BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781137|ref|YP_003065550.1| hypothetical protein
CLIBASIA_05195 [Candidatus Liberibacter asiaticus str. psy62]
         (195 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254781137|ref|YP_003065550.1| hypothetical protein CLIBASIA_05195 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040814|gb|ACT57610.1| hypothetical protein CLIBASIA_05195 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 195

 Score =  401 bits (1030), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
           MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID
Sbjct: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60

Query: 61  HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSIN 120
           HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSIN
Sbjct: 61  HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSIN 120

Query: 121 SPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLRE 180
           SPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLRE
Sbjct: 121 SPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLRE 180

Query: 181 FDLALIAEKILWLGG 195
           FDLALIAEKILWLGG
Sbjct: 181 FDLALIAEKILWLGG 195


>gi|315122529|ref|YP_004063018.1| hypothetical protein CKC_03905 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495931|gb|ADR52530.1| hypothetical protein CKC_03905 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 150

 Score =  221 bits (564), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 103/150 (68%), Positives = 125/150 (83%)

Query: 46  LKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHT 105
           +++DWP+LL+ + I+  PFHLPQD++RPL  GA++M D SLARPVI++VDW IVK+ S  
Sbjct: 1   MRIDWPELLRTVTINSLPFHLPQDFHRPLPSGAVIMPDHSLARPVIHSVDWEIVKKTSQD 60

Query: 106 PWYWIDGRMIHLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWR 165
           PWYWID R++HLS + PATFRYFSKNW+I S +  K  ITADDDST+ P YLLIKDIIWR
Sbjct: 61  PWYWIDNRILHLSPSPPATFRYFSKNWVIGSQQNPKQIITADDDSTIFPRYLLIKDIIWR 120

Query: 166 WRRAQGLSFDDCLREFDLALIAEKILWLGG 195
           WRRAQGLSFDD LREFD A+IAEKIL+LGG
Sbjct: 121 WRRAQGLSFDDYLREFDSAVIAEKILFLGG 150


>gi|227822438|ref|YP_002826410.1| hypothetical protein NGR_c18930 [Sinorhizobium fredii NGR234]
 gi|227341439|gb|ACP25657.1| hypothetical protein NGR_c18930 [Sinorhizobium fredii NGR234]
          Length = 200

 Score =  140 bits (353), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 4/192 (2%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
           M +L ++N V D+V L RF++VY   D +   +V+  ++AG EI  + DW ++L+   + 
Sbjct: 1   MTLLTLINDVADIVSLDRFDSVYGTTDPNAQTMVALAEEAGAEIARRADWKRMLKTHAVS 60

Query: 61  HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRI-SHTPWYWIDGRMIHLS- 118
             P  LP DY R + GGA+   D    RP+ N   W ++  + S  P+  + GR + +S 
Sbjct: 61  ASPEILPADYQRLVPGGAVRAADGRFFRPITNGAQWAVIVGVASAEPYCHLSGREMLVSP 120

Query: 119 --INSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDD 176
              ++ AT  Y S+NW++    E +    ADDD+TL P  LL K +IWRW+R +GL+F+D
Sbjct: 121 AASSAGATIDYLSRNWVLGDPYEERDTFRADDDTTLFPERLLKKGLIWRWKRQKGLAFED 180

Query: 177 CLREFDLALIAE 188
            L EF+  L+ E
Sbjct: 181 NLAEFEADLLQE 192


>gi|150397023|ref|YP_001327490.1| hypothetical protein Smed_1820 [Sinorhizobium medicae WSM419]
 gi|150028538|gb|ABR60655.1| hypothetical protein Smed_1820 [Sinorhizobium medicae WSM419]
          Length = 200

 Score =  137 bits (346), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 110/192 (57%), Gaps = 4/192 (2%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
           M +L  +N VCD+V LS F+ VY + + + + +V+  Q+AG+EI  + DW + L++ ++ 
Sbjct: 1   MTLLTAINQVCDVVSLSPFDNVYGSAEPNAMTMVALAQEAGDEIARRADWQKTLRQHRVA 60

Query: 61  HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRI-SHTPWYWIDGRMIHLSI 119
               +LP D+ R   GG++   + +  RPV N   W ++  + S  P+++I    +  S 
Sbjct: 61  VASENLPDDFQRLTPGGSVRTAEKAFVRPVTNGGQWAVIAGMPSMQPYFFIRAGQVQFSP 120

Query: 120 NSP---ATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDD 176
            S    A   Y SKNW++      +   TADDD+TL P  LL+K I+WRW+R +GL+++D
Sbjct: 121 ASAAQGAVIDYVSKNWVLHDPDGPQATFTADDDTTLFPERLLLKGIVWRWKRQKGLAYED 180

Query: 177 CLREFDLALIAE 188
            L EF+  L  E
Sbjct: 181 NLAEFEADLAQE 192


>gi|315122530|ref|YP_004063019.1| hypothetical protein CKC_03910 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|313495932|gb|ADR52531.1| hypothetical protein CKC_03910 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
          Length = 37

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/37 (70%), Positives = 33/37 (89%)

Query: 1  MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFL 37
          M+VL +LNT+CDLVGLSRFE +Y+NQDE+ VLL+S L
Sbjct: 1  MSVLTLLNTICDLVGLSRFEKIYENQDENAVLLISLL 37


>gi|110632594|ref|YP_672802.1| hypothetical protein Meso_0233 [Mesorhizobium sp. BNC1]
 gi|110283578|gb|ABG61637.1| conserved hypothetical protein [Chelativorans sp. BNC1]
          Length = 234

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 24/207 (11%)

Query: 1   MNVL-AILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQ--EI 57
           M +L A  + + +LVG  R   V  + DE  V + +  ++A  EI    DW +L +  EI
Sbjct: 1   MTILSAAQDAIAELVG-RRPAAVVSSTDEICVEITALAKKAAVEIAKACDWQELTEFYEI 59

Query: 58  KID----HWPFHLPQDYYRPLLGGAMVMLDLS----LARPVINAVDWGI--VKRISH-TP 106
             D     +PF  P DY R  +  A  + D +        V N  +W +  +++I+  TP
Sbjct: 60  TADGEASAYPF--PSDYDR--MVQASEIFDPNNWCWGYHHVPNYSEWILYEIRKIAMLTP 115

Query: 107 WYW-IDGRMIHL----SINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKD 161
             W I     H     +    A F Y SKN  +  N+  K  IT+D DS +L   LL   
Sbjct: 116 GIWTIRKNQFHFMPTPAAGQKAIFPYISKNIFLSQNEAPKDTITSDSDSFVLDERLLTLS 175

Query: 162 IIWRWRRAQGLSFDDCLREFDLALIAE 188
           +IW+++  +GL +   + ++++AL  E
Sbjct: 176 LIWKYKAMKGLDYQQEVDDYNIALSQE 202


>gi|117925016|ref|YP_865633.1| hypothetical protein Mmc1_1719 [Magnetococcus sp. MC-1]
 gi|117608772|gb|ABK44227.1| conserved hypothetical protein [Magnetococcus sp. MC-1]
          Length = 233

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 14/189 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
           M++L+++    DL+G+ R   V  + D +   L++  Q  G  +  +  WP++ +E    
Sbjct: 1   MSLLSMVQQAADLIGVQRPTQVVSSSDPTIRQLLAVAQMEGRTLAARGPWPEMTREASFT 60

Query: 61  HWPFHLPQDYYR--PLLGGAM--VMLDLSLARPV---INAVDWGIVK-RISHTPWYWIDG 112
                   D     P +   +   M + +  R V   ++A+DW   +   S TP+     
Sbjct: 61  TVAGQANYDLQSLVPDMDFLINNTMWNRTTGRVVGGPMSAMDWQANRAHGSATPFPTFRI 120

Query: 113 R-MIHLSINSPA-----TFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
           R  + +   +PA     +F Y SKNW   S  + +    AD D  +L  +L+   ++WR+
Sbjct: 121 REGVLMFAPTPAQSESYSFEYHSKNWCKSSAGDGQQGWQADSDVGILSEHLMTLGLVWRF 180

Query: 167 RRAQGLSFD 175
           ++A+G  + 
Sbjct: 181 KKAKGFDYS 189


>gi|218509117|ref|ZP_03506995.1| hypothetical protein RetlB5_17140 [Rhizobium etli Brasil 5]
          Length = 232

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 17/199 (8%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQL-----LQ 55
           M++L I+  VC  + L     V  + D     L+    +AG ++    DW  L       
Sbjct: 1   MSLLTIIQNVCAEIDLDPPAAVMSSADPQVRQLLILTTRAGRDLLKDHDWSVLTTVRDFT 60

