BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781134|ref|YP_003065547.1| hypothetical protein
CLIBASIA_05180 [Candidatus Liberibacter asiaticus str. psy62]
         (320 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254781134|ref|YP_003065547.1| hypothetical protein CLIBASIA_05180 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040811|gb|ACT57607.1| hypothetical protein CLIBASIA_05180 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 320

 Score =  265 bits (677), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 320/320 (100%), Positives = 320/320 (100%)

Query: 1   MQAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPL 60
           MQAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPL
Sbjct: 1   MQAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPL 60

Query: 61  GKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMIL 120
           GKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMIL
Sbjct: 61  GKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMIL 120

Query: 121 WEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTFW 180
           WEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTFW
Sbjct: 121 WEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTFW 180

Query: 181 QGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHS 240
           QGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHS
Sbjct: 181 QGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHS 240

Query: 241 YPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVI 300
           YPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVI
Sbjct: 241 YPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVI 300

Query: 301 VSSGKSINDIQINNAKLLVE 320
           VSSGKSINDIQINNAKLLVE
Sbjct: 301 VSSGKSINDIQINNAKLLVE 320


>gi|227822437|ref|YP_002826409.1| hypothetical protein NGR_c18920 [Sinorhizobium fredii NGR234]
 gi|227341438|gb|ACP25656.1| hypothetical protein NGR_c18920 [Sinorhizobium fredii NGR234]
          Length = 536

 Score =  258 bits (658), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 135/321 (42%), Positives = 194/321 (60%), Gaps = 9/321 (2%)

Query: 1   MQAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPL 60
           M+ GGSL  GFSWS ESGDGLS LCVF+ST GE+AVY G +P  +S F+LK +Y IG+PL
Sbjct: 216 MKKGGSLITGFSWSLESGDGLSDLCVFVSTEGEIAVYAGSDPSSASDFALKGVYQIGKPL 275

Query: 61  GKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNL--PLSWPIQEQWEQAIMVAPTGWSM 118
           GK A + V  DV IAT++GL  M  +  ++ +      +S PI++ W QA     +GW++
Sbjct: 276 GKNAWIRVGGDVLIATSDGLTPMSQVFQRDRQALSQVSISRPIEDDWRQAANATGSGWTI 335

Query: 119 ILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGT 178
             W ++N++ ++ P NS++SDKTFV+NV  + RW++  NW    +      LFFG  +G 
Sbjct: 336 KPWAEQNLVFVAFPDNSVVSDKTFVLNVL-SGRWATISNWRASCFETLQGGLFFGSRDGY 394

Query: 179 FWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYD 238
            WQGD  G+D+   F   YLS F     + G +  A +AH+ L+A  RP ++LFARA++D
Sbjct: 395 CWQGDTGGTDDGLTFAASYLSQFTPAG-QFGQRTAATMAHMYLRAKTRPKVQLFARADFD 453

Query: 239 HSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGC 298
            + P F    ++   + +  WD  LWD  +W     V++   + F QNV A G+ LAVGC
Sbjct: 454 RTTPPFD--RVTEGDIASPEWDVGLWDVARWDG---VSQALRYDFRQNVRASGDMLAVGC 508

Query: 299 VIVSSGKSINDIQINNAKLLV 319
           VI S G    DI+++ A L V
Sbjct: 509 VITSGGAVKLDIEVDLATLQV 529


>gi|117925017|ref|YP_865634.1| hypothetical protein Mmc1_1720 [Magnetococcus sp. MC-1]
 gi|117608773|gb|ABK44228.1| hypothetical protein Mmc1_1720 [Magnetococcus sp. MC-1]
          Length = 508

 Score =  251 bits (641), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 13/314 (4%)

Query: 3   AGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGK 62
            GG L A  +W+ + GDGL    VFL + G+V +Y G NP+D++S+SL  IY +G P+G+
Sbjct: 198 NGGYLQAMGTWTRDGGDGLDDFAVFLMSEGDVLIYQGSNPNDATSWSLVGIYRLGAPIGR 257

Query: 63  RAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPT--GWSMIL 120
           R ++   +D+ + T +G + +  +L    ++   LS  IQ     AI  + +  GW  + 
Sbjct: 258 RCVMRYGSDLIVITQDGYLPLSKVL-SGSRSGEALSDRIQGALSVAIRNSASRFGWQALH 316

Query: 121 WEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTFW 180
           +   N LL + P+ S   +   + N      W  F       + V  + L+FG   G  +
Sbjct: 317 YPAGNYLLFNVPQASGRYE-QHIFN-MTTGAWCRFTGQNGICWAVFEDRLYFGAQNGVLY 374

Query: 181 QGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHS 240
           + D    D+ +  +    + F  +  R    +R  +    L +     + L    ++  +
Sbjct: 375 RADYGTHDDGQDIVTDGRTSFQYLGGRSST-KRFTMMRPLLSSDANLPVSLTLDTDFGEN 433

Query: 241 YPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVI 300
               +    S N  +   WD+  WD   W   + +         Q+ +  G C++V    
Sbjct: 434 --PPAPAISSPNQAEGAAWDSEQWDTATWGGAMQIRG-----QWQSCLGIGYCVSVRLRT 486

Query: 301 VSSGKSINDIQINN 314
            ++ +++    ++ 
Sbjct: 487 ATANQNVRWHALDV 500


>gi|150397022|ref|YP_001327489.1| hypothetical protein Smed_1819 [Sinorhizobium medicae WSM419]
 gi|150028537|gb|ABR60654.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
          Length = 538

 Score =  248 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 130/321 (40%), Positives = 186/321 (57%), Gaps = 9/321 (2%)

Query: 1   MQAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPL 60
           M+ GGSL  GFSWS ESGDGLS LCVFLST GE+AVY G +P  +S F+LK +Y IGRPL
Sbjct: 218 MKKGGSLLTGFSWSLESGDGLSDLCVFLSTEGEIAVYAGSDPSSASDFALKGVYQIGRPL 277

Query: 61  GKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNL--PLSWPIQEQWEQAIMVAPTGWSM 118
           GK   +    D+ IAT +GL  M  +  ++ +      +S PI++ W +A     TGW++
Sbjct: 278 GKNGWIRAGADILIATTDGLTPMSQVFQRDRQALSLVSVSRPIEDDWRRAANATGTGWTL 337

Query: 119 ILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGT 178
             W ++N++ ++ P+N++++D TFV+NV    RWS+  NW    Y      LFFG  +G 
Sbjct: 338 KQWPEQNLVFVAFPENTVVADTTFVLNVL-TGRWSTISNWQALCYETLQGGLFFGSLDGY 396

Query: 179 FWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYD 238
            WQGD  G+D+   F   YLS F     + G +  A +AH+  +A   P ++LFARA+YD
Sbjct: 397 MWQGDAGGTDDGLSFSATYLSQFSP-ATQFGQRATATMAHMYFRAKSAPKVRLFARADYD 455

Query: 239 HSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGC 298
            S P F+    +     +  WD  LWD   W     V++ + + F QNV A G+ + VGC
Sbjct: 456 RSTPTFTT--STEGEASSSEWDVGLWDRAIWDG---VSEVQRYDFRQNVRATGDMIGVGC 510

Query: 299 VIVSSGKSINDIQINNAKLLV 319
           VI S G    DI+++ A + V
Sbjct: 511 VITSGGDFKLDIEVDLATVQV 531


>gi|316933870|ref|YP_004108852.1| hypothetical protein Rpdx1_2528 [Rhodopseudomonas palustris DX-1]
 gi|315601584|gb|ADU44119.1| hypothetical protein Rpdx1_2528 [Rhodopseudomonas palustris DX-1]
          Length = 558

 Score =  243 bits (620), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 85/323 (26%), Positives = 153/323 (47%), Gaps = 13/323 (4%)

Query: 2   QAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLG 61
           + GGSL  G SWS E+ D LS  CVF++T GEVAVY G +P  +S+++    Y IGRPLG
Sbjct: 239 KRGGSLLFGASWSLET-DNLSEQCVFVTTEGEVAVYQGTDPSSASTWAKVGTYRIGRPLG 297

Query: 62  KRAIVFVKNDVWIATNNGLISMKNILLQEEKTNL--PLSWPIQEQWEQAI--MVAPTGWS 117
            +AI+    D+ I T+ G + +   + ++        +S+PI+  W + +    A   W 
Sbjct: 298 PKAIIPAGGDLVIGTDMGFVPLSQAVQRDISALSPAAISYPIETAWNETVEATAASGAWH 357

Query: 118 MILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEG 177
             +W  ++M +++ P   +   + FV N A    W  +  W  +   +  +  FFG  +G
Sbjct: 358 CEVWPTKHMAIVAPPTPVVGFPQVFVAN-ARTGAWGRYTGWKARCLGLFRDRAFFGSDQG 416

Query: 178 TFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANY 237
              + ++SG+D  RP+  +++  F          + A +   ++QA      +L  +A+Y
Sbjct: 417 LVIEAEVSGADRGRPYTAVWVPLFETFKAPASL-KTAGLMRATVQAASEVVPRLSLQADY 475

Query: 238 DHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVG 297
           + + P    +      + +  W  ++W    W      + +K+FQ  Q+V   G  +A G
Sbjct: 476 NVNLPTPPDDA---GAVASNTWGAAIWGVSLW---SEPSGRKVFQRWQSVGGRGYAIAPG 529

Query: 298 CVIVSSGKSINDIQINNAKLLVE 320
             I S   S  D+ +   ++  +
Sbjct: 530 LQITSGKASPPDVDVIKVEITYD 552


>gi|315122528|ref|YP_004063017.1| hypothetical protein CKC_03900 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495930|gb|ADR52529.1| hypothetical protein CKC_03900 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 532

 Score =  237 bits (604), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 249/320 (77%), Positives = 280/320 (87%)

Query: 1   MQAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPL 60
           MQAGGSL AGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPD   SF+LKAIYHIGRPL
Sbjct: 213 MQAGGSLFAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDSIDSFALKAIYHIGRPL 272

Query: 61  GKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMIL 120
           GK+AI+FVKNDVWIAT NGLISMKNILLQ E  NLPLS  IQE+W QAIM  PTGWS+ L
Sbjct: 273 GKKAIIFVKNDVWIATTNGLISMKNILLQGEGANLPLSSAIQEEWNQAIMEVPTGWSLTL 332

Query: 121 WEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTFW 180
           WEKRNMLL+SCP++SLLS KT VMNV +NN W+S HNWFTQSYV+AN+NLFFGDYEG+FW
Sbjct: 333 WEKRNMLLVSCPQHSLLSSKTLVMNVDNNNYWASLHNWFTQSYVIANDNLFFGDYEGSFW 392

Query: 181 QGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHS 240
           QGDISGSD+ RPF  IYLSPF      LG +R+AC AH+SLQAYQRPYLKLF+R++YD S
Sbjct: 393 QGDISGSDDNRPFQAIYLSPFRESYSYLGVKRKACQAHISLQAYQRPYLKLFSRSDYDKS 452

Query: 241 YPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVI 300
           YP+F KET++ NP+++G+WDNS+WDE +WTDN F+ KKKLF F QNVVAYGN LAVGCVI
Sbjct: 453 YPDFFKETVNANPINSGLWDNSIWDESQWTDNFFIRKKKLFNFSQNVVAYGNFLAVGCVI 512

Query: 301 VSSGKSINDIQINNAKLLVE 320
           VSSGK INDIQINN+KLLVE
Sbjct: 513 VSSGKFINDIQINNSKLLVE 532


>gi|13470677|ref|NP_102246.1| hypothetical protein mll0452 [Mesorhizobium loti MAFF303099]
 gi|14021419|dbj|BAB48032.1| mll0452 [Mesorhizobium loti MAFF303099]
          Length = 528

 Score =  225 bits (574), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 76/322 (23%), Positives = 138/322 (42%), Gaps = 10/322 (3%)

Query: 2   QAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLG 61
           Q GGS+  G +WS E+G G+   CV +S  GEVAV+ G NP D++++SL   Y +   LG
Sbjct: 208 QDGGSVLCGGTWSLETGGGIDAKCVIISDRGEVAVFQGTNPADATAWSLVGRYAMSPLLG 267

Query: 62  KRAIVFVKNDVWIATNNGLISMKNILLQEEKTNL--PLSWPIQEQWEQAIMVAPTG-WSM 118
            RA++    D+ +   +G++ +   + ++        ++  I+  W + +       W +
Sbjct: 268 PRALMQAGGDLLMGMADGIVPISQAIQKDAAALALISVTRAIEPDWRKEVAARTVLPWEL 327

Query: 119 ILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGT 178
           + W + NM +++ P +     K FV+N      W+ +  W     V+     +FG  +G 
Sbjct: 328 LKWPQFNMGIVALPASPGQDRKVFVVN-LQTGAWADYTGWDACCLVLHAGWAYFGTSDGK 386

Query: 179 FWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYD 238
             Q ++ G D+  P++  Y+  F  +       +   +A     A ++   KL    NY 
Sbjct: 387 IMQCEVGGIDDGMPYVCTYVGLFDHMKAVART-KIIHMARTVFIASRKFVPKLSVSTNYQ 445

Query: 239 HSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGC 298
            S P        +  +D   WD+ LWD+  W        K +     +V   G  +A   
Sbjct: 446 VSLPSPPPSAPDDVTLD--TWDSGLWDKAVWDAGWV---KAVTTKWTSVGQSGFIIAPQV 500

Query: 299 VIVSSGKSINDIQINNAKLLVE 320
            + S      D ++    +  E
Sbjct: 501 QVTSGVTPTPDAELVEIDMTYE 522


>gi|152982947|ref|YP_001353888.1| hypothetical protein mma_2198 [Janthinobacterium sp. Marseille]
 gi|151283024|gb|ABR91434.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 519

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 71/318 (22%), Positives = 127/318 (39%), Gaps = 16/318 (5%)

