RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254781135|ref|YP_003065548.1| hypothetical protein
CLIBASIA_05185 [Candidatus Liberibacter asiaticus str. psy62]
         (83 letters)



>gnl|CDD|168735 PRK06932, PRK06932, glycerate dehydrogenase; Provisional.
          Length = 314

 Score = 24.8 bits (54), Expect = 4.7
 Identities = 4/14 (28%), Positives = 10/14 (71%)

Query: 5  EWVTFQYTTPDKTF 18
          EW+ + +T+ ++T 
Sbjct: 26 EWIEYDHTSAEQTI 39


>gnl|CDD|185482 PTZ00150, PTZ00150, phosphoglucomutase-2-like protein; Provisional.
          Length = 584

 Score = 25.0 bits (55), Expect = 4.7
 Identities = 8/28 (28%), Positives = 11/28 (39%)

Query: 48  HNQNNPVYFSYGWFFKNRQWYIASDSMD 75
                 +Y  YG+ F N  +YI  D   
Sbjct: 440 VEHLESLYKQYGYHFTNNSYYICYDPSR 467


>gnl|CDD|178548 PLN02964, PLN02964, phosphatidylserine decarboxylase.
          Length = 644

 Score = 24.4 bits (53), Expect = 6.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 57  SYGWFFKNRQW 67
           SYGW FK  +W
Sbjct: 297 SYGWMFKLSEW 307


>gnl|CDD|178836 PRK00066, ldh, L-lactate dehydrogenase; Reviewed.
          Length = 315

 Score = 24.1 bits (53), Expect = 8.9
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)

Query: 30 IYNGN--NCKSSLLPIICAGHNQ 50
          IY G+  +CK + L +I AG  Q
Sbjct: 63 IYAGDYSDCKDADLVVITAGAPQ 85


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.321    0.135    0.461 

Gapped
Lambda     K      H
   0.267   0.0693    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 1,316,327
Number of extensions: 61810
Number of successful extensions: 99
Number of sequences better than 10.0: 1
Number of HSP's gapped: 99
Number of HSP's successfully gapped: 7
Length of query: 83
Length of database: 5,994,473
Length adjustment: 52
Effective length of query: 31
Effective length of database: 4,870,857
Effective search space: 150996567
Effective search space used: 150996567
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.1 bits)