Query: 56  EIKIDHWPFHLPQDYYRPLLGGAM---VMLDLSLARPVINAVDWGIVKRISHTP----WY 108
              +   P   P D+ R  +  +M   V    SL  PV     W  +  ++  P    W 
Sbjct: 61  ATGVIPEPAEPPSDFKR-FVENSMIWNVSRLWSLNGPV-EPQAWDRLTILNSNPVPQVWR 118

Query: 109 WIDGRMIHLSINSPATFRY--FSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWR 165
            + G++     +   T RY   S NWI I+           D D+   P  LL   +IWR
Sbjct: 119 MLGGKLAFFPNDVGETLRYEYVSSNWIAINGGTTYAADWANDTDTARFPEDLLELSLIWR 178

Query: 166 WRRAQGLSFDDCLREFDLA 184
           W+RA+GL + + L  ++ A
Sbjct: 179 WKRAKGLDYGEELENYERA 197


>gi|327191476|gb|EGE58496.1| hypothetical protein RHECNPAF_300006 [Rhizobium etli CNPAF512]
          Length = 234

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 15/196 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLL-----Q 55
           M++L I+  VC  + L     V  + D   + L     +AG ++    DW  L+     Q
Sbjct: 1   MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLMRAHDWSALMVRRQFQ 60

Query: 56  EIKIDHWPFHLPQDYYRPLLGGAM--VMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
               +  P   P D+ R      +  V    SL  PV     W     ++  P    W  
Sbjct: 61  ATGANPEPDEPPGDWDRFAANARIWNVSRLWSLNGPV-EPQSWQRQTILAANPVPQIWRM 119

Query: 110 IDGRM-IHLSINSPA-TFRYFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
             GR+ I+ S+      + Y S  W+ ++    A  +   D D+   P  LL   +IWRW
Sbjct: 120 AGGRLDIYPSVAGETMEYAYISGFWVAVNGGATAAGNWANDTDTARFPEELLELSLIWRW 179

Query: 167 RRAQGLSFDDCLREFD 182
           +RA+GL + + L  F+
Sbjct: 180 KRAKGLDYGEELVSFE 195


>gi|13470678|ref|NP_102247.1| hypothetical protein mll0453 [Mesorhizobium loti MAFF303099]
 gi|14021420|dbj|BAB48033.1| mll0453 [Mesorhizobium loti MAFF303099]
          Length = 233

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 16/200 (8%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKV-DWPQL--LQEI 57
           M +L+++  VC ++GL+    V+   D   V L +   +  + I     DW +   L  +
Sbjct: 1   MTILSVIQQVCPVIGLNVPTAVFSATDRELVELQALSNEMAQRIAFDTRDWTKFKTLCTL 60

Query: 58  KIDHWP--FHLPQDYYRPLLGGAMVMLDLSLARPVINAVD----WGIVKRISHT---PWY 108
             D     F+ P DY R +L  A V    S   P  +  D     GI  +   +    W 
Sbjct: 61  TGDGSTVGFNFPSDYKR-MLKKARVWPSASPFAPYTHYSDTDQWLGITVQNFRSIIGAWT 119

Query: 109 WIDGRMI---HLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWR 165
            I  +++    ++  S A F Y +   I D +   K   TADDD   L   +L   +IW+
Sbjct: 120 MIGEQILIKPAMANLSTAQFYYITNQIIKDKDGAPKVAFTADDDVFRLDERVLKLGMIWQ 179

Query: 166 WRRAQGLSFDDCLREFDLAL 185
           W+  +G ++ + +  ++ AL
Sbjct: 180 WKANKGQAYAEDMTNYEDAL 199


>gi|152983270|ref|YP_001353889.1| hypothetical protein mma_2199 [Janthinobacterium sp. Marseille]
 gi|151283347|gb|ABR91757.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 233

 Score = 47.8 bits (112), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 26/202 (12%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
           M+ LAI+ TVC  +G+        + D   + L++  ++ G++   + +W  L  E    
Sbjct: 1   MSCLAIIKTVCRRIGILAPNAAVGSTDPQIIQLLAISEEEGQDQADRYNWQSLQTEAIFT 60

Query: 61  HWPFHL--PQDYYRPLLGGAM--VMLDLSLARPVI---NAVDWGIVKRISHTPWYWIDG- 112
                +  P     P     +   + + +L RPV    +  DW  V        + I+G 
Sbjct: 61  TVATQVQGPLSTIAPNCDYIVNNTIWNRTLRRPVYGPKSEQDWQQVVA------FQINGP 114

Query: 113 ----RMIHLSIN--------SPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIK 160
               R+I+  IN            F Y S+NW+  S        T D D+  +   L+I 
Sbjct: 115 FNAYRIINDQINFYPDPVAGQTCAFEYISRNWVNTSVAATSSVWTNDADTPKISDQLMIL 174

Query: 161 DIIWRWRRAQGLSFDDCLREFD 182
             +WRW++A+GL + +   +++
Sbjct: 175 GTVWRWKQAKGLDYAEDFAKYE 196


>gi|254720057|ref|ZP_05181868.1| hypothetical protein Bru83_11051 [Brucella sp. 83/13]
 gi|265985064|ref|ZP_06097799.1| predicted protein [Brucella sp. 83/13]
 gi|306839391|ref|ZP_07472205.1| Hypothetical protein BROD_2247 [Brucella sp. NF 2653]
 gi|264663656|gb|EEZ33917.1| predicted protein [Brucella sp. 83/13]
 gi|306405514|gb|EFM61779.1| Hypothetical protein BROD_2247 [Brucella sp. NF 2653]
          Length = 239

 Score = 46.2 bits (108), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 19/174 (10%)

Query: 27  DESTVLLVSFLQQAGEEICLKVDWPQL----LQEIKIDHWPFHLPQDYYRPLLGGAMVML 82
           D S + +  +L    EE+  ++DWP      L  I      ++LP D+ R       V  
Sbjct: 28  DLSYMDMKDYLSDTVEELLQRLDWPNPVTIDLPVIGTGAEDYNLPPDFLRVTRDELAVYE 87

Query: 83  DLSLAR---PVINAVDWGIVKRISHTP---WYWIDGR--------MIHLSINSPATFRYF 128
             +  R   P+ +   W  +K++       +Y I G            L  N      Y 
Sbjct: 88  PTTTRRACIPITSNGAWSHLKQLGSAGGNRYYRIQGSDGAYKIGFYRPLETNQRVIVSYV 147

Query: 129 SKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLREFD 182
           SKNW + +    K     ++   L P  L+   ++WR+RRA+G+ + D L E++
Sbjct: 148 SKNWNVAAGA-YKSEWVVEEAECLFPADLVRLGVVWRFRRAKGMPYADRLNEYE 200


>gi|319783506|ref|YP_004142982.1| hypothetical protein Mesci_3815 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169394|gb|ADV12932.1| hypothetical protein Mesci_3815 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 234

 Score = 43.9 bits (102), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 78/197 (39%), Gaps = 18/197 (9%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLL------ 54
           M++L ++     ++G+     VY   +   V +         EI    DW +LL      
Sbjct: 1   MSILDVVKGAATVLGMDVPTLVYGATNREMVEMQELANVMASEIVDAYDWQKLLVLKTFT 60

Query: 55  -QEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGI---VKRISHTPWYWI 110
              I  D   F+LP DY R     ++       A   + + D  I   V  I+    YWI
Sbjct: 61  GDGIAAD---FNLPDDYERMQQTSSLWSSRWLWATNHLTSPDQWIELQVTPIATVNGYWI 117

Query: 111 D-GRMIH----LSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWR 165
             G   H    ++ +    F Y S   +  SN   K   T D D+  L   LL   II+R
Sbjct: 118 IFGDQFHQWPVMANSETVKFFYVSNQIVQASNSSLKPAFTEDADTFRLSERLLKLAIIYR 177

Query: 166 WRRAQGLSFDDCLREFD 182
           W++ +GL++     +F+
Sbjct: 178 WKQNKGLAYQQAQDDFE 194


>gi|218678663|ref|ZP_03526560.1| hypothetical protein RetlC8_07169 [Rhizobium etli CIAT 894]
          Length = 235

 Score = 43.1 bits (100), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 76/196 (38%), Gaps = 15/196 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLL-----Q 55
           M++L I+  VC  + L     V  + D   + L     +AG ++  + DW  LL      
Sbjct: 1   MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLMREHDWSALLVDRQFT 60

Query: 56  EIKIDHWPFHLPQDYYRPLLGGAMVMLDLSL--ARPVINAVDWGIVKRISHTP----WYW 109
              ++  P   P D+ R     A +     L      +    W     ++  P    W  
Sbjct: 61  ATGVNPEPAEPPADWDR-FAANAKIWNAARLWQLNGPVEPQTWQRQTILNANPVPQIWRM 119