Query: 3   AGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGK 62
            GG L +  +WS ++G G+    VF+++ G+VAVY G +P  +++++L  IY IG P+G+
Sbjct: 208 KGGYLMSMGNWSLDAGYGMDDYAVFVTSEGQVAVYKGTDPASATTWALIGIYDIGSPIGR 267

Query: 63  RAIVFVKNDVWIATNNGLISMKNILLQEEKTNLP-LSWPIQEQWEQAI--MVAPTGWSMI 119
           R ++    D+ +   +GL  +   L+     ++  L+  IQ           A  GW   
Sbjct: 268 RCLMKYAGDLTLICKDGLAPLSKSLMSSRVNSMEMLTDKIQHVVSDYTTLYAANFGWETA 327

Query: 120 LWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTF 179
           L+ + NMLL++ P +        VMN   +  WS F  W    + +  + LFFG   G  
Sbjct: 328 LFPQENMLLVNVPTSPTT-SYQLVMNTI-SGAWSRFIGWNASCFELHGDELFFGSSGGVC 385

Query: 180 WQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDH 239
              D   +DN           F+    R    ++  +    +       + L    ++D 
Sbjct: 386 KAWDTQ-ADNGTNIDFEAQQSFNYFGARSQL-KQVKMLRPLISTDGSSSVLLGVNTDFD- 442

Query: 240 SYPEFSKETISNNPMDNGIWDNSLWDE-VKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGC 298
                     + +P     WD S+WD    W+ +L + K       Q     G C++   
Sbjct: 443 --TTAPTGIPTFSPTAGAAWDISVWDGMDTWSGDLAIKK-----DWQTAFGLGYCISAHI 495

Query: 299 VIVSSGKSINDIQINNAK 316
              +    +     +   
Sbjct: 496 KGAAKNSKLRWAATDYLV 513


>gi|110632595|ref|YP_672803.1| hypothetical protein Meso_0234 [Mesorhizobium sp. BNC1]
 gi|110283579|gb|ABG61638.1| hypothetical protein Meso_0234 [Chelativorans sp. BNC1]
          Length = 632

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 91/322 (28%), Positives = 137/322 (42%), Gaps = 14/322 (4%)

Query: 3   AGGSLPAGFSWSTESGD--GLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPL 60
            GG+L  G SWS  S    GLS  C F+ST GEV VY G +PD S  +S   IY IG+PL
Sbjct: 315 QGGALLVGQSWSMSSSGQGGLSDQCTFVSTEGEVVVYQGSHPDVSGDWSKVGIYRIGKPL 374

Query: 61  GKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNL--PLSWPIQEQWEQAIMVAPTGWSM 118
           G+RA +    D+  AT  G +++   +  +        +S+ I++ W + +      W  
Sbjct: 375 GRRAFIRAGGDLVFATTIGFVALSTAIQVDVAALSPKAVSFAIEDVWNETVNTRSGDWVC 434

Query: 119 ILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGT 178
            LW    M+ I+ P      D  F ++ A    W+ F NW      V    L+FG  E  
Sbjct: 435 CLWPAGQMVAIAPP--VGDDDMLFWVSNARTGAWAPFTNWAASCMEVFEGRLYFGMGE-F 491

Query: 179 FWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYD 238
             Q  + G+D + PF G Y+  F          + A +A   + +      KL  R ++D
Sbjct: 492 VMQAMVGGTDASEPFAGTYMPLFSDNGKPS-AHKYAKMARAEIISATVLEEKLSCRFDFD 550

Query: 239 HSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGC 298
            + P                WDN++WDE  W+       + + +   +V   G  ++   
Sbjct: 551 TNLP---PAPNVAPVPVGNEWDNAIWDESLWSS---PRDQIVSKRRHSVSGDGYRISPVL 604

Query: 299 VIVSSGKSINDIQINNAKLLVE 320
            I S      D QI +  LL E
Sbjct: 605 QISSGAAVPLDAQIVSLDLLYE 626


>gi|126444876|ref|YP_001063338.1| hypothetical protein BURPS668_A2344 [Burkholderia pseudomallei 668]
 gi|126224367|gb|ABN87872.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
          Length = 590

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 72/313 (23%), Positives = 115/313 (36%), Gaps = 14/313 (4%)

Query: 4   GGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKR 63
           GG L    +W+ ++  GL+   VF+++ GEV VY G +P  SSSF + A + IG P+G+R
Sbjct: 278 GGFLMGMATWNIDNSAGLNPYAVFVTSRGEVIVYQGSDPSQSSSFGISARFRIGPPVGRR 337

Query: 64  AIVFVKNDVWIATNNGLISMKN---ILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMIL 120
                 +D+     +GL  +        Q+ K  L        Q +        GW   L
Sbjct: 338 FYEKYGSDIVFIGADGLTPLSQALLTDRQQRKITLTEKISPTVQADYFAYQGNFGWQCTL 397

Query: 121 WEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTFW 180
           + + N L+++ P         +VMN      W  F  W    +   N NL+FG       
Sbjct: 398 FPEGNKLVVNVPDQEDQLSHQYVMNTI-TGAWCKFTGWNAFCFTYFNGNLYFGGA-AFVA 455

Query: 181 QGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHS 240
           Q D++ SD            F+    R G ++   +             +L    ++  S
Sbjct: 456 QADVTNSDAGMAISSDIEPAFNYFGMR-GQEKLFKMMRPVFITNAPLAPQLDIALDF-SS 513

Query: 241 YPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVI 300
            P  S  T S    +   WD + WDEV W D   V         +++   G         
Sbjct: 514 APPTSTPTFSQAHFN--RWDITPWDEVPWNDGHIVQT-----DWESIDGLGYAATFRMRC 566

Query: 301 VSSGKSINDIQIN 313
            +          +
Sbjct: 567 QTIDVEFALESFD 579


>gi|167907341|ref|ZP_02494546.1| hypothetical protein BpseN_34245 [Burkholderia pseudomallei NCTC
           13177]
          Length = 590

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 72/313 (23%), Positives = 115/313 (36%), Gaps = 14/313 (4%)

Query: 4   GGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKR 63
           GG L    +W+ ++  GL+   VF+++ GEV VY G +P  SSSF + A + IG P+G+R
Sbjct: 278 GGFLMGMATWNIDNSAGLNPYAVFVTSRGEVIVYQGSDPSQSSSFGISARFRIGPPVGRR 337

Query: 64  AIVFVKNDVWIATNNGLISMKN---ILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMIL 120
                 +D+     +GL  +        Q+ K  L        Q +        GW   L
Sbjct: 338 FYEKYGSDIVFIGADGLTPLSQALLTDRQQRKITLTEKISPTVQADYFAYQGNFGWQCTL 397

Query: 121 WEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTFW 180
           + + N L+++ P         +VMN      W  F  W    +   N NL+FG       
Sbjct: 398 FPEGNKLVVNVPDQEDQLSHQYVMNTI-TGAWCKFTGWNAFCFTYFNGNLYFGGA-AFVA 455

Query: 181 QGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHS 240
           Q D++ SD            F+    R G ++   +             +L    ++  S
Sbjct: 456 QADVTNSDAGMAISSDIEPAFNYFGMR-GQEKLFKMMRPVFITNAPLAPQLDIALDF-SS 513

Query: 241 YPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVI 300
            P  S  T S    +   WD + WDEV W D   V         +++   G         
Sbjct: 514 APPTSTPTFSQAHFN--RWDITPWDEVPWNDGHIVQT-----DWESIDGLGYAATFRMRC 566

Query: 301 VSSGKSINDIQIN 313
            +          +
Sbjct: 567 QTIDVEFALESFD 579


>gi|254720058|ref|ZP_05181869.1| hypothetical protein Bru83_11056 [Brucella sp. 83/13]
 gi|265985065|ref|ZP_06097800.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|264663657|gb|EEZ33918.1| conserved hypothetical protein [Brucella sp. 83/13]
          Length = 481

 Score =  203 bits (515), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 11/275 (4%)

Query: 3   AGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGK 62
            GG L  G +WST+SG G+  +CVF++ +GEVAV+ G NPD   ++S    Y IG+PLGK
Sbjct: 213 KGGVLLFGGTWSTDSGSGMDDMCVFVTDMGEVAVFQGTNPDTIDTWSKVGTYVIGKPLGK 272

Query: 63  RAIVFVKNDVWIATNNGLISMKNILLQEEKTN--LPLSWPIQEQWEQAIMVAPT---GWS 117
            A      D+ I T++G++S+  I+ ++        +++PI+  W   +         +S
Sbjct: 273 NAFFKTGGDIAIITDDGIVSISQIMQKDRAGLASAAITFPIETLWRDVVFSRAFAGYDFS 332

Query: 118 MILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEG 177
            I+W   ++LL+  P  +  +  + V N      W  +  W  +  VV ++ L+FG  +G
Sbjct: 333 AIVWPTESLLLVVVPSFAGGTKFSLVANT-KTGSWCRYTGWDARCAVVFDDKLYFGTSDG 391

Query: 178 TFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANY 237
              QG+  GS+   P+    L  F  +   +   + A  A   +++  +    +FA ++Y
Sbjct: 392 RVIQGETGGSECGEPYAATILPRFDNMGSPVS--KSALHARCVMRSNNKFEPIMFANSDY 449

Query: 238 DHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDN 272
               P             + +W  ++W E  W   
Sbjct: 450 KVDLPNAGISY---GDASSNVWGGAIWGESTWGAG 481


>gi|306839390|ref|ZP_07472204.1| Hypothetical protein BROD_2246 [Brucella sp. NF 2653]
 gi|306405513|gb|EFM61778.1| Hypothetical protein BROD_2246 [Brucella sp. NF 2653]
          Length = 481

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 11/275 (4%)

Query: 3   AGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGK 62
            GG L  G +WST+SG G+  +CVF++ +GEVAV+ G NPD   ++S    Y IG+PLGK
Sbjct: 213 KGGVLLFGGTWSTDSGSGMDDMCVFVTDMGEVAVFQGTNPDTIDTWSKVGTYVIGKPLGK 272

Query: 63  RAIVFVKNDVWIATNNGLISMKNILLQEEKTN--LPLSWPIQEQWEQAIMVAPT---GWS 117
            A      D+ I T++G++S+  I+ ++        +++PI+  W   +         +S
Sbjct: 273 NAFFKTGGDIAIITDDGIVSISQIMQKDRAGLASAAITFPIETLWRDVVFSRAFAGYDFS 332

Query: 118 MILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEG 177
            I+W   ++LL+  P  +  +  + V N      W  +  W  +  VV ++ L+FG  +G
Sbjct: 333 AIVWPTESLLLVVVPSFAGGTKFSLVANT-KTGSWCRYTGWDARCAVVFDDKLYFGTSDG 391

Query: 178 TFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANY 237
              QG+  GS+   P+    L  F  +   +   + A  A   +++  +    +FA ++Y
Sbjct: 392 RVIQGETGGSECGEPYAATILPRFDNMGSPVS--KSALHARCVMRSNNKFEPIMFANSDY 449

Query: 238 DHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDN 272
               P             + +W  ++W E  W   
Sbjct: 450 KVDLPNAGISY---GDASSNVWGGAIWGESTWGAG 481


>gi|327191475|gb|EGE58495.1| hypothetical protein RHECNPAF_300005 [Rhizobium etli CNPAF512]
          Length = 607

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 67/328 (20%), Positives = 132/328 (40%), Gaps = 20/328 (6%)

Query: 1   MQAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPL 60
           M+ GG+L A   W+     GL    V +S+ GEV V+ G +P  +S++ L   + +GRPL
Sbjct: 287 MKYGGTLVAINVWTIPVSTGLQQCLVLISSEGEVIVFQGSDPSSASNWGLIGTFKLGRPL 346

Query: 61  G-KRAIVFVKNDVWIATNNGLISMKNILLQEE--KTNLPLSWPIQEQWEQAIMVAPT--- 114
           G  R ++ V  D+ I T +G++ +   +  +    +   ++  I   W + +    T   
Sbjct: 347 GSDRCLLSVGADLAIMTTDGIVPITKAVQLDRGATSLGAITSRIGPTWRETVAATGTTSQ 406

Query: 115 GWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGD 174
            W +  +  R M +++ P +       +VMN      W  F       +    + LFFG 
Sbjct: 407 EWQLASFPARQMAIVNLPSSFGPY--QYVMNT-ETGAWCRFVGMPASCWATWQDRLFFGA 463

Query: 175 YEGTFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFAR 234
            +GT ++ ++  +DN      + +  +      L   + + +  ++ Q      +     
Sbjct: 464 ADGTLYEAEVGANDNGAAIDALMVGAWSRFGDGLST-KLSKLIGVTAQIGVSTLMYGGIS 522

Query: 235 ANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCL 294
            +Y    P     ++ N+      W  ++W   K+     V K        +    G+ L
Sbjct: 523 VDYQTKVPTALLSSVENS--AAAKWGTAVWGVSKFPGISLVRK------FASAGGAGSAL 574

Query: 295 AVGCVIVSSGK--SINDIQINNAKLLVE 320
           A     + SG   S+++  +    +L E
Sbjct: 575 APTIRALISGSSGSVSEAAVVGGSVLYE 602


>gi|209548341|ref|YP_002280258.1| hypothetical protein Rleg2_0736 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534097|gb|ACI54032.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 607

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 67/328 (20%), Positives = 131/328 (39%), Gaps = 20/328 (6%)

Query: 1   MQAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPL 60
           M+ GG+L A   W+     GL    V +S+ GEV V+ G +P   +++ L   + +GRPL
Sbjct: 287 MKYGGTLVAINVWTIPVSTGLQQCLVLISSEGEVIVFQGSDPSSIANWGLIGTFKLGRPL 346

