_conf 9999-869999999992889999999998799891