Query: 110 IDGRMIHLSINSPATFR--YFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
             G++      +  T R  Y S  W+ ++       +   D D+   P  LL   +IWRW
Sbjct: 120 AGGKLDIYPNAAGETIRYEYISGFWVAVNGGSSFAGNWANDTDTARFPEDLLELSLIWRW 179

Query: 167 RRAQGLSFDDCLREFD 182
           +RA+GL + + +  F+
Sbjct: 180 KRAKGLDYGEEIASFE 195


>gi|209548340|ref|YP_002280257.1| hypothetical protein Rleg2_0735 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534096|gb|ACI54031.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 235

 Score = 42.7 bits (99), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 19/198 (9%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKI- 59
           M++L I+  VC  + L     V  + D   + L     +AG ++  + DW  L+   +  
Sbjct: 1   MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLVREHDWSALMVRRQFV 60

Query: 60  ----DHWPFHLPQDYYRPLLGGAMVMLDLS----LARPVINAVDWGIVKRISHTP----W 107
               +  P   P D+ R        + + S    L  PV     W     ++  P    W
Sbjct: 61  ATGANPEPAEPPDDWNR--FAANAKIWNASRLWQLNGPV-EPQTWQRQTILNSNPVPQIW 117

Query: 108 YWIDGRM-IHLSINSPA-TFRYFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIW 164
               G++ I+ +++     + Y S  W+ ++       +   D D+   P  LL   +IW
Sbjct: 118 RMAGGKLDIYPNVSGETMEYAYISGFWVAVNGGATTAANWANDTDTARFPEDLLELSLIW 177

Query: 165 RWRRAQGLSFDDCLREFD 182
           RW+RA+GL + + +  F+
Sbjct: 178 RWKRAKGLDYGEEIASFE 195


>gi|116253671|ref|YP_769509.1| hypothetical protein RL3931 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258319|emb|CAK09421.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 232

 Score = 42.0 bits (97), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 77/200 (38%), Gaps = 19/200 (9%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
           M++L I+  VC  + L     V  + D     L     +AG ++    DW  L+      
Sbjct: 1   MSILTIIQNVCAEIDLDPPTAVVSSADPQIRQLQILSYRAGRDLLKDHDWSVLMTTRNFT 60

Query: 61  HW-----PFHLPQDYYRPLLGGAMVMLDLS----LARPVINAVDWGIVKRISHTP----W 107
                  P   P D+ R +     V+ + S    L  PV     W     ++  P    +
Sbjct: 61  ATGAIPEPTEPPADFQRYVANS--VIWNTSRLWQLNGPV-EPQTWERNTILNSNPVPQIY 117

Query: 108 YWIDGRMIHLSINSPATFRY--FSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIW 164
             + G++     +   T RY   SK WI +        +   D D    P  LL   +IW
Sbjct: 118 RMLGGKLAFFPNDVGETLRYEYVSKYWIAVMGGPTYAENWANDTDMARFPEDLLELSLIW 177

Query: 165 RWRRAQGLSFDDCLREFDLA 184
           RW+RA+GL + + L  F+ A
Sbjct: 178 RWKRAKGLDYGEELENFERA 197


>gi|86356743|ref|YP_468635.1| hypothetical protein RHE_CH01100 [Rhizobium etli CFN 42]
 gi|86280845|gb|ABC89908.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 235

 Score = 42.0 bits (97), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 15/196 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLL-----Q 55
           M++L I+  VC  + L     V  + D   + L     +AG ++    DW  L+     +
Sbjct: 1   MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLMRAHDWSALMVRRQFE 60

Query: 56  EIKIDHWPFHLPQDYYRPLLGGAM--VMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
               +  P   P  + R +    +  V    +L  PV     W     ++  P    W  
Sbjct: 61  ATGANPEPDEPPGAWDRFVANARIWNVSRLWALNGPV-EPQSWQRQTILNANPVPQIWRM 119

Query: 110 IDGRM-IHLSINSPA-TFRYFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
             GR+ I+ ++      + Y S  W+ ++       +   D D+   P  LL   +IWRW
Sbjct: 120 AGGRLDIYPNVAGETMEYAYISGFWVALNGGPNTAGNWANDTDTAHFPEELLELSLIWRW 179

Query: 167 RRAQGLSFDDCLREFD 182
           +RA+GL + + L  F+
Sbjct: 180 KRAKGLDYGEELASFE 195


>gi|316933869|ref|YP_004108851.1| hypothetical protein Rpdx1_2527 [Rhodopseudomonas palustris DX-1]
 gi|315601583|gb|ADU44118.1| hypothetical protein Rpdx1_2527 [Rhodopseudomonas palustris DX-1]
          Length = 233

 Score = 37.7 bits (86), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 102 ISHTPWYWI--DGRM---IHLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTY 156
            + TP  WI   G++     + +   A F Y     +  +  E K   T D D   L   
Sbjct: 110 FAATPGTWIMLGGKLNVYPAMPVGEAARFYYIRSRPVRSAAGERKASFTEDTDEFFLAQR 169

Query: 157 LLIKDIIWRWRRAQGLSFDDCLREFDLAL 185
           LL   +IWRWR  + + + + L  ++ AL
Sbjct: 170 LLELGLIWRWRAQKRMEYAEDLANYEKAL 198


>gi|15320621|ref|NP_203465.1| hypothetical protein Mx8p51 [Myxococcus phage Mx8]
 gi|15281731|gb|AAK94386.1|AF396866_51 p51 [Myxococcus phage Mx8]
          Length = 242

 Score = 37.0 bits (84), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 40/190 (21%)

Query: 23  YQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQE----IKIDHWPFHLPQDYYR------ 72
           Y + D + V L   L+  G+++     W  L Q+     ++    + +P DY R      
Sbjct: 28  YASADVNLVQLCRLLKSLGQDMVRDYQWTHLQQQWTFATQVGLANYEMPPDYNRFVDQTG 87

Query: 73  -------PLLGGAMVMLDLSLARPVINAVDWGIVKRISHTP-----WYWIDGRMI-HLSI 119
                  PLLG              ++A  W +++ ++        +  + G  + H + 
Sbjct: 88  WNRTQRMPLLG-------------PLSAQGWQLLQVLTSAGTVDVMYRLVGGEFVLHPTP 134

Query: 120 NSPA--TFRYFSKNWIIDSNKEAKHHITADD--DSTLLPTYLLIKDIIWRWRRAQGLSFD 175
            S A   + Y S +W+     E  +    +   D+      LL+  +  RW+RA+G    
Sbjct: 135 ESVADIAYEYVSSHWVGTGGSETPNADAPESGGDTLFFDRRLLVCGLKLRWQRAKGFDST 194

Query: 176 DCLREFDLAL 185
            C  ++D AL
Sbjct: 195 ACQDDYDKAL 204


Searching..................................................done


Results from round 2




>gi|254781137|ref|YP_003065550.1| hypothetical protein CLIBASIA_05195 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040814|gb|ACT57610.1| hypothetical protein CLIBASIA_05195 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 195

 Score =  270 bits (691), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 195/195 (100%), Positives = 195/195 (100%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
           MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID
Sbjct: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60

Query: 61  HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSIN 120
           HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSIN
Sbjct: 61  HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSIN 120

Query: 121 SPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLRE 180
           SPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLRE
Sbjct: 121 SPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLRE 180

Query: 181 FDLALIAEKILWLGG 195
           FDLALIAEKILWLGG
Sbjct: 181 FDLALIAEKILWLGG 195


>gi|150397023|ref|YP_001327490.1| hypothetical protein Smed_1820 [Sinorhizobium medicae WSM419]
 gi|150028538|gb|ABR60655.1| hypothetical protein Smed_1820 [Sinorhizobium medicae WSM419]
          Length = 200

 Score =  238 bits (608), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 66/192 (34%), Positives = 109/192 (56%), Gaps = 4/192 (2%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
           M +L  +N VCD+V LS F+ VY + + + + +V+  Q+AG+EI  + DW + L++ ++ 
Sbjct: 1   MTLLTAINQVCDVVSLSPFDNVYGSAEPNAMTMVALAQEAGDEIARRADWQKTLRQHRVA 60

Query: 61  HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRI-SHTPWYWIDGRMIHLSI 119
               +LP D+ R   GG++   + +  RPV N   W ++  + S  P+++I    +  S 
Sbjct: 61  VASENLPDDFQRLTPGGSVRTAEKAFVRPVTNGGQWAVIAGMPSMQPYFFIRAGQVQFSP 120