Query: 61  G-KRAIVFVKNDVWIATNNGLISMKNILLQEE--KTNLPLSWPIQEQWEQAIMVAPT--- 114
           G  R ++ V  D+ I T +G++ +   +  +    +   ++  I   W + +    T   
Sbjct: 347 GSDRCLLSVGADLAIMTTDGIVPITKAVQLDRGATSLGAITARIGPTWRETVAATGTTSQ 406

Query: 115 GWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGD 174
            W +  +  R M +++ P +       +VMN      W  F       +    + LFFG 
Sbjct: 407 EWQLSSFPARQMAIVNLPSSFGPY--QYVMNT-ETGAWCRFVGMPASCWASWQDRLFFGA 463

Query: 175 YEGTFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFAR 234
            +GT ++ ++  +DN      + +  +      L   + + +  ++ Q      +     
Sbjct: 464 GDGTVYEAEVGANDNGVAIDALMVGAWSRYGDGLST-KLSKLIGVTAQIGVSSLMYGGIS 522

Query: 235 ANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCL 294
            +Y    P     ++ NN      W  ++W   K+     V K        +    G+ L
Sbjct: 523 VDYQTKIPTALLSSVENN--AAAKWGTAVWGVSKFPGVSLVRK------FASAGGAGSAL 574

Query: 295 AVGCVIVSSGK--SINDIQINNAKLLVE 320
           A     + SG   S+++  +    +L E
Sbjct: 575 APTIRALISGSSGSVSEAAVVGGSVLYE 602


>gi|116253670|ref|YP_769508.1| hypothetical protein RL3930 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258318|emb|CAK09420.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 607

 Score =  196 bits (497), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 68/328 (20%), Positives = 133/328 (40%), Gaps = 20/328 (6%)

Query: 1   MQAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPL 60
           M+ GG+L A   W+     GL    V +S+ GEV VY G +P  S+++ L   + +GRPL
Sbjct: 287 MKYGGTLIAIGVWTIPVSTGLQQCLVLMSSEGEVIVYQGSDPSSSTNWGLIGTFKLGRPL 346

Query: 61  GK-RAIVFVKNDVWIATNNGLISMKNILLQEE--KTNLPLSWPIQEQWEQAIM---VAPT 114
           G  R  + V  D+ I T +G++ +   +  +    +   ++  I   W + +        
Sbjct: 347 GTERCFLSVGADLAIMTTDGIVPITKAVQLDRGATSLGAITAKIGPTWRETVATAGTTSD 406

Query: 115 GWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGD 174
            W +  +  R M +++ P +       +VMN      W  F       +    + LFFG 
Sbjct: 407 EWQLASFPARQMAIVNLPSSLGPY--QYVMNT-ETGAWCRFVGLAASCWGNWQDRLFFGA 463

Query: 175 YEGTFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFAR 234
            +GT ++ ++  +DN      + +  ++     +   + + +  ++ Q      +     
Sbjct: 464 ADGTVYEAEVGANDNGAAIDALMVGAWNRYGEDM-ASKFSKLIGVTAQIGVSTLMYAGMS 522

Query: 235 ANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCL 294
            +Y    P     T+ NN   +  W +++W   K+     V K        +    G+ L
Sbjct: 523 FDYQTKIPTALLSTVENN--ASAKWGSAIWGVSKFPGLSIVRK------FASAGGAGSAL 574

Query: 295 AVGCVIVSSGK--SINDIQINNAKLLVE 320
           A     + SG   S+++  +    +L E
Sbjct: 575 APTIRALISGASGSVSEAAVIGGSVLYE 602


>gi|15320622|ref|NP_203466.1| hypothetical protein Mx8p52 [Myxococcus phage Mx8]
 gi|15281732|gb|AAK94387.1|AF396866_52 p52 [Myxococcus phage Mx8]
          Length = 536

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 72/331 (21%), Positives = 130/331 (39%), Gaps = 30/331 (9%)

Query: 2   QAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGR--P 59
           +AGG L   ++W+ + G G+    V +S  G+VA++ G +P  S++F L+ ++ +G   P
Sbjct: 217 RAGGHLVGLWNWTYDGGAGMDDSLVAISGGGDVAIWQGTDPASSATFGLRGVWSLGGSPP 276

Query: 60  LGKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPT--GWS 117
            G+R       DV + +  G+  +  ++  E   +  ++  +   +   ++   +  GWS
Sbjct: 277 AGRRIATDYGGDVLVLSRLGVRPLSRLVAGEVDKDTYVTAKVSNLFSALMLTRASLPGWS 336

Query: 118 MILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEG 177
           M L  + N LL++ P       +  VM       W  + +    S  V    L+FG  +G
Sbjct: 337 MQLHPEDNALLVTVPTYPGQPTEQLVMA-LAGRAWFRYRDLPIYSSAVWGGKLYFGTVDG 395

Query: 178 TFWQGDISGSD--------NARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQ-RPY 228
                D    D           P     LS F  +      Q++  +   +L +    P 
Sbjct: 396 RVCVND-GYVDGVLLSEPSAFTPVQWSLLSAFTNLG--SARQKQVQLLRPTLLSESATPS 452

Query: 229 LKLFARANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVV 288
            ++ AR  YD +        +S     +G WD S WD   W+          +Q  Q V 
Sbjct: 453 YEVQARYRYDFAE----LAPVSAMGGGSGTWDGSTWDVDVWSG--------EYQASQQVR 500

Query: 289 AYGNCLAVGCVIVSSGKSINDIQINNAKLLV 319
             G  + V   I   G ++    +    +L 
Sbjct: 501 G-GTGVGVDLAIAIRGTAVARTVLVGIDILF 530


>gi|319783505|ref|YP_004142981.1| hypothetical protein Mesci_3814 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169393|gb|ADV12931.1| hypothetical protein Mesci_3814 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 617

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 72/324 (22%), Positives = 130/324 (40%), Gaps = 10/324 (3%)

Query: 2   QAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDS--SSFSLKAIYHIGRP 59
           Q GGSL  G +WS ++GDG+   CVF++T GE A++ G NP  +  + ++L   Y +  P
Sbjct: 293 QRGGSLLFGATWSLDAGDGIDDKCVFVTTEGEAAIFEGSNPAGTTQAEWNLVGRYDLTDP 352

Query: 60  LGKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLS--WPIQEQWEQAIMVAPTG-W 116
           +GKR  +    D+ +AT  GL+ +   + ++       +    I+  W++      +  W
Sbjct: 353 MGKRGTMRAGGDLIVATKEGLVPISAAINKDAAALSLAAISRNIEPDWKREAARRLSLPW 412

Query: 117 SMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYE 176
            +I W   N  +++ P  +   +    +       W  F  W T+   + +  L+FG  +
Sbjct: 413 EIIKWPDMNYAIVALPVTADGQEAWSFVVNLETGAWCKFVGWATRCIELHDSRLYFGTND 472

Query: 177 GTFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARAN 236
           GT ++ +I+G+DN  P    Y+     +   LG  +    A  +  +      K+    N
Sbjct: 473 GTVFEAEIAGNDNGLPIYYTYVGNPDHMKS-LGGLKTVHQARPTFLSATPYNPKISFSVN 531

Query: 237 YDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAV 296
           Y  S P         +     +WD+  WD  KW                ++   G  +  
Sbjct: 532 YSVSLPPAPPAA---DGGTADLWDSGQWDVAKWD-QAQPVASVGGGQWISIGKTGYVMQP 587

Query: 297 GCVIVSSGKSINDIQINNAKLLVE 320
              I S        +     +  E
Sbjct: 588 QLQITSFLNQRPVTEFVQLDVTFE 611


>gi|218680122|ref|ZP_03528019.1| hypothetical protein RetlC8_15010 [Rhizobium etli CIAT 894]
          Length = 305

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/312 (19%), Positives = 125/312 (40%), Gaps = 20/312 (6%)

Query: 17  SGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLG-KRAIVFVKNDVWIA 75
              GL    V +S+ GEV V+ G +P +++++SL   + +GRPLG  R ++ V  D+ I 
Sbjct: 1   VSTGLQQCLVLISSEGEVIVFQGSDPSNAANWSLIGTFKLGRPLGLDRCLLSVGADLAIM 60

Query: 76  TNNGLISMKNILLQEE--KTNLPLSWPIQEQWEQAIMVAPT---GWSMILWEKRNMLLIS 130
           T +G++ +   +  +    +   ++  I   W + +    T    W +  +  R M +++
Sbjct: 61  TTDGIVPITKAVQLDRGATSLGAITARIGPTWRETVAATGTTSGEWQLSSFPARQMAIVN 120

Query: 131 CPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTFWQGDISGSDNA 190
            P +       +VMN      W  F       +    + LFFG  +GT ++ ++  +DN 
Sbjct: 121 LPSSFGPY--QYVMNT-ETGAWCRFVGMPASCWASWQDRLFFGAADGTVYEAEVGANDNG 177

Query: 191 RPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHSYPEFSKETIS 250
                + +  +      L   + + +  ++ Q      +      +Y    P     ++ 
Sbjct: 178 VAIDALMVGAWSRYGDGLST-KLSKLIGVTAQIGVSTVMYAGISVDYQTKIPTALLSSVE 236

Query: 251 NNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVIVSSGK--SIN 308
           NN      W  ++W   K+     V K        +    G+ LA     + SG   S++
Sbjct: 237 NN--AAAKWGTAIWGVSKFPGISLVRK------FASAGGAGSALAPTIRALISGSSGSVS 288

Query: 309 DIQINNAKLLVE 320
           +  +    +L E
Sbjct: 289 EAAVVGGSVLYE 300


>gi|145642362|ref|ZP_01797923.1| Haemophilus-specific protein, uncharacterized [Haemophilus
           influenzae R3021]
 gi|145272931|gb|EDK12816.1| Haemophilus-specific protein, uncharacterized [Haemophilus
           influenzae 22.4-21]
          Length = 603

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 44/330 (13%), Positives = 93/330 (28%), Gaps = 29/330 (8%)

Query: 2   QAGGSLPAG-FSWSTESGD---GLSTLCVFLSTL-GEVAVY------GGDNPDDSSSFSL 50
           Q G SL      WS   G    GL      LS+  G V +        G        + L
Sbjct: 283 QLGHSLVGRPNQWSVLLGSEQLGLGDEITALSSTVGGVLIIGCRNKIAGLYGSGRDDWVL 342

Query: 51  KAIYHIGRPLGKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIM 110
           K +  IG  +    +      + I + NG+  +       +     +    +  +++   
Sbjct: 343 KEVSSIG--IVPETLQTTFVPLAI-SKNGITRIDQTEQFGDFRLSEVDANRKLGFDKQHY 399

Query: 111 VAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENL 170
                 +     K N +     +           + +  + + ++       +    E +
Sbjct: 400 NIAYTST---KPKSNQIRFYSREGR-HICMMLQADGSTRSTFFTYPEILCGVWQS-PEQV 454

Query: 171 FFGDYEGTFWQG-DISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYL 229
           +    +G  ++  D   S + +P   I    F+         +    A L      +  L
Sbjct: 455 YLAFDDGKVYRQSDKCYSFSGKPIDWIIKMAFNHCGSPT-LIKSWHSAELQATTEGKSKL 513

Query: 230 KLFARANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVA 289
                 +Y+ +Y   +           G W++S W++  W      +    +        
Sbjct: 514 SYRFDLDYNSNYHASTLSKDLQITGGGGRWNDSFWNDFLW-SAEDYSTPTFYL------- 565

Query: 290 YGNCLAVGCVIVSSGKSINDIQINNAKLLV 319
            G    +      S       +I+   L  
Sbjct: 566 SGYSRNIALSFSGSSIYSPQFEISGLILNY 595


>gi|319776218|ref|YP_004138706.1| hypothetical protein HICON_18210 [Haemophilus influenzae F3047]
 gi|317450809|emb|CBY87031.1| Conserved hypothetical protein [Haemophilus influenzae F3047]
          Length = 661

 Score =  137 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 89/318 (27%), Gaps = 28/318 (8%)

Query: 13  WSTESGD---GLSTLCVFLSTL-GEVAVY------GGDNPDDSSSFSLKAIYHIGRPLGK 62
           WS   G    GL      LS+  G V +        G        + LK +  IG  +  
Sbjct: 353 WSVLLGSEQLGLGDEITALSSTVGGVLIIGCRNKIAGLYGSGRDDWVLKEVSSIG--IVP 410

Query: 63  RAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMILWE 122
             +      + I + NG+  +       +     +    +  +++         +     
Sbjct: 411 ETLQTTFVPLAI-SKNGITRIDQTEQFGDFRLSEVDANRKLGFDKQHYNITYTST---KP 466

Query: 123 KRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTFWQG 182
           K N +     +           + +  + + ++       +    E ++    +G  ++ 
Sbjct: 467 KSNQIRFYSKEGR-HICMMLQADGSTRSTFFTYPEILRGVWQS-PEQVYLAFDDGKVYRQ 524

Query: 183 -DISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHSY 241
            D   S + +P   I    F+         +    + L      +  L      +Y+ +Y
Sbjct: 525 SDKCYSFSGKPIDWIIKMAFNHCGSPT-LIKSWHSSELQATTEGKSKLSYRFDLDYNSNY 583

Query: 242 PEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVIV 301
              +           G W++S W++  W      +    +         G    +     
Sbjct: 584 HASTLSKDLQIAGGGGRWNDSFWNDFLW-SAEDYSTPTFYL-------SGYSRNIALSFS 635

Query: 302 SSGKSINDIQINNAKLLV 319
            S       +I+   L  
Sbjct: 636 GSSIYSPQFEISGLILNY 653


>gi|218674218|ref|ZP_03523887.1| hypothetical protein RetlG_23247 [Rhizobium etli GR56]
          Length = 457

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 9/174 (5%)

