HHSEARCH alignment of GI: 254781133 and SCOP domain: d2fcka1

Alignment
>d2fcka1 d.108.1.1 (A:1-178) Putative ribosomal-protein-serine acetyltransferase VC1889 {Vibrio cholerae [TaxId: 666]}
Probab=99.92  E-value=3.1e-24  Score=156.58  Aligned_cols=134  Identities=10%  Similarity=0.071  Sum_probs=117.8

Q ss_pred             EECC-CCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEEECCCCCCCEEEECC---CCCCHHHHHH
Q ss_conf             7368-98799989999999997200114878549999825760767999999834678311368637---7660359999
Q gi|254781133|r    8 TWGG-NAKPRINQIIADFVAKRIKDCSSGWDRFVSMGILKSNFLVAGIIYHNYCPISRVIELSGASD---CKSWLSRSVL   83 (159)
Q Consensus         8 ~W~~-~~~P~t~e~~~~wi~~~~~~~~~~~~~~~ai~i~~~g~lvG~v~l~~~~~~~~~~eig~~~~---~~~~~~~ea~   83 (159)
                      .|.. .+.|.+.+....|++....++..+....++|..++++++||.++++++++..+.+|||+++.   ++.|++++++
T Consensus        37 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~~iG~~~l~~~~~~~~~~eig~~i~~~~~g~G~~~e~l  116 (178)
T d2fcka1          37 QWVDWCHALFSQQEAEQFIQATRLNWVKAEAYGFGVFERQTQTLVGMVAINEFYHTFNMASLGYWIGDRYQRQGYGKEAL  116 (178)
T ss_dssp             GTSCC----CCHHHHHHHHHHHHHHHHTTSCEEEEEEETTTCCEEEEEEEEEEEGGGTEEEEEEEECHHHHTTTHHHHHH
T ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCHHHHHHH
T ss_conf             53047999989999999999999998728962787651017926999750245667775888776411223310234442


Q ss_pred             HHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHCCCEEEEEECC----CCCEEEEEEEEECH
Q ss_conf             99999862486507999998264215899998749589667612----89410079998628
Q gi|254781133|r   84 KEIYSYPWNQLCCQAVIHRIPDEDYPQHRMLTSLGGIRYRIPRL----RGRNAAENIYVITH  141 (159)
Q Consensus        84 ~~l~~~aF~~l~l~Ri~~~~~~~N~~S~rv~eklGF~~egv~R~----~G~~~d~~v~~l~~  141 (159)
                      .++++|+|+++++++|.+.|.++|.+|+++++|+||+.||+.|+    .|++.|.++|+||.
T Consensus       117 ~~l~~~af~~~~~~~i~~~~~~~N~~s~~l~ek~GF~~eg~~~~~~~~~G~~~D~~~y~ll~  178 (178)
T d2fcka1         117 TALILFCFERLELTRLEIVCDPENVPSQALALRCGANREQLAPNRFLYAGEPKAGIVFSLIP  178 (178)
T ss_dssp             HHHHHHHHHTSCCSEEEEEECTTCHHHHHHHHHTTCEEEEEEEEEEEETTEEEEEEEEEECC
T ss_pred             HEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEEEEEEECCEEEEEEEEEECC
T ss_conf             05533401446740356763778399999999889999999823799999999999999479


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Putative ribosomal-protein-serine acetyltransferase VC1889
species: Vibrio cholerae [TaxId: 666]