Query: 120 ---NSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDD 176
                 A   Y SKNW++      +   TADDD+TL P  LL+K I+WRW+R +GL+++D
Sbjct: 121 ASAAQGAVIDYVSKNWVLHDPDGPQATFTADDDTTLFPERLLLKGIVWRWKRQKGLAYED 180

Query: 177 CLREFDLALIAE 188
            L EF+  L  E
Sbjct: 181 NLAEFEADLAQE 192


>gi|227822438|ref|YP_002826410.1| hypothetical protein NGR_c18930 [Sinorhizobium fredii NGR234]
 gi|227341439|gb|ACP25657.1| hypothetical protein NGR_c18930 [Sinorhizobium fredii NGR234]
          Length = 200

 Score =  237 bits (604), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 4/192 (2%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
           M +L ++N V D+V L RF++VY   D +   +V+  ++AG EI  + DW ++L+   + 
Sbjct: 1   MTLLTLINDVADIVSLDRFDSVYGTTDPNAQTMVALAEEAGAEIARRADWKRMLKTHAVS 60

Query: 61  HWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRI-SHTPWYWIDGRMIHLSI 119
             P  LP DY R + GGA+   D    RP+ N   W ++  + S  P+  + GR + +S 
Sbjct: 61  ASPEILPADYQRLVPGGAVRAADGRFFRPITNGAQWAVIVGVASAEPYCHLSGREMLVSP 120

Query: 120 ---NSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDD 176
              ++ AT  Y S+NW++    E +    ADDD+TL P  LL K +IWRW+R +GL+F+D
Sbjct: 121 AASSAGATIDYLSRNWVLGDPYEERDTFRADDDTTLFPERLLKKGLIWRWKRQKGLAFED 180

Query: 177 CLREFDLALIAE 188
            L EF+  L+ E
Sbjct: 181 NLAEFEADLLQE 192


>gi|315122529|ref|YP_004063018.1| hypothetical protein CKC_03905 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495931|gb|ADR52530.1| hypothetical protein CKC_03905 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 150

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 103/150 (68%), Positives = 125/150 (83%)

Query: 46  LKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHT 105
           +++DWP+LL+ + I+  PFHLPQD++RPL  GA++M D SLARPVI++VDW IVK+ S  
Sbjct: 1   MRIDWPELLRTVTINSLPFHLPQDFHRPLPSGAVIMPDHSLARPVIHSVDWEIVKKTSQD 60

Query: 106 PWYWIDGRMIHLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWR 165
           PWYWID R++HLS + PATFRYFSKNW+I S +  K  ITADDDST+ P YLLIKDIIWR
Sbjct: 61  PWYWIDNRILHLSPSPPATFRYFSKNWVIGSQQNPKQIITADDDSTIFPRYLLIKDIIWR 120

Query: 166 WRRAQGLSFDDCLREFDLALIAEKILWLGG 195
           WRRAQGLSFDD LREFD A+IAEKIL+LGG
Sbjct: 121 WRRAQGLSFDDYLREFDSAVIAEKILFLGG 150


>gi|117925016|ref|YP_865633.1| hypothetical protein Mmc1_1719 [Magnetococcus sp. MC-1]
 gi|117608772|gb|ABK44227.1| conserved hypothetical protein [Magnetococcus sp. MC-1]
          Length = 233

 Score =  198 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 14/203 (6%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
           M++L+++    DL+G+ R   V  + D +   L++  Q  G  +  +  WP++ +E    
Sbjct: 1   MSLLSMVQQAADLIGVQRPTQVVSSSDPTIRQLLAVAQMEGRTLAARGPWPEMTREASFT 60

Query: 61  HWPFHLPQDYYR--PLLGGAM--VMLDLSLARPV---INAVDWGIVK-RISHTPWYWIDG 112
                   D     P +   +   M + +  R V   ++A+DW   +   S TP+     
Sbjct: 61  TVAGQANYDLQSLVPDMDFLINNTMWNRTTGRVVGGPMSAMDWQANRAHGSATPFPTFRI 120

Query: 113 RM-IHLSINSPAT-----FRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
           R  + +   +PA      F Y SKNW   S  + +    AD D  +L  +L+   ++WR+
Sbjct: 121 REGVLMFAPTPAQSESYSFEYHSKNWCKSSAGDGQQGWQADSDVGILSEHLMTLGLVWRF 180

Query: 167 RRAQGLSFDDCLREFDLALIAEK 189
           ++A+G  +      +   +  +K
Sbjct: 181 KKAKGFDYSQEYGAYQNEVSQKK 203


>gi|218509117|ref|ZP_03506995.1| hypothetical protein RetlB5_17140 [Rhizobium etli Brasil 5]
          Length = 232

 Score =  196 bits (498), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 15/198 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQ----- 55
           M++L I+  VC  + L     V  + D     L+    +AG ++    DW  L       
Sbjct: 1   MSLLTIIQNVCAEIDLDPPAAVMSSADPQVRQLLILTTRAGRDLLKDHDWSVLTTVRDFT 60

Query: 56  EIKIDHWPFHLPQDYYRPLLGGAM--VMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
              +   P   P D+ R +    +  V    SL  PV     W  +  ++  P    W  
Sbjct: 61  ATGVIPEPAEPPSDFKRFVENSMIWNVSRLWSLNGPV-EPQAWDRLTILNSNPVPQVWRM 119

Query: 110 IDGRMIHLSINSPAT--FRYFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
           + G++     +   T  + Y S NWI I+           D D+   P  LL   +IWRW
Sbjct: 120 LGGKLAFFPNDVGETLRYEYVSSNWIAINGGTTYAADWANDTDTARFPEDLLELSLIWRW 179

Query: 167 RRAQGLSFDDCLREFDLA 184
           +RA+GL + + L  ++ A
Sbjct: 180 KRAKGLDYGEELENYERA 197


>gi|13470678|ref|NP_102247.1| hypothetical protein mll0453 [Mesorhizobium loti MAFF303099]
 gi|14021420|dbj|BAB48033.1| mll0453 [Mesorhizobium loti MAFF303099]
          Length = 233

 Score =  191 bits (484), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 16/201 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKV-DWPQL--LQEI 57
           M +L+++  VC ++GL+    V+   D   V L +   +  + I     DW +   L  +
Sbjct: 1   MTILSVIQQVCPVIGLNVPTAVFSATDRELVELQALSNEMAQRIAFDTRDWTKFKTLCTL 60

Query: 58  KIDHWP--FHLPQDYYRPLLGGAMVMLDLSLARPVINAVD---W-GIVKRISHT---PWY 108
             D     F+ P DY R +L  A V    S   P  +  D   W GI  +   +    W 
Sbjct: 61  TGDGSTVGFNFPSDYKR-MLKKARVWPSASPFAPYTHYSDTDQWLGITVQNFRSIIGAWT 119

Query: 109 WIDGRMI---HLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWR 165
            I  +++    ++  S A F Y +   I D +   K   TADDD   L   +L   +IW+
Sbjct: 120 MIGEQILIKPAMANLSTAQFYYITNQIIKDKDGAPKVAFTADDDVFRLDERVLKLGMIWQ 179

Query: 166 WRRAQGLSFDDCLREFDLALI 186
           W+  +G ++ + +  ++ AL 
Sbjct: 180 WKANKGQAYAEDMTNYEDALA 200


>gi|152983270|ref|YP_001353889.1| hypothetical protein mma_2199 [Janthinobacterium sp. Marseille]
 gi|151283347|gb|ABR91757.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 233

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 14/200 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
           M+ LAI+ TVC  +G+        + D   + L++  ++ G++   + +W  L  E    
Sbjct: 1   MSCLAIIKTVCRRIGILAPNAAVGSTDPQIIQLLAISEEEGQDQADRYNWQSLQTEAIFT 60

Query: 61  HWPFHL--PQDYYRPLLGGAM--VMLDLSLARPVI---NAVDWGIVKR----ISHTPWYW 109
                +  P     P     +   + + +L RPV    +  DW  V           +  
Sbjct: 61  TVATQVQGPLSTIAPNCDYIVNNTIWNRTLRRPVYGPKSEQDWQQVVAFQINGPFNAYRI 120

Query: 110 IDGRMIHLS---INSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
           I+ ++             F Y S+NW+  S        T D D+  +   L+I   +WRW
Sbjct: 121 INDQINFYPDPVAGQTCAFEYISRNWVNTSVAATSSVWTNDADTPKISDQLMILGTVWRW 180

Query: 167 RRAQGLSFDDCLREFDLALI 186
           ++A+GL + +   +++  + 
Sbjct: 181 KQAKGLDYAEDFAKYERRMA 200


>gi|327191476|gb|EGE58496.1| hypothetical protein RHECNPAF_300006 [Rhizobium etli CNPAF512]
          Length = 234