Query: 1   MQAGGSLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPL 60
           M+ GG+L A   W+     GL    V +S+ GEV V+ G +P  ++++ L   + +GRPL
Sbjct: 287 MKYGGTLVAINVWTIPVATGLQQCLVLISSEGEVIVFQGSDPSSAANWGLIGTFKLGRPL 346

Query: 61  G-KRAIVFVKNDVWIATNNGLISMKNILLQEE--KTNLPLSWPIQEQWEQAIMVAPT--- 114
           G  R ++ V  D+ I T +G++ +   +  +    +   ++  I   W + +  + T   
Sbjct: 347 GSDRCLLSVGADLAIMTTDGIVPITKAVQLDRGATSLGAITARIGPTWRETVAASGTSSQ 406

Query: 115 GWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANE 168
            W +  +  R M +++ P +       +VMN      W  F       +    +
Sbjct: 407 EWQLSSFPARQMAIVNLPSSYGPY--QYVMNT-ETGAWCRFVGMPASCWATWQD 457


>gi|170719091|ref|YP_001784242.1| hypothetical protein HSM_0910 [Haemophilus somnus 2336]
 gi|168827220|gb|ACA32591.1| Haemophilus-specific protein, uncharacterized [Haemophilus somnus
           2336]
          Length = 659

 Score =  114 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 91/329 (27%), Gaps = 27/329 (8%)

Query: 2   QAGGSLPAGFS-WSTESGD---GLSTLCVFLSTL-GEVAVY------GGDNPDDSSSFSL 50
           Q G SL    + W+   G    G+      LS+  G V +                 + L
Sbjct: 339 QFGHSLVGKPTHWAVLLGSEHFGVGDEITALSSTTGGVLLIGCRHKTTALYGSTRDDWVL 398

Query: 51  KAIYHIGRPLGKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIM 110
           K I  +G  +    +      + I + +G+I +       +          +  ++    
Sbjct: 399 KDIAKVG--IKSGTLQATFIPIAI-SRHGIIRVDATEQFGDFKLSETDSGRKLGFKPIEN 455

Query: 111 VAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENL 170
                 +     K N +     +N+         + +  + + ++       +   +   
Sbjct: 456 NIVFSST---KAKANQVRFYS-ENAFHICMMLQPDGSTKSTYFTYPEKLKGVWQSHHNTF 511

Query: 171 FFGDYEGTFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLK 230
              D    + Q D   S   +P        F+     +   +    A L   A     ++
Sbjct: 512 LAFDDGKVYRQSDDCFSFAGKPIEWTVKMAFNHCGSPVHI-KSWKSAELQATAQGVLSVQ 570

Query: 231 LFARANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAY 290
                +Y+  +   +     +     G W+ S W++  W      +   L+         
Sbjct: 571 YRFDLDYNADFHAVNLAQALSVIGYGGRWNESYWNDFLW-STQEYSTPVLYL-------S 622

Query: 291 GNCLAVGCVIVSSGKSINDIQINNAKLLV 319
           G    +      S       +++   L  
Sbjct: 623 GYSRNLSLSFAGSDLYAPQFELSGLVLNY 651


>gi|113461516|ref|YP_719585.1| hypothetical protein HS_1373 [Haemophilus somnus 129PT]
 gi|112823559|gb|ABI25648.1| hemophilus-specific protein, uncharacterized [Haemophilus somnus
           129PT]
          Length = 659

 Score =  112 bits (280), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 92/329 (27%), Gaps = 27/329 (8%)

Query: 2   QAGGSLPAGFS-WSTESGD---GLSTLCVFLSTL-GEVAVY------GGDNPDDSSSFSL 50
           Q G SL    + W+   G    G+      LS+  G V +                 + L
Sbjct: 339 QFGHSLVGKPTHWAVLLGSEHFGVGDEITALSSTTGGVLLIGCRHKTTALYGSTRDDWVL 398

Query: 51  KAIYHIGRPLGKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIM 110
           K I  +G  +    +      + I + +G+I +       +          +  ++    
Sbjct: 399 KDIAKVG--IKSGTLQATFIPIAI-SRHGIIRVDATEQFGDFKLSETDSGRKLGFKPIEN 455

Query: 111 VAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENL 170
                 +     K N +     +N+         + +  + + ++       +   +   
Sbjct: 456 NIVFSST---KAKANQVRFYS-ENAFHICMMLQPDGSTKSTYFTYPEKLKGVWQSHHNTF 511

Query: 171 FFGDYEGTFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLK 230
              D    + Q D   S   +P        F+     +   +    A L   A     ++
Sbjct: 512 LAFDDGKVYRQSDDCFSFAGKPIEWTVKMAFNHCGSPVHI-KSWKSAELQATAQGVLSVQ 570

Query: 231 LFARANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAY 290
             +  +Y+  +   +     +     G W+ S W++  W      +   L+         
Sbjct: 571 YRSDLDYNADFHAVNLARELSVIGHGGRWNESYWNDFLW-STQEYSTPVLYL-------S 622

Query: 291 GNCLAVGCVIVSSGKSINDIQINNAKLLV 319
           G    +      S       +++   L  
Sbjct: 623 GYSRNLSLSFAGSDLYAPQFELSGLVLNY 651


>gi|228937959|ref|ZP_04100586.1| hypothetical protein bthur0008_6350 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970839|ref|ZP_04131479.1| hypothetical protein bthur0003_6260 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977413|ref|ZP_04137808.1| hypothetical protein bthur0002_6280 [Bacillus thuringiensis Bt407]
 gi|228782390|gb|EEM30573.1| hypothetical protein bthur0002_6280 [Bacillus thuringiensis Bt407]
 gi|228788964|gb|EEM36903.1| hypothetical protein bthur0003_6260 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821750|gb|EEM67751.1| hypothetical protein bthur0008_6350 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326938437|gb|AEA14333.1| hypothetical protein CT43_CH0641 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 502

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 92/312 (29%), Gaps = 34/312 (10%)

Query: 16  ESGDGLSTLCV-FLSTLGEVAVYG-----GDNPDDSSSFSLKAIYHIGRPLGKRAIVFVK 69
           +     +   V  ++    + ++            +  + L  I      +   +I  V 
Sbjct: 202 DVASNENDEIVGLVTFRNSLIIFCRHSIWALYGKTTYDYELVKINTPTGCMAPESIQVVG 261

Query: 70  NDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMILWEKRNMLLI 129
           N ++  ++  +  +         +   ++  I+       +          + +    L 
Sbjct: 262 NQIFYLSDTHVYGLFAND-FNMVSAQIITKQIESTMRAIPLTEKNKAVAGYF-EGKYYLS 319

Query: 130 SCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFG-DYEGTFWQGDISGSD 188
                +L+ D+  V        W+ + N     +V  + N +FG +     +  +    D
Sbjct: 320 FPNGKTLVYDELLVC-------WTVYSNIKADVFVNYDGNFYFGSNKNAYVFHPE--YHD 370

Query: 189 NARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHSYPEFSKET 248
           + +P      + +         ++      + L + Q    +L  + +++    + ++  
Sbjct: 371 DGKPIPFRMETKYFDFGLMTQDKKI---HRIWLHSNQPNGYRLGVKLDFETKQVDGTRP- 426

Query: 249 ISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVIVSSGKSIN 308
              N  +   WD ++WD+  +        +         +          +I+     I 
Sbjct: 427 ---NAANVSNWDEAIWDQNTFDRIEMYINRLRVNNRTKKIG---------MIIEDVTHIR 474

Query: 309 DIQINNAKLLVE 320
              +    +  E
Sbjct: 475 PFVVYGIGVQYE 486


>gi|75762343|ref|ZP_00742221.1| hypothetical protein RBTH_08417 [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74490168|gb|EAO53506.1| hypothetical protein RBTH_08417 [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 491

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/312 (9%), Positives = 92/312 (29%), Gaps = 34/312 (10%)

Query: 16  ESGDGLSTLCV-FLSTLGEVAVYG-----GDNPDDSSSFSLKAIYHIGRPLGKRAIVFVK 69
           +     +   V  ++    + ++            +  + L  I      +   +I  V 
Sbjct: 191 DVASNENDEIVGLVTFRNSLIIFCRYSIWALYGKTTYDYELVKINTPTGCMAPESIKVVG 250

Query: 70  NDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMILWEKRNMLLI 129
           N ++  ++  +  +         +   ++  I+       +   +      + +    L 
Sbjct: 251 NQIFYLSDTHVYGLFAND-FNMVSAQIITKQIESTMRAIPLTEKSKAVAGYF-EGKYYLS 308

Query: 130 SCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFG-DYEGTFWQGDISGSD 188
                +L+ D+  V        W+ + N     +V  + N +FG +     +  +    D
Sbjct: 309 FPNGKTLVYDELLVC-------WTVYSNIKADVFVNYDGNFYFGSNKNAYVFHPE--YHD 359

Query: 189 NARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHSYPEFSKET 248
           + +P      + +         ++      + L + Q    +L  + +++      ++  
Sbjct: 360 DGKPIPFRMETKYFDFGLMTQDKKI---HRIWLHSNQPNGYRLGVKLDFETKQVNGTRP- 415

Query: 249 ISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVIVSSGKSIN 308
              N  +   WD ++WD+  +        +         +          +I+     I 
Sbjct: 416 ---NAANVSNWDEAIWDQNTFDRIEMYINRLRVNNRTKKIG---------MIIEDVTHIR 463

Query: 309 DIQINNAKLLVE 320
              +    +  E
Sbjct: 464 PFVVYGIGVQYE 475


>gi|237748184|ref|ZP_04578664.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
 gi|229379546|gb|EEO29637.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13]
          Length = 478

 Score =  105 bits (263), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 30/297 (10%), Positives = 78/297 (26%), Gaps = 42/297 (14%)

Query: 25  CVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNGLISMK 84
            V L   G    Y   +P   ++  L+           +++  V  D++  ++ G  S+ 
Sbjct: 218 LVVLMRDGAQVWYADPDP---TAMCLEETVENVGTSFPQSLATVAGDLYFLSDFGFRSIT 274

Query: 85  NILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVM 144
              L     +L +  P+       +         + +      L +  +   +     V 
Sbjct: 275 TQQLVSRLDDLDIGSPVDTLVRPVLQDVKGAPKAVYFYGTGQYLCAIDRQMFVYS---VS 331

Query: 145 NVAHNNRWSSF-HNWFTQSYVVANENLFFGDYEGTFWQGDISGSDNARPFIGIYLSPFHA 203
             +    WS +       +    N  L+    +  +   + + +D+ + +  +   P+  
Sbjct: 332 RTSRIAAWSRYDLPVTVDAMDELNGVLYIRSGDDVYKLDEEAHTDDGQEYEVVLELPYMN 391

Query: 204 IDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHSYPEFSKETISNNPMDNGIWDNSL 263
                G  +R     L +Q             +  +      +  +  N           
Sbjct: 392 FKTP-GILKRVYGVDLVMQGE----CYFSMGFDVRNHEAVTDEVRVVGN----------- 435

Query: 264 WDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVIVSSGKSINDIQINNAKLLVE 320
                +   L   +             G   +          +    Q++   +  E
Sbjct: 436 ----TYGGGLIPLEVA-----------GTEFSPRFR----NVTNQPFQLDALTIYYE 473


>gi|237746345|ref|ZP_04576825.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
 gi|229377696|gb|EEO27787.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
          Length = 464

 Score =  103 bits (256), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 75/278 (26%), Gaps = 39/278 (14%)

Query: 44  DSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQE 103
           D ++ SL            +++  V  D++  ++ G  S+    L     +L +  P+  
Sbjct: 220 DPTAMSLVETVENVGSSYPQSLATVAGDLYFLSDFGFRSITTQQLVARLDDLDIGSPVDM 279

Query: 104 QWEQAIMVAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSF-HNWFTQS 162
                +         + +      L +  +   +     V   +    WS +   +   +
Sbjct: 280 LVRPCLKALKGTPKAVYFYGTGQYLCAIDRQMFVYS---VSRTSKIAAWSRYELPFTVDA 336

Query: 163 YVVANENLFFGDYEGTFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQ 222
               +  L+    +  +   + + +D+ + +  I   P+       G  +R     L +Q
Sbjct: 337 MDELDGVLYLRSGDDVYKLDEEAHTDDGKEYEVILELPYMNFKTP-GVLKRVYGVDLVMQ 395

Query: 223 AYQRPYLKLFARANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQ 282
                        +  +      +  ++ N                +   L   +     
Sbjct: 396 GE----CYFSMGFDVRNFEAVTDEVRVAGN---------------TYGGGLIPLEVA--- 433

Query: 283 FCQNVVAYGNCLAVGCVIVSSGKSINDIQINNAKLLVE 320
                   G   A          +    Q++   +  E
Sbjct: 434 --------GTEFAPRFR----NVTDQPFQLDALTIYYE 459


>gi|228905773|ref|ZP_04069685.1| hypothetical protein bthur0014_68150 [Bacillus thuringiensis IBL
           4222]
 gi|228853868|gb|EEM98614.1| hypothetical protein bthur0014_68150 [Bacillus thuringiensis IBL
           4222]
          Length = 221

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 24/225 (10%), Positives = 67/225 (29%), Gaps = 27/225 (12%)

Query: 97  LSWPIQEQWEQAIMVAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFH 156
           ++  I+       +          + +    L      +L+ D+  V        W+ + 
Sbjct: 7   ITKQIESTMRAIPLTEKNKAVAGYF-EGKYYLSFPNGKTLVYDELLVC-------WTVYS 58

Query: 157 NWFTQSYVVANENLFFG-DYEGTFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRAC 215
           N     +V  + N +FG +     +  +    D+ +P      + +         ++   
Sbjct: 59  NIKADVFVNYDGNFYFGSNKNAYVFHPE--YHDDGKPIPFRMETKYFDFGLMTQDKKI-- 114

Query: 216 VAHLSLQAYQRPYLKLFARANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFV 275
              + L + Q    +L  + +++      ++     N  +   WD ++WD+  +      
Sbjct: 115 -HRIWLHSNQPNGYRLGVKLDFETKQVNGTRP----NAANVSNWDEAIWDQNTFDRIEMY 169

Query: 276 TKKKLFQFCQNVVAYGNCLAVGCVIVSSGKSINDIQINNAKLLVE 320
             +         +          +I+     I    +    +  E
Sbjct: 170 INRLRVSNRTKKIG---------MIIEDVTHIRPFVVYGIGVQYE 205


>gi|134095452|ref|YP_001100527.1| hypothetical protein HEAR2272 [Herminiimonas arsenicoxydans]
 gi|133739355|emb|CAL62405.1| Hypothetical protein HEAR2272 [Herminiimonas arsenicoxydans]
          Length = 463

 Score = 90.2 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 21/278 (7%), Positives = 72/278 (25%), Gaps = 39/278 (14%)

Query: 44  DSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQE 103
           D ++ +              ++  V  D++  ++ G  S+    L +++ ++ +  PI  
Sbjct: 219 DPTNMAFDDNVENVGTSYPNSLSTVGGDLFFLSDFGFRSITTSRLIDKREDVDVGSPIDP 278

Query: 104 QWEQAIMVAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFH-NWFTQS 162
             + A+           +      + +  +   +     +   +    WS +   +   +
Sbjct: 279 LVKGALAGMAGAPRAKYYYGTGQYMCAIDRTLFVYS---LSRTSKIAAWSRYRMPFDVDA 335

Query: 163 YVVANENLFFGDYEGTFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQ 222
                  L+    +  +   +   +D+   +  +   P+       G  +R     + + 
Sbjct: 336 IAERLGVLYLRSGDDVYRFDEDIKTDDGVEYEVLLEMPYMDFKTP-GVLKRITGIDIVM- 393

Query: 223 AYQRPYLKLFARANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQ 282
              + Y  L        +  +  +                          +         
Sbjct: 394 -EGQCYFSLGWDVRNALALTDEVRIIG-----------------NTRGGGMIP------- 428

Query: 283 FCQNVVAYGNCLAVGCVIVSSGKSINDIQINNAKLLVE 320
               +   G   +               ++++  L  E
Sbjct: 429 ----IECCGTEFSPRFR----NLDNKPFRLDSLTLYYE 458


>gi|209548752|ref|YP_002280669.1| hypothetical protein Rleg2_1149 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534508|gb|ACI54443.1| hypothetical protein Rleg2_1149 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 606

 Score = 84.8 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 71/258 (27%), Gaps = 27/258 (10%)

Query: 30  TLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNGLISMKNILL- 88
                 ++ G +P +   F           + ++    + ND    T  GL ++   +  
Sbjct: 319 GRLRTYIWQGYDPGEIGGFIPVKTLA-VGLIHQKLRQSMPNDEAFVTPFGLRTLSVQVQT 377

Query: 89  --------QEEKTNLPLSWPIQEQWEQAIMVAPTGWSMILWEKRNMLLISCPKNSLLSDK 140
                        +   S  I+                  +++  M       +     +
Sbjct: 378 DGVEVTSDIGSTQDGEFSDKIRALLADDDSYRK--ARSFFYQRDGM--FGYKLDDTGL-Q 432

Query: 141 TFVMNVAHNNRWSSFHNW--FTQSYVVANEN--LFFGDYEGTFWQGDI------SGSDNA 190
            +V+N      W+ F  +     S+V   +N  +     +   +          S +D+ 
Sbjct: 433 VYVLNDKAKG-WTEFQGYFADAASFVALGDNRLMILRGEQAYLYANGTDALVGESYADDE 491

Query: 191 RPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHSYPEFSKETIS 250
            P  G++  P+ +   R G +    +            L         +        T  
Sbjct: 492 EPIFGMWWLPWLSRSARWGNRA-VEILLEDTAPNVTLTLDRMIDFREQNVVTTQVTVTGG 550

Query: 251 NNPMDNGIWDNSLWDEVK 268
            +  D  +WD  +WD   
Sbjct: 551 GSKWDEALWDVGMWDSGT 568


>gi|153212099|ref|ZP_01947916.1| hypothetical protein A55_1878 [Vibrio cholerae 1587]
 gi|124116895|gb|EAY35715.1| hypothetical protein A55_1878 [Vibrio cholerae 1587]
          Length = 665

 Score = 84.8 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 93/326 (28%), Gaps = 43/326 (13%)

Query: 12  SWSTESGDGL----STLCVFLSTLGEVAVYGGDN------PDDSSSFSLKAIYHIGRPLG 61
           SWS   G         +  F S  G   +  G         +   ++ +K +      + 
Sbjct: 357 SWSGLLGAEQFSTGDEITGFKSIQGGAMIIAGSRSINALFGEVRDNWVIKRLTSKVG-VK 415

Query: 62  KRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWP-------IQEQWEQAIMVAPT 114
              +      V   T NGLI + +  +  +     +          I+  +  AI   P 
Sbjct: 416 PGMLTSTFVPVA-QTTNGLIRVDSTDVFGDLIASEIQANKQAPKAAIRPYF--AIANIPE 472

Query: 115 GWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGD 174
              +  + ++  L++    ++      F         W             + +NLFF  
Sbjct: 473 SNQVRFYGEKAHLIVEIQPDAKTRTTEFTYPQPLRGVW------------QSPDNLFFAF 520

Query: 175 YEGTFWQGDIS-GSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFA 233
            +G  ++ + +  S    P        +          +    A L +       LK +A
Sbjct: 521 DDGRIYRQNAAVNSFAGEPIFWDMRLAYSHCGTPT-VVKNWKSAELQMNVANALSLKFYA 579

Query: 234 RANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNC 293
             +Y       +           G W+ S W++  WT   + T          V   GN 
Sbjct: 580 DLDYGTPDKSQTLVNTGIAYGGGGRWNESDWNDFYWTAPDYATPI--------VSLSGNS 631

Query: 294 LAVGCVIVSSGKSINDIQINNAKLLV 319
             +   +  S     +  I+   L  
Sbjct: 632 RNISISLTGSSDHEENFDISGFILNY 657


>gi|225155407|ref|ZP_03723899.1| hypothetical protein ObacDRAFT_9455 [Opitutaceae bacterium TAV2]
 gi|224803863|gb|EEG22094.1| hypothetical protein ObacDRAFT_9455 [Opitutaceae bacterium TAV2]
          Length = 592

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 3/97 (3%)

Query: 26  VFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNGLISMKN 85
           + +   G V      +P    ++S+  +  I        +V V  D++  +  G+ S+  
Sbjct: 235 LGVFCAGSVWSIDSSDP-VVGNWSIMKVTDIAGCAEGNTVVAVGQDIYFLSQWGVCSLGA 293

Query: 86  ILLQEEK-TNLPLSWPIQEQWEQAI-MVAPTGWSMIL 120
           +   +       +S PIQ   ++         W+ + 
Sbjct: 294 LQTTDSISPASTISAPIQPFLDRINWSQIRNAWATVW 330


>gi|218673258|ref|ZP_03522927.1| hypothetical protein RetlG_17531 [Rhizobium etli GR56]
          Length = 94

 Score = 42.4 bits (98), Expect = 0.080,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 10/91 (10%)

Query: 232 FARANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYG 291
               +Y    P     ++ NN      W  ++W   K+     V K        +    G
Sbjct: 7   GISVDYQTKVPTALLSSVENN--AAAKWGTAVWGVAKFPGISLVRK------FASAGGAG 58

Query: 292 NCLAVGCVIVSSGK--SINDIQINNAKLLVE 320
           + LA     + SG   S+++  +    +L E
Sbjct: 59  SALAPTIRALISGSSGSVSEAAVVGGSVLYE 89


>gi|115376424|ref|ZP_01463660.1| dipeptidyl peptidase IV [Stigmatella aurantiaca DW4/3-1]
 gi|310823227|ref|YP_003955585.1| peptidase, s9b (dipeptidyl peptidase iv) subfamily [Stigmatella
           aurantiaca DW4/3-1]
 gi|115366556|gb|EAU65555.1| dipeptidyl peptidase IV [Stigmatella aurantiaca DW4/3-1]
 gi|309396299|gb|ADO73758.1| Peptidase, S9B (Dipeptidyl peptidase IV) subfamily [Stigmatella
           aurantiaca DW4/3-1]
          Length = 720

 Score = 40.9 bits (94), Expect = 0.29,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 40/120 (33%), Gaps = 14/120 (11%)

Query: 18  GDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKA------IYHIGRPLGKRAIVFVKND 71
           G G   L  +L     +   GG NP +   + +K       +   G  L   A+      
Sbjct: 374 GSGFQMLVNYLPKEDVLYFLGGPNPTERYLWRVKGGGEPERVTSGGPALEGAAVSGRGG- 432

Query: 72  VWIATNNGLISMKNI-------LLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMILWEKR 124
           + + T  G   ++             E  ++    PIQ ++E   +     W+ I+  + 
Sbjct: 433 LMVITTEGPTRLRRAYVHRSDGTRLGELPSVAREPPIQPRFELRQVGPERFWTAIIRPQN 492


>gi|297836494|ref|XP_002886129.1| hypothetical protein ARALYDRAFT_480680 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331969|gb|EFH62388.1| hypothetical protein ARALYDRAFT_480680 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1194

 Score = 40.5 bits (93), Expect = 0.37,   Method: Composition-based stats.
 Identities = 10/88 (11%), Positives = 29/88 (32%), Gaps = 1/88 (1%)

Query: 21  LSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNGL 80
           +      + +    +V+      D S+        +G  + +  +  +  ++ +   NGL
Sbjct: 681 VDDTGCGIESSKWDSVFESFEQADPSTTRTHGGTGLGLCIVRNLVNKMGGEIKVVQKNGL 740

Query: 81  ISMKNILLQEEKTNLPLSWPIQEQWEQA 108
            ++  + L            IQ  + + 
Sbjct: 741 GTLMRLYLILSTP-ETADQNIQPDFSKY 767


>gi|312116010|ref|YP_004013606.1| hypothetical protein Rvan_3322 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311221139|gb|ADP72507.1| hypothetical protein Rvan_3322 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 474

 Score = 39.3 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 14/181 (7%), Positives = 45/181 (24%), Gaps = 7/181 (3%)

Query: 25  CVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNGLISMK 84
            +       + ++         +F+          + +  +  V + +    +NG++   
Sbjct: 197 ALIALGEASLEIWENA-GTTPFAFAPIRADIDIGCIAEHTVASVADSLLFVDHNGVVR-- 253

Query: 85  NILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVM 144
              L   +     +  I+                +          +        +     
Sbjct: 254 --QLTGSEPQRISTHAIERAIAALSWDERRSLYAVYTHFNGHDFYAITSAYWTFEFDVAT 311

Query: 145 NVAHNNRWSSFHNWFTQSYVVANENLFFGD--YEGTFWQGDISGSDNARPFIGIYLSPFH 202
            + H         W  + +   N  +  G           D S +++ +P++ +  S   
Sbjct: 312 GLWHERASGDLEYWTARGHASFNGKVVIGSSLDASLHVLDDASYTESGQPYLFVAQSAPL 371

Query: 203 A 203
            
Sbjct: 372 H 372


>gi|18398532|ref|NP_565424.1| ATHK1 (histidine kinase 1); histidine phosphotransfer kinase/
           osmosensor/ protein histidine kinase [Arabidopsis
           thaliana]
 gi|332278154|sp|Q9SXL4|AHK1_ARATH RecName: Full=Histidine kinase 1; AltName: Full=Arabidopsis
           histidine kinase 1; Short=AtHK1; AltName: Full=Protein
           AUTHENTIC HIS-KINASE 1
 gi|330251597|gb|AEC06691.1| histidine kinase 1 [Arabidopsis thaliana]
          Length = 1207

 Score = 39.3 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 10/88 (11%), Positives = 30/88 (34%), Gaps = 1/88 (1%)

Query: 21  LSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNGL 80
           +      +      +V+      D S+        +G  + +  +  +  ++ +   NGL
Sbjct: 692 VDDTGCGIDPSKWDSVFESFEQADPSTTRTHGGTGLGLCIVRNLVNKMGGEIKVVQKNGL 751

Query: 81  ISMKNILLQEEKTNLPLSWPIQEQWEQA 108
            ++  + L     +  +   IQ  + + 
Sbjct: 752 GTLMRLYLILSTPD-TVDQNIQPDFSKY 778


>gi|4586626|dbj|BAA32085.1| histidine kinase 1 [Arabidopsis thaliana]
          Length = 1207

 Score = 39.3 bits (90), Expect = 0.68,   Method: Composition-based stats.
 Identities = 10/88 (11%), Positives = 30/88 (34%), Gaps = 1/88 (1%)

Query: 21  LSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNGL 80
           +      +      +V+      D S+        +G  + +  +  +  ++ +   NGL
Sbjct: 692 VDDTGCGIDPSKWDSVFESFEQADPSTTRTHGGTGLGLCIVRNLVNKMGGEIKVVQKNGL 751

Query: 81  ISMKNILLQEEKTNLPLSWPIQEQWEQA 108
            ++  + L     +  +   IQ  + + 
Sbjct: 752 GTLMRLYLILSTPD-TVDQNIQPDFSKY 778


>gi|258573967|ref|XP_002541165.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237901431|gb|EEP75832.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 365

 Score = 39.3 bits (90), Expect = 0.81,   Method: Composition-based stats.
 Identities = 5/106 (4%), Positives = 22/106 (20%), Gaps = 1/106 (0%)

Query: 129 ISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTFWQGDISGSD 188
                +   +   F+        +  +     +         +  D + + +      +D
Sbjct: 106 FEKDDDDSQTQYNFICGNDECGEYDDYDGIDARFDDTYYAQEYEEDSDDS-FADLYGNND 164