 Score =  189 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 50/197 (25%), Positives = 80/197 (40%), Gaps = 15/197 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLL-----Q 55
           M++L I+  VC  + L     V  + D   + L     +AG ++    DW  L+     Q
Sbjct: 1   MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLMRAHDWSALMVRRQFQ 60

Query: 56  EIKIDHWPFHLPQDYYRPLLGGAM--VMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
               +  P   P D+ R      +  V    SL  PV     W     ++  P    W  
Sbjct: 61  ATGANPEPDEPPGDWDRFAANARIWNVSRLWSLNGPV-EPQSWQRQTILAANPVPQIWRM 119

Query: 110 IDGRM-IHLSINSPA-TFRYFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
             GR+ I+ S+      + Y S  W+ ++    A  +   D D+   P  LL   +IWRW
Sbjct: 120 AGGRLDIYPSVAGETMEYAYISGFWVAVNGGATAAGNWANDTDTARFPEELLELSLIWRW 179

Query: 167 RRAQGLSFDDCLREFDL 183
           +RA+GL + + L  F+ 
Sbjct: 180 KRAKGLDYGEELVSFER 196


>gi|116253671|ref|YP_769509.1| hypothetical protein RL3931 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258319|emb|CAK09421.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 232

 Score =  188 bits (476), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 74/198 (37%), Gaps = 15/198 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQE---- 56
           M++L I+  VC  + L     V  + D     L     +AG ++    DW  L+      
Sbjct: 1   MSILTIIQNVCAEIDLDPPTAVVSSADPQIRQLQILSYRAGRDLLKDHDWSVLMTTRNFT 60

Query: 57  -IKIDHWPFHLPQDYYRPLLGGAM--VMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
                  P   P D+ R +    +        L  PV     W     ++  P    +  
Sbjct: 61  ATGAIPEPTEPPADFQRYVANSVIWNTSRLWQLNGPV-EPQTWERNTILNSNPVPQIYRM 119

Query: 110 IDGRMIHLSINSPAT--FRYFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
           + G++     +   T  + Y SK WI +        +   D D    P  LL   +IWRW
Sbjct: 120 LGGKLAFFPNDVGETLRYEYVSKYWIAVMGGPTYAENWANDTDMARFPEDLLELSLIWRW 179

Query: 167 RRAQGLSFDDCLREFDLA 184
           +RA+GL + + L  F+ A
Sbjct: 180 KRAKGLDYGEELENFERA 197


>gi|86356743|ref|YP_468635.1| hypothetical protein RHE_CH01100 [Rhizobium etli CFN 42]
 gi|86280845|gb|ABC89908.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 235

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 15/197 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLL-----Q 55
           M++L I+  VC  + L     V  + D   + L     +AG ++    DW  L+     +
Sbjct: 1   MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLMRAHDWSALMVRRQFE 60

Query: 56  EIKIDHWPFHLPQDYYRPLLGGAM--VMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
               +  P   P  + R +    +  V    +L  PV     W     ++  P    W  
Sbjct: 61  ATGANPEPDEPPGAWDRFVANARIWNVSRLWALNGPV-EPQSWQRQTILNANPVPQIWRM 119

Query: 110 IDGRMIHLSINSPAT--FRYFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
             GR+      +  T  + Y S  W+ ++       +   D D+   P  LL   +IWRW
Sbjct: 120 AGGRLDIYPNVAGETMEYAYISGFWVALNGGPNTAGNWANDTDTAHFPEELLELSLIWRW 179

Query: 167 RRAQGLSFDDCLREFDL 183
           +RA+GL + + L  F+ 
Sbjct: 180 KRAKGLDYGEELASFER 196


>gi|218678663|ref|ZP_03526560.1| hypothetical protein RetlC8_07169 [Rhizobium etli CIAT 894]
          Length = 235

 Score =  184 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 77/198 (38%), Gaps = 15/198 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLL-----Q 55
           M++L I+  VC  + L     V  + D   + L     +AG ++  + DW  LL      
Sbjct: 1   MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLMREHDWSALLVDRQFT 60

Query: 56  EIKIDHWPFHLPQDYYRPLLGGAM--VMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
              ++  P   P D+ R      +        L  PV     W     ++  P    W  
Sbjct: 61  ATGVNPEPAEPPADWDRFAANAKIWNAARLWQLNGPV-EPQTWQRQTILNANPVPQIWRM 119

Query: 110 IDGRMIHLSINSPAT--FRYFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
             G++      +  T  + Y S  W+ ++       +   D D+   P  LL   +IWRW
Sbjct: 120 AGGKLDIYPNAAGETIRYEYISGFWVAVNGGSSFAGNWANDTDTARFPEDLLELSLIWRW 179

Query: 167 RRAQGLSFDDCLREFDLA 184
           +RA+GL + + +  F+ +
Sbjct: 180 KRAKGLDYGEEIASFERS 197


>gi|209548340|ref|YP_002280257.1| hypothetical protein Rleg2_0735 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534096|gb|ACI54031.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 235

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 76/198 (38%), Gaps = 15/198 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQ----- 55
           M++L I+  VC  + L     V  + D   + L     +AG ++  + DW  L+      
Sbjct: 1   MSLLTIIQNVCAEIDLDPPTAVMSSADPQIMQLRILSTRAGRDLVREHDWSALMVRRQFV 60

Query: 56  EIKIDHWPFHLPQDYYRPLLGGAM--VMLDLSLARPVINAVDWGIVKRISHTP----WYW 109
               +  P   P D+ R      +        L  PV     W     ++  P    W  
Sbjct: 61  ATGANPEPAEPPDDWNRFAANAKIWNASRLWQLNGPV-EPQTWQRQTILNSNPVPQIWRM 119

Query: 110 IDGRMIHLSINSPAT--FRYFSKNWI-IDSNKEAKHHITADDDSTLLPTYLLIKDIIWRW 166
             G++      S  T  + Y S  W+ ++       +   D D+   P  LL   +IWRW
Sbjct: 120 AGGKLDIYPNVSGETMEYAYISGFWVAVNGGATTAANWANDTDTARFPEDLLELSLIWRW 179

Query: 167 RRAQGLSFDDCLREFDLA 184
           +RA+GL + + +  F+ +
Sbjct: 180 KRAKGLDYGEEIASFERS 197


>gi|110632594|ref|YP_672802.1| hypothetical protein Meso_0233 [Mesorhizobium sp. BNC1]
 gi|110283578|gb|ABG61637.1| conserved hypothetical protein [Chelativorans sp. BNC1]
          Length = 234

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 18/204 (8%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQ----E 56
           M +L+        +   R   V  + DE  V + +  ++A  EI    DW +L +     
Sbjct: 1   MTILSAAQDAIAELVGRRPAAVVSSTDEICVEITALAKKAAVEIAKACDWQELTEFYEIT 60

Query: 57  IKIDHWPFHLPQDYYRPLLGGAMVMLDLS----LARPVINAVDWGI--VKRISH-TPWYW 109
              +   +  P DY R  +  A  + D +        V N  +W +  +++I+  TP  W
Sbjct: 61  ADGEASAYPFPSDYDR--MVQASEIFDPNNWCWGYHHVPNYSEWILYEIRKIAMLTPGIW 118

Query: 110 -IDGRMIHL----SINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIW 164
            I     H     +    A F Y SKN  +  N+  K  IT+D DS +L   LL   +IW
Sbjct: 119 TIRKNQFHFMPTPAAGQKAIFPYISKNIFLSQNEAPKDTITSDSDSFVLDERLLTLSLIW 178

Query: 165 RWRRAQGLSFDDCLREFDLALIAE 188
           +++  +GL +   + ++++AL  E
Sbjct: 179 KYKAMKGLDYQQEVDDYNIALSQE 202


>gi|319783506|ref|YP_004142982.1| hypothetical protein Mesci_3815 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169394|gb|ADV12932.1| hypothetical protein Mesci_3815 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 234

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 74/195 (37%), Gaps = 14/195 (7%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKID 60
           M++L ++     ++G+     VY   +   V +         EI    DW +LL      
Sbjct: 1   MSILDVVKGAATVLGMDVPTLVYGATNREMVEMQELANVMASEIVDAYDWQKLLVLKTFT 60

Query: 61  ----HWPFHLPQDYYRPLLGGAMVM--LDLSLARPVINAVDW---GIVKRISHTPWYWID 111
                  F+LP DY R     ++       +    + +   W    +    +   ++ I 
Sbjct: 61  GDGIAADFNLPDDYERMQQTSSLWSSRWLWATNH-LTSPDQWIELQVTPIATVNGYWIIF 119

Query: 112 GRMIH----LSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWR 167
           G   H    ++ +    F Y S   +  SN   K   T D D+  L   LL   II+RW+
Sbjct: 120 GDQFHQWPVMANSETVKFFYVSNQIVQASNSSLKPAFTEDADTFRLSERLLKLAIIYRWK 179

Query: 168 RAQGLSFDDCLREFD 182
           + +GL++     +F+
Sbjct: 180 QNKGLAYQQAQDDFE 194


>gi|316933869|ref|YP_004108851.1| hypothetical protein Rpdx1_2527 [Rhodopseudomonas palustris DX-1]
 gi|315601583|gb|ADU44118.1| hypothetical protein Rpdx1_2527 [Rhodopseudomonas palustris DX-1]
          Length = 233

 Score =  107 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 71/198 (35%), Gaps = 13/198 (6%)

Query: 1   MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQL--LQEIK 58
           M VLA        +   +  +++   D+    L         +I    DW  L  L E+ 
Sbjct: 1   MTVLAAAQAAGLRLLGVKPISLFSAPDQVAQELADLAGDVAADIVGAHDWQALKELAELA 60

Query: 59  ID--HWPFHLPQDYYRPLLGGAMVMLDLSL--ARPVINAVDWGIVK--RISHTP--WYWI 110
            D       LP D+ R +    +      L       +  DW  +     + TP  W  +
Sbjct: 61  GDGATIALDLPADFGRMVKDPKIHSKRYPLTDFCAAADEDDWLRLADLGFAATPGTWIML 120

Query: 111 DGRM---IHLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWR 167
            G++     + +   A F Y     +  +  E K   T D D   L   LL   +IWRWR
Sbjct: 121 GGKLNVYPAMPVGEAARFYYIRSRPVRSAAGERKASFTEDTDEFFLAQRLLELGLIWRWR 180

Query: 168 RAQGLSFDDCLREFDLAL 185
             + + + + L  ++ AL
Sbjct: 181 AQKRMEYAEDLANYEKAL 198


>gi|15320621|ref|NP_203465.1| hypothetical protein Mx8p51 [Myxococcus phage Mx8]
 gi|15281731|gb|AAK94386.1|AF396866_51 p51 [Myxococcus phage Mx8]
          Length = 242

 Score = 87.9 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 80/203 (39%), Gaps = 22/203 (10%)

Query: 2   NVLAILNTVCDLVGLSRFETV--YQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKI 59
              +I+N     +GL   +    Y + D + V L   L+  G+++     W  L Q+   
Sbjct: 5   TAASIINDAAVELGLLATDVADPYASADVNLVQLCRLLKSLGQDMVRDYQWTHLQQQWTF 64

Query: 60  DH----WPFHLPQDYYRPLLGGAMVMLDLSLARPVI---NAVDWGIVKRISHTP-----W 107
                   + +P DY R +        + +   P++   +A  W +++ ++        +
Sbjct: 65  ATQVGLANYEMPPDYNRFVDQ---TGWNRTQRMPLLGPLSAQGWQLLQVLTSAGTVDVMY 121

Query: 108 YWIDGR-MIHLSINSPA--TFRYFSKNWIIDSNKEA--KHHITADDDSTLLPTYLLIKDI 162
             + G  ++H +  S A   + Y S +W+     E        +  D+      LL+  +
Sbjct: 122 RLVGGEFVLHPTPESVADIAYEYVSSHWVGTGGSETPNADAPESGGDTLFFDRRLLVCGL 181

Query: 163 IWRWRRAQGLSFDDCLREFDLAL 185
             RW+RA+G     C  ++D AL
Sbjct: 182 KLRWQRAKGFDSTACQDDYDKAL 204


>gi|254720057|ref|ZP_05181868.1| hypothetical protein Bru83_11051 [Brucella sp. 83/13]
 gi|265985064|ref|ZP_06097799.1| predicted protein [Brucella sp. 83/13]
 gi|306839391|ref|ZP_07472205.1| Hypothetical protein BROD_2247 [Brucella sp. NF 2653]
 gi|264663656|gb|EEZ33917.1| predicted protein [Brucella sp. 83/13]
 gi|306405514|gb|EFM61779.1| Hypothetical protein BROD_2247 [Brucella sp. NF 2653]
          Length = 239

 Score = 85.6 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 75/200 (37%), Gaps = 19/200 (9%)

Query: 6   ILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQ----EIKIDH 61
           ++N       L          D S + +  +L    EE+  ++DWP  +      I    
Sbjct: 7   LMNRAARECKLKAPGAWVPATDLSYMDMKDYLSDTVEELLQRLDWPNPVTIDLPVIGTGA 66

Query: 62  WPFHLPQDYYRPLLGGAMVMLDLSLAR---PVINAVDWGIVKRISH---TPWYWIDGRMI 115
             ++LP D+ R       V    +  R   P+ +   W  +K++       +Y I G   
Sbjct: 67  EDYNLPPDFLRVTRDELAVYEPTTTRRACIPITSNGAWSHLKQLGSAGGNRYYRIQGSDG 126

Query: 116 HLSI--------NSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWR 167
              I        N      Y SKNW   +    K     ++   L P  L+   ++WR+R
Sbjct: 127 AYKIGFYRPLETNQRVIVSYVSKNW-NVAAGAYKSEWVVEEAECLFPADLVRLGVVWRFR 185

Query: 168 RAQGLSFDDCLREFDLALIA 187
           RA+G+ + D L E++  L  
Sbjct: 186 RAKGMPYADRLNEYEGRLSR 205


>gi|126442517|ref|YP_001063339.1| hypothetical protein BURPS668_A2345 [Burkholderia pseudomallei 668]
 gi|126222008|gb|ABN85513.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
          Length = 294

 Score = 74.8 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 10/139 (7%)

Query: 58  KIDHWPFHLPQDYYRPLL-GGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMI- 115
                 + +P D    +   G        L  P+ +  +W ++K         +  R++ 
Sbjct: 122 SFGQESYPIPSDADHFIQHTGWDRSFRWQLVGPL-SPQEWQVLKSGISPTGPRLRFRIMG 180

Query: 116 --HLSINSPATF-----RYFSKNWIIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRR 168
                   PA+       Y+S  W   +   ++    AD D+ +L   L I  +I RW  
Sbjct: 181 GQIYVNPVPASLDNLVLEYYSTGWCQSATGASQTAWAADTDTPVLQDRLFILGMIARWLN 240

Query: 169 AQGLSFDDCLREFDLALIA 187
            +G        +++ A+ A
Sbjct: 241 RKGFDSSVAQDDYEKAVDA 259



 Score = 40.9 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 15 GLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVD----WPQLLQEIKID 60
          GL    TV  N D++   ++    + GEE+  +      WP + +E   +
Sbjct: 5  GLPTPTTVIGNTDKTVRQMLIHATRIGEELAARGSLNDGWPVMRKEYTFN 54


>gi|167907342|ref|ZP_02494547.1| hypothetical protein BpseN_34250 [Burkholderia pseudomallei NCTC
           13177]
          Length = 143

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 8/104 (7%)

Query: 92  NAVDWGIVKRISHTPWYWIDGRMI---HLSINSPATF-----RYFSKNWIIDSNKEAKHH 143
           +  +W ++K         +  R++         PA+       Y+S  W   +   ++  
Sbjct: 5   SPQEWQVLKSGISPTGPRLRFRIMGGQIYVNPVPASLDNLVLEYYSTGWCQSATGASQTA 64

Query: 144 ITADDDSTLLPTYLLIKDIIWRWRRAQGLSFDDCLREFDLALIA 187
             AD D+ +L   L I  +I RW   +G        +++ A+ A
Sbjct: 65  WAADTDTPVLQDRLFILGMIARWLNRKGFDSSVAQDDYEKAVDA 108


>gi|315122530|ref|YP_004063019.1| hypothetical protein CKC_03910 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|313495932|gb|ADR52531.1| hypothetical protein CKC_03910 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
          Length = 37

 Score = 53.6 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/37 (70%), Positives = 33/37 (89%)

Query: 1  MNVLAILNTVCDLVGLSRFETVYQNQDESTVLLVSFL 37
          M+VL +LNT+CDLVGLSRFE +Y+NQDE+ VLL+S L
Sbjct: 1  MSVLTLLNTICDLVGLSRFEKIYENQDENAVLLISLL 37


>gi|284990869|ref|YP_003409423.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
           43160]
 gi|284064114|gb|ADB75052.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
           43160]
          Length = 567

 Score = 41.6 bits (96), Expect = 0.057,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 3/138 (2%)