Query: 189 NARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFAR 234
           +       + S        +   +   +               + R
Sbjct: 165 DKATNEASFESDMFTFTTDVRMPKVGDLIDPDGGPGGYVEAVFWLR 210


>gi|293375585|ref|ZP_06621859.1| nucleic acid-binding domain protein [Turicibacter sanguinis PC909]
 gi|292645802|gb|EFF63838.1| nucleic acid-binding domain protein [Turicibacter sanguinis PC909]
          Length = 1736

 Score = 39.0 bits (89), Expect = 0.89,   Method: Composition-based stats.
 Identities = 23/199 (11%), Positives = 54/199 (27%), Gaps = 18/199 (9%)

Query: 2    QAGGSLPAGFSWSTESGD---GLSTLCVFLSTLGEVA-VYGGDNPDDSSSFSLKAIYHIG 57
            +  G +   ++ +        G     V ++T    + +  G +    +      +Y   
Sbjct: 1082 KMNGYVTGNYAGNMNYVTELVGQEGGVVKINTETITSEILTGIDVLIITDPENDFVYSNE 1141

Query: 58   RPLGKRAIVFVKNDVWIATNNGLISMKNIL---LQEEKTNLPLSWPIQEQWEQAIMVAPT 114
              +  +A V    D+ I +               Q  K    +   I+   +Q +     
Sbjct: 1142 EVVAIKAFVEAGGDLIITSKADYKDQTGQFGNAAQGNKVLEAIGATIRFNDDQVVDPVEN 1201

Query: 115  GWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLF--- 171
            G        +   L     N        +         S   ++   S+   N  L    
Sbjct: 1202 G-------GQAYRLYFDDYNEESPYTKGIDFGKIEQGNSKNTDYK-FSFYSGNSVLVPAD 1253

Query: 172  FGDYEGTFWQGDISGSDNA 190
              + +      + + +D+A
Sbjct: 1254 ATNVDVVVKGHETTTNDDA 1272


>gi|315570638|gb|ADU33323.1| pectin methylesterase [Dendroctonus ponderosae]
 gi|332375344|gb|AEE62813.1| unknown [Dendroctonus ponderosae]
          Length = 388

 Score = 39.0 bits (89), Expect = 0.94,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 36/124 (29%), Gaps = 15/124 (12%)

Query: 45  SSSFSLKAIY-HIGRPLGKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWP--- 100
           S+ F L+ +  H G    +   +    D     NN  +S+++ +                
Sbjct: 177 SNDFQLQGVTIHNGATEAQALAIKTSGDKIHLMNNNFMSIQDTVGLGIDEGENEKAERVL 236

Query: 101 -----IQEQWEQA------IMVAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHN 149
                I+ + +        +    T  ++   EK   ++         +    V+N    
Sbjct: 237 IHMCYIEGELDYVIGGASAVFNMVTFNTVASVEKEQYVIFMPDTAPGRTYGFLVINSNIT 296

Query: 150 NRWS 153
              S
Sbjct: 297 GDAS 300


>gi|156743150|ref|YP_001433279.1| WD-40 repeat-containing protein [Roseiflexus castenholzii DSM
           13941]
 gi|156234478|gb|ABU59261.1| WD-40 repeat protein [Roseiflexus castenholzii DSM 13941]
          Length = 1157

 Score = 39.0 bits (89), Expect = 0.98,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 35/154 (22%), Gaps = 7/154 (4%)

Query: 25  CVFLSTLGEVAVYGGDNPDDSSSFSLKAIY----HIGRPLGKRAIVFVKND---VWIATN 77
            + LS  G      G +P     + L         +  P G    + +  D   + I  N
Sbjct: 820 LLALSRDGARLATAGADPTSLRLWDLAGTTLTARELAGPGGTNTAMALSRDGRRLAIGDN 879

Query: 78  NGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMILWEKRNMLLISCPKNSLL 137
            G   + ++               +                   +     L +    S  
Sbjct: 880 QGATFVYDLTNLSASPQRLSGLGGRSGIRSLTFSPDGRLLATGNDDSQARLYNLASGSGT 939

Query: 138 SDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLF 171
             +        +  +SS   W           L+
Sbjct: 940 YTRERTRGALTSITFSSDGRWLAYGSAGGQVRLW 973


>gi|307545224|ref|YP_003897703.1| hypothetical protein HELO_2634 [Halomonas elongata DSM 2581]
 gi|307217248|emb|CBV42518.1| hypothetical protein HELO_2634 [Halomonas elongata DSM 2581]
          Length = 547

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 17  SGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIAT 76
            G   ++  + + T G+ ++  G +P   S   L  +Y     + KR+IV +      A+
Sbjct: 309 VGLASTSAGLVVLTTGQPSLVTGSSPAAISQMKL-DVYQ--SCVSKRSIVEMGGYALYAS 365

Query: 77  NNGLISMKN 85
            +GL+++  
Sbjct: 366 PDGLVAVGG 374


>gi|254488980|ref|ZP_05102185.1| C4-dicarboxylate transport sensor protein DctB [Roseobacter sp.
           GAI101]
 gi|214045849|gb|EEB86487.1| C4-dicarboxylate transport sensor protein DctB [Roseobacter sp.
           GAI101]
          Length = 413

 Score = 39.0 bits (89), Expect = 1.0,   Method: Composition-based stats.
 Identities = 7/112 (6%), Positives = 25/112 (22%), Gaps = 10/112 (8%)

Query: 65  IVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMILWEKR 124
           +  +     +  +    ++              S  ++  +  A+    T +S+I     
Sbjct: 94  VEEIGAASLMLYDIDGRTVAATDRN---RLGS-SHRLEPYFVDAVRANATVFSVIPRSTG 149

Query: 125 NMLLISCPKNSLLSDKTFVMN-----VAHNNRWSSFHNWFTQSYVVANENLF 171
                   +         V+            W+   +          + + 
Sbjct: 150 GYRFFYSRRIQEGGATLGVIAAEVDLQRFERAWAGISD-AVIVTDSTGDIIM 200


>gi|325836749|ref|ZP_08166216.1| nucleic acid-binding domain protein [Turicibacter sp. HGF1]
 gi|325491127|gb|EGC93416.1| nucleic acid-binding domain protein [Turicibacter sp. HGF1]
          Length = 1736

 Score = 38.2 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/199 (11%), Positives = 54/199 (27%), Gaps = 18/199 (9%)

Query: 2    QAGGSLPAGFSWSTESGD---GLSTLCVFLSTLGEVA-VYGGDNPDDSSSFSLKAIYHIG 57
            +  G +   ++ +        G     V ++T    + +  G N    +      +Y   
Sbjct: 1082 KMNGYVTGNYAGNMNYVTELVGQEGGVVKINTETITSEILTGINVLIITDPENDFVYSNE 1141

Query: 58   RPLGKRAIVFVKNDVWIATNNGLISMKNIL---LQEEKTNLPLSWPIQEQWEQAIMVAPT 114
              +  +A V    D+ + +               Q  K    +   I+   +Q +     
Sbjct: 1142 EVVAIKAFVEAGGDLIVTSKADYKDQTGQFGNAAQGNKVLEAIGATIRFNDDQVVDPVEN 1201

Query: 115  GWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLF--- 171
            G        +   L     N        +         S   ++   S+   N  L    
Sbjct: 1202 G-------GQAYRLYFDDYNEESPYTKGIDFGKIEQGNSKNTDYK-FSFYSGNSVLVPAD 1253

Query: 172  FGDYEGTFWQGDISGSDNA 190
              + +      + + +D+A
Sbjct: 1254 ATNVDVVVKGHETTTNDDA 1272


>gi|81355156|ref|YP_392481.1| putative coat protein [Rosellinia necatrix partitivirus 1-W8]
 gi|63093873|dbj|BAD98238.1| putative coat protein [Rosellinia necatrix partitivirus 1-W8]
          Length = 686

 Score = 38.2 bits (87), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/246 (9%), Positives = 68/246 (27%), Gaps = 35/246 (14%)

Query: 42  PDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPI 101
           P+  ++  L +      P+    +     D  +        +       ++       P 
Sbjct: 402 PNTGTTHHLASAVCDTDPVHPVTVTQPSADFVLL-----RDVTRTFPIADQHL----IPR 452

Query: 102 QEQWEQAIMVAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQ 161
             ++           ++++ +           NS +S              ++       
Sbjct: 453 DTEFLLYDEDRDFAPTVLVLD--------PTTNSTVSAYM-----------ATLTGMVIY 493

Query: 162 SYVVANENLFFGDYEGTFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSL 221
           S+ +    + F + E      +   +D+A P+  +Y    + +         A +A   +
Sbjct: 494 SHEIDASAISFPNTEDINGLHNCQFADSATPYTMVYRPSHYTLGT------TAHIARKRI 547

Query: 222 QAYQRPYLKLFARANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKW-TDNLFVTKKKL 280
           +     +       ++   Y      T  +  + +G    +  D V +         +++
Sbjct: 548 RVKDNRFKSALYLVDFAKIYIPRPILTTIDTLVSHGFPGFTFRDNVTFIGATTSALAQRV 607

Query: 281 FQFCQN 286
                N
Sbjct: 608 VSTRSN 613


>gi|83942489|ref|ZP_00954950.1| C4-dicarboxylate transport sensor protein DctB, putative
           [Sulfitobacter sp. EE-36]
 gi|83846582|gb|EAP84458.1| C4-dicarboxylate transport sensor protein DctB, putative
           [Sulfitobacter sp. EE-36]
          Length = 586

 Score = 37.8 bits (86), Expect = 2.3,   Method: Composition-based stats.
 Identities = 6/112 (5%), Positives = 24/112 (21%), Gaps = 10/112 (8%)

Query: 65  IVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMILWEKR 124
           +  +     +  +    ++                  +  +  A+    T +S+I  +  
Sbjct: 103 VEEIGAASLMLYDIDGRTVAATDRN---RLGASHRQ-EAYFVDALRSNSTVFSVIPRDTG 158

Query: 125 NMLLISCPKNSLLSDKTFVMN-----VAHNNRWSSFHNWFTQSYVVANENLF 171
                   +         V+            W+   +          + + 
Sbjct: 159 GYRFFYSRRIQEGGTNLGVIAAEVDLQRFERAWAGISD-AVIVTDSTGDIIM 209


>gi|186896503|ref|YP_001873615.1| N-acetylglucosamine-6-phosphate deacetylase [Yersinia
           pseudotuberculosis PB1/+]
 gi|186699529|gb|ACC90158.1| N-acetylglucosamine-6-phosphate deacetylase [Yersinia
           pseudotuberculosis PB1/+]
          Length = 388

 Score = 37.8 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 3/98 (3%)

Query: 20  GLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNG 79
           G+ T    +   GE+     + P D+    L     I   +          DV  A+   
Sbjct: 15  GIETGVAVIVEQGEIVAVTRELPADAEIVHLTGKTLIPGLIDIHIHGRQGADVMDASAEA 74

Query: 80  LISMKNILLQEEKTN---LPLSWPIQEQWEQAIMVAPT 114
           L ++   L Q          +S PIQ+ +     V   
Sbjct: 75  LRTIARALPQTGVVAWVGTTVSAPIQDIFAALAQVRDF 112


>gi|153947379|ref|YP_001399920.1| N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pseudotuberculosis IP 31758]
 gi|152958874|gb|ABS46335.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pseudotuberculosis IP 31758]
          Length = 388

 Score = 37.8 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 3/98 (3%)

Query: 20  GLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNG 79
           G+ T    +   GE+     + P D+    L     I   +          DV  A+   
Sbjct: 15  GIETGVAVIVEQGEIVAVTRELPADAEIVHLTGKTLIPGLIDIHIHGRQGADVMDASAEA 74

Query: 80  LISMKNILLQEEKTN---LPLSWPIQEQWEQAIMVAPT 114
           L ++   L Q          +S PIQ+ +     V   
Sbjct: 75  LRTIARALPQTGVVAWVGTTVSAPIQDIFAALAQVRDF 112