Query: 22  VYQNQDESTVLLVSFLQQA-GEEICLKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMV 80
           V    +     ++  +++A G  I       +   +I         P    RPL G  +V
Sbjct: 313 VIGAGEPLNPEVIEQVRRAWGLTIRDGYGQTETTAQIGNTPGSEVKPGSMGRPLPGVPVV 372

Query: 81  MLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSINSPATF--RYFSKNWIIDSNK 138
           ++D    RPV    +  I   ++  P   + G        + A     Y + +       
Sbjct: 373 LVDPITGRPVEGPGEGEICLDLAQHPLPLMTGYQGDPERAAEAMAGGYYHTGDVASVDAD 432

Query: 139 EAKHHITADDDSTLLPTY 156
               +I   DD      Y
Sbjct: 433 GYVTYIGRTDDVFKASDY 450


>gi|298482608|ref|ZP_07000793.1| hypothetical protein HMPREF0106_03075 [Bacteroides sp. D22]
 gi|298271315|gb|EFI12891.1| hypothetical protein HMPREF0106_03075 [Bacteroides sp. D22]
          Length = 421

 Score = 40.1 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 21/164 (12%)

Query: 24  QNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLD 83
            +    ++++ +     G ++  +  W    +   +D    +  QD    +L G +  + 
Sbjct: 251 ASGSRVSLIMTARETATGVDLASRKSWTNRFRTTDVDKLCAYAAQD----VLDGFLKDIS 306

Query: 84  LSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSINSPATFRYFSKNWIIDSNKEAKHH 143
              AR V       +   ++      ++ R+     N   T     +NW+  + +  ++H
Sbjct: 307 KEFARKVQQGNTVVLRVSLADNAINTMNSRI-----NGTTTLSAHIRNWVRKNAQGGRYH 361

Query: 144 IT-ADDDSTLLPTYLLIKDIIWRWRRAQGL-----SFDDCLREF 181
           I  A DDS +         I    + + GL     +F D L  +
Sbjct: 362 IQGAVDDSLIFD------SIQIPAKDSDGLPMDCITFADNLVNY 399


>gi|237721920|ref|ZP_04552401.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229448789|gb|EEO54580.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 421

 Score = 39.7 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 22/175 (12%)

Query: 13  LVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYR 72
           +V L +  +       S + + +     G ++  +  W    +   +D    +  QD   
Sbjct: 241 IVDLQKDISAASGSRVSLI-MTARETATGVDLASRKSWTNRFRTTDVDKLCAYAAQD--- 296

Query: 73  PLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSINSPATFRYFSKNW 132
            +L G +  +    AR V       +   +S      ++ R+     N   T     +NW
Sbjct: 297 -VLDGFLKDISKEFARKVQQGNTVVLRVSLSDNAINTMNSRI-----NGSTTLSAHIRNW 350

Query: 133 IIDSNKEAKHHIT-ADDDSTLLPTYLLIKDIIWRWRRAQGL-----SFDDCLREF 181
           +  + +  ++HI  A DDS +         I    + + GL     +F D L  +
Sbjct: 351 VRKNAQGGRYHIQGAVDDSLIFD------SIQIPAKDSDGLPMDCITFADNLVNY 399


>gi|160884697|ref|ZP_02065700.1| hypothetical protein BACOVA_02686 [Bacteroides ovatus ATCC 8483]
 gi|156109732|gb|EDO11477.1| hypothetical protein BACOVA_02686 [Bacteroides ovatus ATCC 8483]
          Length = 421

 Score = 39.3 bits (90), Expect = 0.29,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 22/175 (12%)

Query: 13  LVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYR 72
           +V L +  +       S + + +     G ++  +  W    +   +D    +  QD   
Sbjct: 241 IVDLQKDISAASGSRVSLI-MTARETATGVDLASRKSWTNRFRTTDVDKLCAYAAQD--- 296

Query: 73  PLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSINSPATFRYFSKNW 132
            +L G +  +    AR V       +   ++      ++ R+     N   T     +NW
Sbjct: 297 -VLDGFLKDISKEFARKVQQGNTVVLRVSLADNAINTMNSRI-----NGSTTLSAHIRNW 350

Query: 133 IIDSNKEAKHHIT-ADDDSTLLPTYLLIKDIIWRWRRAQGL-----SFDDCLREF 181
           +  + +  ++HI  A DDS +         I    + + GL     +F D L  +
Sbjct: 351 VRKNAQGGRYHIQGAVDDSLIFD------SIQIPAKDSDGLPMDCITFADNLVNY 399


>gi|299144946|ref|ZP_07038014.1| hypothetical protein HMPREF9010_00378 [Bacteroides sp. 3_1_23]
 gi|298515437|gb|EFI39318.1| hypothetical protein HMPREF9010_00378 [Bacteroides sp. 3_1_23]
          Length = 420

 Score = 38.9 bits (89), Expect = 0.41,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 10/123 (8%)

Query: 33  LVSFLQQAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVIN 92
           + +     G ++  +  W    +   +D    +  QD    +L G +  +    AR V  
Sbjct: 259 MTARETATGIDLASRKSWTNRFRTTDVDKLCAYAAQD----VLDGFLKDISKEFARRVQQ 314

Query: 93  AVDWGIVKRISHTPWYWIDGRMIHLSINSPATFRYFSKNWIIDSNKEAKHHIT-ADDDST 151
                +   ++      ++ R+      S     Y  +NW+  + +  ++HI  A DDS 
Sbjct: 315 GNTIVLRVSLADNAVNTMNSRI----NGSTTLSAYI-RNWVRKNAQGGRYHIQGAVDDSL 369

Query: 152 LLP 154
           +  
Sbjct: 370 IFD 372


>gi|295085702|emb|CBK67225.1| hypothetical protein [Bacteroides xylanisolvens XB1A]
          Length = 421

 Score = 38.2 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 61/174 (35%), Gaps = 20/174 (11%)

Query: 13  LVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYR 72
           +V L +  +       S + + +     G ++  +  W    +   +D    +  QD   
Sbjct: 241 IVDLQKDISAASGSRVSLI-MTARETATGVDLASRKSWTNRFRTTDVDKLCAYAAQD--- 296

Query: 73  PLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSINSPATFRYFSKNW 132
            +L G +  +    AR V       +   ++      ++ R+     N   T     +NW
Sbjct: 297 -VLDGFLKDISKEFARKVQQGNTVVLRVSLADNAINTMNSRI-----NGSTTLSAHIRNW 350

Query: 133 IIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGL-----SFDDCLREF 181
           +  + +  ++HI       ++   L+   I    + + GL     +F D L  +
Sbjct: 351 VRKNAQGGRYHIQ-----GVVDDSLIFDSIQIPAKDSDGLPMDCITFADNLVNY 399


>gi|294647830|ref|ZP_06725382.1| hypothetical protein CW1_0035 [Bacteroides ovatus SD CC 2a]
 gi|294806226|ref|ZP_06765073.1| hypothetical protein CW3_0037 [Bacteroides xylanisolvens SD CC 1b]
 gi|292636738|gb|EFF55204.1| hypothetical protein CW1_0035 [Bacteroides ovatus SD CC 2a]
 gi|294446482|gb|EFG15102.1| hypothetical protein CW3_0037 [Bacteroides xylanisolvens SD CC 1b]
          Length = 402

 Score = 38.2 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 61/174 (35%), Gaps = 20/174 (11%)

Query: 13  LVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYR 72
           +V L +  +       S + + +     G ++  +  W    +   +D    +  QD   
Sbjct: 222 IVDLQKDISAASGSRVSLI-MTARETATGVDLASRKSWTNRFRTTDVDKLCAYAAQD--- 277

Query: 73  PLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSINSPATFRYFSKNW 132
            +L G +  +    AR V       +   ++      ++ R+     N   T     +NW
Sbjct: 278 -VLDGFLKDISKEFARKVQQGNTVVLRVSLADNAINTMNSRI-----NGSTTLSAHIRNW 331

Query: 133 IIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGL-----SFDDCLREF 181
           +  + +  ++HI       ++   L+   I    + + GL     +F D L  +
Sbjct: 332 VRKNAQGGRYHIQ-----GVVDDSLIFDSIQIPAKDSDGLPMDCITFADNLVNY 380


>gi|293373777|ref|ZP_06620123.1| hypothetical protein CUY_4255 [Bacteroides ovatus SD CMC 3f]
 gi|292631267|gb|EFF49899.1| hypothetical protein CUY_4255 [Bacteroides ovatus SD CMC 3f]
          Length = 402

 Score = 38.2 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 61/174 (35%), Gaps = 20/174 (11%)