>gi|22127099|ref|NP_670522.1| deacetylase [Yersinia pestis KIM 10]
 gi|45443271|ref|NP_994810.1| 2-deoxy-D-gluconate 3-dehydrogenase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51597396|ref|YP_071587.1| acetylglucosamine-6-phosphate deacetylase [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806429|ref|YP_650345.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           Antiqua]
 gi|108813200|ref|YP_648967.1| acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           Nepal516]
 gi|145597979|ref|YP_001162055.1| acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           Pestoides F]
 gi|150260148|ref|ZP_01916876.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           CA88-4125]
 gi|162420948|ref|YP_001607713.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis Angola]
 gi|165924986|ref|ZP_02220818.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Orientalis str. F1991016]
 gi|165937229|ref|ZP_02225793.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Orientalis str. IP275]
 gi|166010394|ref|ZP_02231292.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Antiqua str. E1979001]
 gi|166212754|ref|ZP_02238789.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Antiqua str. B42003004]
 gi|167400119|ref|ZP_02305637.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Antiqua str. UG05-0454]
 gi|167419118|ref|ZP_02310871.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Orientalis str. MG05-1020]
 gi|167425364|ref|ZP_02317117.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Mediaevalis str. K1973002]
 gi|167468775|ref|ZP_02333479.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis FV-1]
 gi|170023237|ref|YP_001719742.1| N-acetylglucosamine-6-phosphate deacetylase [Yersinia
           pseudotuberculosis YPIII]
 gi|218928014|ref|YP_002345889.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           CO92]
 gi|229837513|ref|ZP_04457675.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           Pestoides A]
 gi|229840741|ref|ZP_04460900.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229842700|ref|ZP_04462855.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229903647|ref|ZP_04518760.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           Nepal516]
 gi|270487428|ref|ZP_06204502.1| N-acetylglucosamine-6-phosphate deacetylase [Yersinia pestis KIM
           D27]
 gi|294502985|ref|YP_003567047.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           Z176003]
 gi|21960155|gb|AAM86773.1|AE013923_8 putative deacetylase [Yersinia pestis KIM 10]
 gi|45438139|gb|AAS63687.1| 2-deoxy-D-gluconate 3-dehydrogenase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51590678|emb|CAH22320.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776848|gb|ABG19367.1| N-acetylglucosamine 6-phosphate deacetylase [Yersinia pestis
           Nepal516]
 gi|108778342|gb|ABG12400.1| N-acetylglucosamine 6-phosphate deacetylase [Yersinia pestis
           Antiqua]
 gi|115346625|emb|CAL19508.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           CO92]
 gi|145209675|gb|ABP39082.1| N-acetylglucosamine 6-phosphate deacetylase [Yersinia pestis
           Pestoides F]
 gi|149289556|gb|EDM39633.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           CA88-4125]
 gi|162353763|gb|ABX87711.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis Angola]
 gi|165914703|gb|EDR33316.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Orientalis str. IP275]
 gi|165923186|gb|EDR40337.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Orientalis str. F1991016]
 gi|165990880|gb|EDR43181.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Antiqua str. E1979001]
 gi|166206046|gb|EDR50526.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Antiqua str. B42003004]
 gi|166963112|gb|EDR59133.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Orientalis str. MG05-1020]
 gi|167050827|gb|EDR62235.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Antiqua str. UG05-0454]
 gi|167055764|gb|EDR65548.1| putative N-acetylgalactosamine-6-phosphate deacetylase [Yersinia
           pestis biovar Mediaevalis str. K1973002]
 gi|169749771|gb|ACA67289.1| N-acetylglucosamine-6-phosphate deacetylase [Yersinia
           pseudotuberculosis YPIII]
 gi|229679417|gb|EEO75520.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           Nepal516]
 gi|229691010|gb|EEO83064.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229697107|gb|EEO87154.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229704201|gb|EEO91212.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           Pestoides A]
 gi|262361020|gb|ACY57741.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           D106004]
 gi|262364961|gb|ACY61518.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           D182038]
 gi|270335932|gb|EFA46709.1| N-acetylglucosamine-6-phosphate deacetylase [Yersinia pestis KIM
           D27]
 gi|294353444|gb|ADE63785.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           Z176003]
 gi|320014090|gb|ADV97661.1| putative acetylglucosamine-6-phosphate deacetylase [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 388

 Score = 37.8 bits (86), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 3/98 (3%)

Query: 20  GLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNG 79
           G+ T    +   GE+     + P D+    L     I   +          DV  A+   
Sbjct: 15  GIETGVAVIVEQGEIVAVTRELPADAEIVHLTGKTLIPGLIDIHIHGRQGADVMDASAEA 74

Query: 80  LISMKNILLQEEKTN---LPLSWPIQEQWEQAIMVAPT 114
           L ++   L Q          +S PIQ+ +     V   
Sbjct: 75  LRTIARALPQTGVVAWVGTTVSAPIQDIFAALAQVRDF 112


>gi|109899509|ref|YP_662764.1| protein of unknown function DUF940, membrane lipoprotein putative
           [Pseudoalteromonas atlantica T6c]
 gi|109701790|gb|ABG41710.1| protein of unknown function DUF940, membrane lipoprotein putative
           [Pseudoalteromonas atlantica T6c]
          Length = 709

 Score = 37.4 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/285 (9%), Positives = 72/285 (25%), Gaps = 19/285 (6%)

Query: 44  DSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNGLISMKN--ILLQEEKTNLPLSWPI 101
             S+F+ K        +    I    N        G I +        +      +   +
Sbjct: 424 SVSNFNPKNTSGFFTGIETFWIQTFGNPEEFYLYQGGIMVNGGYSFDGKTSVVGTIKANL 483

Query: 102 QEQWEQAIMVAPTGWSMILWEKRNML-LISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFT 160
            + +++         S +   + N+   +S    SL +      N   +N ++ F     
Sbjct: 484 LQNFDKFNFTRDRAPSSLPRVRTNVREYVSGRDISLENLYLHWNNRIADNLYAQF----- 538

Query: 161 QSYVVANENLFFGDYEGTFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLS 220
             Y    E ++ G      ++   S          +    +        ++     A++ 
Sbjct: 539 --YGGYLETMYGGVGGELLYRPVDSNLAFGFDINYVQQRSWENDIDFYDYKVLTGHANVF 596

Query: 221 LQAYQRPYLKLFAR---ANYDHSYPEFSKETISNNPMDNGIW------DNSLWDEVKWTD 271
            Q    P   L  +                   ++ +  G +       +  + E  +T 
Sbjct: 597 WQPEFLPDTLLTIKVGQYLAKDKGVTIDFAKRFDSGIVVGAYAAITDVSSEEYGEGSFTK 656

Query: 272 NLFVTKKKLFQFCQNVVAYGNCLAVGCVIVSSGKSINDIQINNAK 316
             +++        +     G    +             I++    
Sbjct: 657 GFYLSIPFDLFSLKPAKGSGKIPWIPISRDGGQALNRPIELFGVT 701


>gi|257413074|ref|ZP_04741901.2| putative bacterial extracellular solute-binding protein [Roseburia
           intestinalis L1-82]
 gi|257204740|gb|EEV03025.1| putative bacterial extracellular solute-binding protein [Roseburia
           intestinalis L1-82]
          Length = 976

 Score = 37.4 bits (85), Expect = 2.7,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 81/262 (30%), Gaps = 28/262 (10%)

Query: 34  VAVYGGDNPDDSSSFSLKAIY-HIGRPLGKRA--IVFVKNDVWIATNN--GLISMKNILL 88
           + VY G +PDD   ++L  +Y  +   +   +  +  + +DV   T      I++   L 
Sbjct: 420 ILVYTGADPDDYRDYNLDQVYPEVIEAMDLESKRLYKIIDDVVAYTGQKAEKIAVAQTLA 479

Query: 89  QEEKTNLPLSWPIQEQWEQAIMVAPTGWSMILWEKRN-----MLLISCPKNSLLSDKTFV 143
           Q+ +  +     I  ++        +  + IL           +++S   + +  D    
Sbjct: 480 QQLERFVERPDKITVEFTTFKENITSLGTAILNMSETKLDIDYIVVSSKGSEVPED---- 535

Query: 144 MNVAHNNRWSSFHNWFTQSYVVAN--ENLFFGDYEGTFWQGDISGSDNARPFIGIYLSPF 201
                   W    ++     V  +   +++  D         ++G D       +     
Sbjct: 536 RASGWAKAWHEIKSFAASFVVDYDAVGDVYDEDDNEVVRVWIVTGRDQGTILKTMV---D 592

Query: 202 HAIDPRLGFQRRACVAHLS-----LQAYQRPYLKLFARAN----YDHSYPEFSKETISNN 252
               P  G +    +   S     + A Q P + L   A+    Y             + 
Sbjct: 593 DTFTPETGIKVNVEIVDASALLNAVVAGQGPDVVLSVGADQPVNYALRNAAEDLTQFEDY 652

Query: 253 PMDNGIWDNSLWDEVKWTDNLF 274
                ++  S +   ++   L+
Sbjct: 653 EDVLKVFYESAYRAYEYDGGLY 674


>gi|325924710|ref|ZP_08186148.1| Tfp pilus assembly protein, tip-associated adhesin PilY1
           [Xanthomonas perforans 91-118]
 gi|325544916|gb|EGD16261.1| Tfp pilus assembly protein, tip-associated adhesin PilY1
           [Xanthomonas perforans 91-118]
          Length = 1055

 Score = 37.0 bits (84), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 59/211 (27%), Gaps = 12/211 (5%)

Query: 95  LPLSWPIQEQWEQAIMVAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSS 154
             L    +  +   +         +LW+K +        +   +    ++    +  W +
Sbjct: 691 GTLGRGGRGAFALDVTDPGNIS--LLWDKTS----GEISSMGNNLGKPIIGQLASGAWFT 744

Query: 155 FHNWFTQSYVVANENLFFGDYEGTFWQGDISGSD-NARPFIGIYLSPFHAIDPR--LGFQ 211
                  S       +  G   GT  +     +  N    +  + S  ++I  R   G  
Sbjct: 745 MIGNGPNSSNDGAGLVLIGVLTGTVTEIATGATGANGLSGVLGWSSTNNSIVDRIYAGDL 804

Query: 212 RRACVAHLSLQAYQRPYLKLFARANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTD 271
           +        +           A      + P  +  T + +P     W    +   K+  
Sbjct: 805 KGNMWRFAMVGTVATVTKLFTATYG-GQTQPITAAPTAAKDPATGLTW--LFFGTGKYIS 861

Query: 272 NLFVTKKKLFQFCQNVVAYGNCLAVGCVIVS 302
           +  ++ K +  +   V   G  +A    + S
Sbjct: 862 DGDLSNKDVQSWYGLVDRSGAAIANRSTLNS 892


>gi|146301154|ref|YP_001195745.1| hypothetical protein Fjoh_3412 [Flavobacterium johnsoniae UW101]
 gi|146155572|gb|ABQ06426.1| hypothetical protein Fjoh_3412 [Flavobacterium johnsoniae UW101]
          Length = 394

 Score = 37.0 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 8/72 (11%), Positives = 15/72 (20%), Gaps = 1/72 (1%)

Query: 201 FHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDHSYPEFSKETISNNPMDNGIWD 260
           F  I       +     +L++       +       Y             NN      + 
Sbjct: 87  FDYIKDPELGVKAFIKNYLNVSQGGAVAIDY-PYYYYSTVNTGQPSPYDLNNDGKLNNFG 145

Query: 261 NSLWDEVKWTDN 272
           N  W    +   
Sbjct: 146 NDAWGFGMYPGQ 157


>gi|281207113|gb|EFA81296.1| hypothetical protein PPL_05275 [Polysphondylium pallidum PN500]
          Length = 1590

 Score = 37.0 bits (84), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/147 (7%), Positives = 32/147 (21%), Gaps = 17/147 (11%)

Query: 124 RNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWF--------TQSYVVANENLFFGDY 175
              + I    +++    +F   V    +W                 +     + + +   
Sbjct: 349 TYFIFIYSDNSNVTITTSFGYGVF--FQWYETEGIKCPAGSNRNPFTNDAPFDTIHYWGT 406

Query: 176 EGTFWQGDISGSDNARPFIGIYLSPF----HAIDPRLGFQRRACVAHLSLQAYQRPYLKL 231
            G  +      S             F            +        L+ ++      KL
Sbjct: 407 SGIPYFSYQITSFANTNVTRSLNLGFQNQTFDFTDNNNYSSPNMTIKLTTKSNSEFTNKL 466

Query: 232 FARANYDHSYPEFSKETISNNPMDNGI 258
               + +      + +  ++      I
Sbjct: 467 ---IDLNGITILQTSDPSTDITSALFI 490


>gi|156093264|ref|XP_001612672.1| variable surface protein Vir [Plasmodium vivax SaI-1]
 gi|148801498|gb|EDL42898.1| variable surface protein Vir, putative [Plasmodium vivax]
          Length = 396

 Score = 37.0 bits (84), Expect = 4.1,   Method: Composition-based stats.
 Identities = 5/54 (9%), Positives = 13/54 (24%)

Query: 236 NYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVA 289
           +Y +   +F + T   +      +  S +    +           F        
Sbjct: 313 DYANRRRDFDESTYGASTYGASTYGASTYGTSTFDGTSTFDGTSTFDGTSTFDG 366


>gi|134295287|ref|YP_001119022.1| hypothetical protein Bcep1808_1176 [Burkholderia vietnamiensis G4]
 gi|134138444|gb|ABO54187.1| hypothetical protein Bcep1808_1176 [Burkholderia vietnamiensis G4]
          Length = 471

 Score = 37.0 bits (84), Expect = 4.2,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 66/256 (25%), Gaps = 13/256 (5%)

Query: 17  SGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIA- 75
            G G++   V+L       V+            L  ++         +I  +  +V+   
Sbjct: 183 VGVGVTKRYVYLLGEVTTEVWFNAGDSTFPYERLPGVFMQHGCAAAGSIAHMDGEVYWLA 242

Query: 76  -TNNGLISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWSMILWEKRNMLLISCPKN 134
            +  G+  +              +    E      +    G++  + E     +++ P  
Sbjct: 243 QSQQGVCYVNRSQKFNATQISTFALD-NEIASYPRVDDAIGFTYQI-EGHFFYVLTFPSA 300

Query: 135 SLLSDKTFVMNVAHNNRWSS----FHNWFTQSYVVANENLFFGD-YEGTFWQGDI-SGSD 188
                        +   W              Y         GD   G  +  D+ + +D
Sbjct: 301 DKTWQYDLSTEQWNELSWVDENGGLRRHRANCYASLYGQPIVGDWENGNLYLWDVNAYTD 360

Query: 189 NARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQ-AYQRPYLKLFARANYDHSYPEFSKE 247
           N  P      S F         + R      +++         ++    +  +  +    
Sbjct: 361 NGNPIP-RIRS-FMHSVDDNSDRMRYREFIANMEVGNGSNNSPVWVFLRWSDTRGKSWGN 418

Query: 248 TISNNPMDNGIWDNSL 263
            I  +    G +  SL
Sbjct: 419 AIKTSLGKEGEYATSL 434


>gi|330799381|ref|XP_003287724.1| hypothetical protein DICPUDRAFT_151857 [Dictyostelium purpureum]
 gi|325082285|gb|EGC35772.1| hypothetical protein DICPUDRAFT_151857 [Dictyostelium purpureum]
          Length = 1225

 Score = 36.6 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 35/109 (32%), Gaps = 11/109 (10%)

Query: 13  WSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDV 72
           W  ++G G       +   G   ++   +  D+S+        +G  + KR    +  D+
Sbjct: 595 WVIDNGIG-------IPEEGREKLFQTFSQYDASTTRKYGGSGLGLAISKRLTQLLGGDI 647

Query: 73  WIATNNG----LISMKNILLQEEKTNLPLSWPIQEQWEQAIMVAPTGWS 117
           W  +  G       +  +   + +T    S   Q      +    +  S
Sbjct: 648 WFESQKGKGSSFHFLVEVFFPDYQTIQQSSLQPQFNITNQLTSNDSSTS 696


>gi|315427984|dbj|BAJ49573.1| N-methylhydantoinase B [Candidatus Caldiarchaeum subterraneum]
          Length = 566

 Score = 36.6 bits (83), Expect = 4.4,   Method: Composition-based stats.
 Identities = 6/76 (7%), Positives = 18/76 (23%), Gaps = 3/76 (3%)

Query: 134 NSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEG---TFWQGDISGSDNA 190
           + +  D   +    +   WS        S+   +  ++    +      +       D  
Sbjct: 109 SPVFYDSQLIAFSVNKGHWSEVGGMRFGSWTTDSTEIYQEGLQFPLLKLYNAGEPNRDLF 168

Query: 191 RPFIGIYLSPFHAIDP 206
                   +P   +  
Sbjct: 169 DLIRTNVRTPDMTLGD 184


>gi|294633768|ref|ZP_06712326.1| polysaccharide lyase family 8 [Streptomyces sp. e14]
 gi|292830410|gb|EFF88761.1| polysaccharide lyase family 8 [Streptomyces sp. e14]
          Length = 715

 Score = 36.6 bits (83), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/185 (8%), Positives = 39/185 (21%), Gaps = 12/185 (6%)

Query: 131 CPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTFWQGDISGSDNA 190
                  S             W++   +    +          +     W    + S + 
Sbjct: 503 TVDGVAQSSALGWNATFPRASWATIAGFGGYVFPGGASVKALREERTGSWHDINTLSGST 562

Query: 191 RPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKL--FARANYDHSYPEFSKET 248
            P    YL+ +            A V                        ++  +     
Sbjct: 563 TPLTRRYLTLWFDHGTDPAAGSYAYVLLPGADPATTAARAAAAGWLTVLANTVNQQGVSV 622

Query: 249 ISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNCLAVGCVIVSSGKSIN 308
            S        +      +V  T  + V  ++           G+   +     +  ++  
Sbjct: 623 PSLGLTAVNFYGGGTVGKVSATAGVSVMIRE----------SGSTATICVADPTRQRTTV 672

Query: 309 DIQIN 313
           D+  N
Sbjct: 673 DVTWN 677


>gi|148557351|ref|YP_001264933.1| hypothetical protein Swit_4457 [Sphingomonas wittichii RW1]
 gi|148502541|gb|ABQ70795.1| hypothetical protein Swit_4457 [Sphingomonas wittichii RW1]
          Length = 475

 Score = 36.6 bits (83), Expect = 5.5,   Method: Composition-based stats.
 Identities = 23/249 (9%), Positives = 62/249 (24%), Gaps = 32/249 (12%)

Query: 33  EVAVYGGDNPDDSSSFSLKAIYHIGRPLGKRAIVFVKNDVWIATNNGLISMKNILLQEEK 92
           E  +       D + +    I      +   ++       +  +N GL++   +      
Sbjct: 200 ENRIVRMSYTADDAVWQFDEIATDVGCIAPWSLATYGKLTFFLSNKGLMACDGV-----S 254

Query: 93  TNLPLSWPIQEQWEQAIM-VAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVMNVAHNNR 151
            +   S  +   +   +     +  S ++  + ++ ++S P  S  +             
Sbjct: 255 VSAIGSEKVDRTFLHMVDRSYLSAISAVVDPRNSLYMLSVPSASPANQVLLYNFALQRFT 314

Query: 152 WSSFHNWF-----TQSYVVANENLFFGDYEGTFWQGDISGS---------DNARPFIGIY 197
            +   +            + + +  +GD +      D +            +    +G  
Sbjct: 315 TAPITSQRMFPSLALGMTLEDMDAVYGDLDAVALSLDSALFRGGYPLVMLFDGNGMLGTL 374

Query: 198 LSPFH--AIDPR-----LGFQRRACVAHLSLQAYQRPYLKLFARANYDHSYPEFSKETIS 250
                   +         G + R         A       L       +S  +   ET  
Sbjct: 375 SGDNMAATLVDGMREWFPGRRARITGVRPFTDATTATVSILG-----QNSLGDMPTETAF 429

Query: 251 NNPMDNGIW 259
                 G +
Sbjct: 430 TARSGGGFY 438


>gi|330996831|ref|ZP_08320700.1| Fibrobacter succinogene major domain protein [Paraprevotella
           xylaniphila YIT 11841]
 gi|329572274|gb|EGG53933.1| Fibrobacter succinogene major domain protein [Paraprevotella
           xylaniphila YIT 11841]
          Length = 445

 Score = 36.3 bits (82), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/187 (9%), Positives = 52/187 (27%), Gaps = 26/187 (13%)

Query: 101 IQEQWEQAIMVAPTGWSMILWEKRNMLLISCPKNSLLSDKTFVMNV---AHNNRWSSFH- 156
           + E     +  +    S +L  K   + I   K+  ++    V N      +N +++   
Sbjct: 143 VDEAATYIVDDSELFVSAVLAPKTARMHIKGEKDKTVAVSGVVYNTSFSLTDNVFTTSTE 202

Query: 157 ---------NWFTQSYVVANENLFFGDYEGTFWQGDISGSDNARPFIGIYLSPFHAIDPR 207
                     +    Y   +E       +  +     + + +   F+    S +  +  +
Sbjct: 203 EISTQFESDGYTPYIYCSLDETHVITLDDLYYKY---TKTFDPTKFMAG-ESGYMVMPSQ 258

Query: 208 LGFQRRACVAHLSLQAYQRPYLKLFARANYDHSYPEFSKETISNNPMDNGIWDNSLWDEV 267
           +  +       +     +   L L  R             +   +      W ++ +   
Sbjct: 259 VENK---GWTSVYYYPEEAVDLGLSVRW-----ASMNVGASNQYDDGIYTSWGDA-YGTN 309

Query: 268 KWTDNLF 274
             T + +
Sbjct: 310 TSTSSSY 316


>gi|296414372|ref|XP_002836875.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295632717|emb|CAZ81066.1| unnamed protein product [Tuber melanosporum]
          Length = 1821

 Score = 36.3 bits (82), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/128 (9%), Positives = 31/128 (24%), Gaps = 19/128 (14%)

Query: 190 ARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPY--LKLFARANYDHSYPEFSKE 247
              + G    P++    +   QR A  A   +    +P          NY+      +  
Sbjct: 138 GSGYNGSQHQPYNPAAYQAQPQRHATSAGFGVSPEYQPQRHATTAGVGNYNSGQFSPTTA 197

Query: 248 TISNNPMDNGIWDNSLWDEV--------------KWTDN---LFVTKKKLFQFCQNVVAY 290
           T + +  +   +    +                  +           +  +    ++   
Sbjct: 198 TYNPSTFNTASYPTGTYRTGAVPQTAPLQSHPSQSFGGGPGYSQYATRPQYATTSSLYGS 257

Query: 291 GNCLAVGC 298
           G   + G 
Sbjct: 258 GQPYSPGL 265


>gi|220914641|ref|YP_002489950.1| hypothetical protein Achl_3909 [Arthrobacter chlorophenolicus A6]
 gi|219861519|gb|ACL41861.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6]
          Length = 1838

 Score = 35.9 bits (81), Expect = 8.0,   Method: Composition-based stats.
 Identities = 11/124 (8%), Positives = 27/124 (21%), Gaps = 1/124 (0%)

Query: 174 DYEGTFWQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFA 233
                 ++   S S   + +   Y     +  P    Q         +         +  
Sbjct: 787 GSPNGVYRYGASSSFPNQVYDAEYYWVDLSFTPSGAVQPAVSSVSP-INNAADVSTGIKP 845

Query: 234 RANYDHSYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTKKKLFQFCQNVVAYGNC 293
            A ++ +    S      +     +   + +D    T          +         G  
Sbjct: 846 SATFNQTVTATSVVFSVKSSAGANVAGTTTYDPATNTSTFTPAASLGYSTTYTATVSGAT 905

Query: 294 LAVG 297
            + G
Sbjct: 906 NSAG 909


>gi|195450617|ref|XP_002072561.1| GK13659 [Drosophila willistoni]
 gi|194168646|gb|EDW83547.1| GK13659 [Drosophila willistoni]
          Length = 3016

 Score = 35.9 bits (81), Expect = 8.3,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 88/321 (27%), Gaps = 38/321 (11%)

Query: 6    SLPAGFSWSTESGDGLSTLCVFLSTLGEVAVYGGDNPDDSSSFSL--KAIYHIGRPLGKR 63
            S+  G S   + G GL              V+ G +  + S   +        G  +  +
Sbjct: 1080 SVLGGLSKGIKGGLGLDG------------VFSGSSSTEMSQPQVNNSGKKVFGFGIASK 1127

Query: 64   AIVFVKNDVWIATNNGLISMKNILLQEEKTNLPLSWPI---QEQWEQAIMVAPTGWSMIL 120
             +  V     + ++N  +       +        +  I   +  +    ++  T  S   
Sbjct: 1128 FVPSVGG--LLNSSNKFVP-TEPEKETSAIVATTTSAISHEETAFSNVQLLVATTAST-- 1182

Query: 121  WEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTF- 179
             +     + S   N L  +    +      + S        +Y    ++L FG+   +  
Sbjct: 1183 NQTSTAHINSNNSNDLPINFVTEVCPITKTQIS-----KEVAYHDNYDDLQFGNDLTSVD 1237

Query: 180  --WQGD-ISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARAN 236
              ++ D     DN    I  Y  P+  ++  +  +  A    LS +              
Sbjct: 1238 NSYEYDYTGYCDNGE-IIYSYEDPYKEVENNINVEMNAQYISLSSKPMGEATSLQKPLGL 1296

Query: 237  YDHSYPEFSKETISNNPMDNGIWDNSLWDEVK---WTDNLFVTKKKLFQFCQNVVAYGNC 293
                 P    E    +   N     S         +   L      +    Q V    + 
Sbjct: 1297 RSSDLPPPPVEAPITSTSTNSASSGSGVSTATSGMFGSILGKAAAAVQSATQAVNQGASS 1356

Query: 294  LAVGC---VIVSSGKSINDIQ 311
            +A+      + SS + +    
Sbjct: 1357 VALAVAQKAVSSSDQKVTAQS 1377


>gi|294933954|ref|XP_002780918.1| hypothetical protein Pmar_PMAR025346 [Perkinsus marinus ATCC 50983]
 gi|239891065|gb|EER12713.1| hypothetical protein Pmar_PMAR025346 [Perkinsus marinus ATCC 50983]
          Length = 713

 Score = 35.9 bits (81), Expect = 8.6,   Method: Composition-based stats.
 Identities = 15/197 (7%), Positives = 40/197 (20%), Gaps = 25/197 (12%)

Query: 120 LWEKRNMLLISCPKNSLLSDKTFVMNVAHNNRWSSFHNWFTQSYVVANENLFFGDYEGTF 179
           +     + +++    +      F+                  S         +G  + T 
Sbjct: 363 IRPGGRIRIVAPSDGTEEGSFKFIRYTLEC-----VITLQQVSGDRGQLTTLWGSDDVTC 417

Query: 180 WQGDISGSDNARPFIGIYLSPFHAIDPRLGFQRRACVAHLSLQAYQRPYLKLFARANYDH 239
              + + +      I                  +   A +++    RP   + +   Y  
Sbjct: 418 IVEEDAKNVANVNIIST---------------TKVAQAPVNVAPSSRPVQSIRSGLLYRV 462

Query: 240 SYPEFSKETISNNPMDNGIWDNSLWDEVKWTDNLFVTK-KKLFQFCQNVVAYGNCLAVGC 298
                             IW    +D                        A G  + V  
Sbjct: 463 VAV---VYNPQQANQQAAIWGIETYDNTFTNVGGNPDVFNSEAALLDAGTATGFPITVDL 519

Query: 299 -VIVSSGKSINDIQINN 314
              + +        +++
Sbjct: 520 YRFLITKGDGPQEALDS 536


>gi|320583430|gb|EFW97643.1| calcium-transporting ATPase, putative [Pichia angusta DL-1]
          Length = 1166

 Score = 35.5 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 30  TLGEVAVYGGDNPDDSSSFSLKAI-YHIGRPLGKRAIVFVKNDVWIATNNGLISMKNILL 88
           + GEV    GD  +D+ +  L  + + +G  +    +    +D+ I T +   S+ N + 
Sbjct: 784 SQGEVVAVTGDGTNDAPALKLADVGFSMG--IAGTEVAREASDI-ILTTDDFSSIVNAIK 840

Query: 89  QEEKTNLPLSWPIQEQWEQAIMV 111
                   +   +Q Q    +  
Sbjct: 841 WGRTVATSIRKFVQFQLTVNVTA 863


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.305    0.128    0.307 

Lambda     K      H
   0.267   0.0396    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,811,272,983
Number of Sequences: 14124377
Number of extensions: 45918789
Number of successful extensions: 198276
Number of sequences better than 10.0: 206
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 171
Number of HSP's that attempted gapping in prelim test: 197761
Number of HSP's gapped (non-prelim): 563
length of query: 320
length of database: 4,842,793,630
effective HSP length: 139
effective length of query: 181
effective length of database: 2,879,505,227
effective search space: 521190446087
effective search space used: 521190446087
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 81 (35.9 bits)