Query: 13  LVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYR 72
           +V L +  +       S + + +     G ++  +  W    +   +D    +  QD   
Sbjct: 222 IVDLQKDISAASGSRVSLI-MTARETATGVDLASRKSWTNRFRTTDVDKLCAYAAQD--- 277

Query: 73  PLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSINSPATFRYFSKNW 132
            +L G +  +    AR V       +   ++      ++ R+     N   T     +NW
Sbjct: 278 -VLDGFLKDISKEFARKVQQGNTVVLRVSLADNAINTMNSRI-----NGSTTLSAHIRNW 331

Query: 133 IIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGL-----SFDDCLREF 181
           +  + +  ++HI       ++   L+   I    + + GL     +F D L  +
Sbjct: 332 VRKNAQGGRYHIQ-----GVVDDSLIFDSIQIPAKDSDGLPMDCITFADNLVNY 380


>gi|237717101|ref|ZP_04547582.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262405870|ref|ZP_06082420.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|229443084|gb|EEO48875.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262356745|gb|EEZ05835.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
          Length = 421

 Score = 38.2 bits (87), Expect = 0.57,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 61/174 (35%), Gaps = 20/174 (11%)

Query: 13  LVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYR 72
           +V L +  +       S + + +     G ++  +  W    +   +D    +  QD   
Sbjct: 241 IVDLQKDISAASGSRVSLI-MTARETATGVDLASRKSWTNRFRTTDVDKLCAYAAQD--- 296

Query: 73  PLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPWYWIDGRMIHLSINSPATFRYFSKNW 132
            +L G +  +    AR V       +   ++      ++ R+     N   T     +NW
Sbjct: 297 -VLDGFLKDISKEFARKVQQGNTVVLRVSLADNAINTMNSRI-----NGSTTLSAHIRNW 350

Query: 133 IIDSNKEAKHHITADDDSTLLPTYLLIKDIIWRWRRAQGL-----SFDDCLREF 181
           +  + +  ++HI       ++   L+   I    + + GL     +F D L  +
Sbjct: 351 VRKNAQGGRYHIQ-----GVVDDSLIFDSIQIPAKDSDGLPMDCITFADNLVNY 399


>gi|89069975|ref|ZP_01157307.1| putative oligopeptide ABC transporter, periplasmic-binding protein
           [Oceanicola granulosus HTCC2516]
 gi|89044423|gb|EAR50554.1| putative oligopeptide ABC transporter, periplasmic-binding protein
           [Oceanicola granulosus HTCC2516]
          Length = 606

 Score = 36.2 bits (82), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 39/125 (31%), Gaps = 3/125 (2%)

Query: 42  EEICLKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVI---NAVDWGI 98
            E+ L      +L++ + +   F    D   P+     V+ D  L R V    N   WG 
Sbjct: 184 RELALLAGMRPILKKAQFEGMDFAEEGDSVVPIASSPYVIDDYELGRYVSLKRNPDYWGF 243

Query: 99  VKRISHTPWYWIDGRMIHLSINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYLL 158
                    Y ID   +    +  A F  F    +    +          D   +   L+
Sbjct: 244 GVVPFRNGTYNIDEYRLEFFGDETAAFEAFKAGIVNTQREFNAGRWLERYDFPAIDEGLI 303

Query: 159 IKDII 163
           +K  I
Sbjct: 304 VKSEI 308


>gi|145345498|ref|XP_001417245.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577472|gb|ABO95538.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 381

 Score = 36.2 bits (82), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 20/58 (34%)

Query: 38 QQAGEEICLKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVD 95
           +A  + C    W               +P+D+ R +L   +V  +   A P   A D
Sbjct: 15 TRAALDACRDARWRATFAAHGFRAVALEVPEDFIRYVLADGVVARETDAAMPRRVAQD 72


>gi|257481998|ref|ZP_05636039.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331008858|gb|EGH88914.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 357

 Score = 35.9 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 4   LAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWP 63
           + ++NTVC L+   R ++V++       L+     + G ++   +D  ++ +E+     P
Sbjct: 259 IEVVNTVCALLDQLRPDSVHR---PHASLITYVQDRPGHDLRYAIDASKIQRELGWT--P 313

Query: 64  FHLPQDYYRPLLGGAMVMLDLSLARPVINAVDW 96
               +   R  +   +   +        +   W
Sbjct: 314 EESFESGIRKTVQWYLDNPEWVAHVKSGSYQQW 346


>gi|298485664|ref|ZP_07003743.1| dTDP-glucose 4,6-dehydratase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298159690|gb|EFI00732.1| dTDP-glucose 4,6-dehydratase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 357

 Score = 35.9 bits (81), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 4   LAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWP 63
           + ++NTVC L+   R ++V++       L+     + G ++   +D  ++ +E+     P
Sbjct: 259 IEVVNTVCALLDQLRPDSVHR---PHASLITYVQDRPGHDLRYAIDASKIQRELGWT--P 313

Query: 64  FHLPQDYYRPLLGGAMVMLDLSLARPVINAVDW 96
               +   R  +   +   +        +   W
Sbjct: 314 EESFESGIRKTVQWYLDNPEWVAHVKSGSYQQW 346


>gi|47225730|emb|CAG08073.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 363

 Score = 35.9 bits (81), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 4/83 (4%)

Query: 44  ICLKVDWPQLLQEIKIDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVINAVDWGIVKRIS 103
           +     W  L    + D WP + P DY     GG  +         V N  ++ +   ++
Sbjct: 15  LLAANGWHDL-DNTEYDCWPINSPNDYNMISCGGLEMAWVQRPPEKVTNGEEFNVSYTVT 73

Query: 104 HTPWYW---IDGRMIHLSINSPA 123
            +  ++   +  R+   S  S A
Sbjct: 74  ASDSFYDYAVRNRIFQFSNASEA 96


>gi|330951113|gb|EGH51373.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae Cit 7]
          Length = 357

 Score = 35.5 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 5/93 (5%)

Query: 4   LAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWP 63
           L ++NTVC L+   R +           L+     + G ++   +D  ++ +E+     P
Sbjct: 259 LEVVNTVCALLDQLRPD---SAHRPHASLITYVQDRPGHDLRYAIDASKIQRELGW--VP 313

Query: 64  FHLPQDYYRPLLGGAMVMLDLSLARPVINAVDW 96
               +   R  +   +   +        +   W
Sbjct: 314 EESFESGIRKTVQWYLDNPEWVAHVKSGSYQQW 346


>gi|213967233|ref|ZP_03395382.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato T1]
 gi|213928075|gb|EEB61621.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato T1]
          Length = 384

 Score = 35.5 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 5/93 (5%)

Query: 4   LAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWP 63
           L ++NTVC L+   R +           L+     + G ++   +D  ++ +E+     P
Sbjct: 286 LEVVNTVCALLDQLRPD---SAHRPHANLITYVQDRPGHDLRYAIDASKIQRELGW--VP 340

Query: 64  FHLPQDYYRPLLGGAMVMLDLSLARPVINAVDW 96
               +   R  +   +   +        +   W
Sbjct: 341 EESFESGIRKTVQWYLDNPEWVAHVKSGSYQQW 373


>gi|28868296|ref|NP_790915.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28851533|gb|AAO54610.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|331019593|gb|EGH99649.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 357

 Score = 35.5 bits (80), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 5/93 (5%)

Query: 4   LAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWP 63
           L ++NTVC L+   R +           L+     + G ++   +D  ++ +E+     P
Sbjct: 259 LEVVNTVCALLDQLRPD---SAHRPHANLITYVQDRPGHDLRYAIDASKIQRELGW--VP 313

Query: 64  FHLPQDYYRPLLGGAMVMLDLSLARPVINAVDW 96
               +   R  +   +   +        +   W
Sbjct: 314 EESFESGIRKTVQWYLDNPEWVAHVKSGSYQQW 346


>gi|302186453|ref|ZP_07263126.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. syringae
           642]
          Length = 357

 Score = 35.5 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 5/93 (5%)

Query: 4   LAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWP 63
           L ++NTVC L+   R +           L+     + G ++   +D  ++ +E+     P
Sbjct: 259 LEVVNTVCALLDQMRPD---SAHRPHASLITYVQDRPGHDLRYAIDASKIQRELGW--VP 313

Query: 64  FHLPQDYYRPLLGGAMVMLDLSLARPVINAVDW 96
               +   R  +   +   +        +   W
Sbjct: 314 EESFESGIRKTVQWYLDNPEWVAHVKSGSYQQW 346


>gi|330972804|gb|EGH72870.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 180

 Score = 35.5 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 5/93 (5%)

Query: 4   LAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWP 63
           L ++NTVC L+   R +           L+     + G ++   +D  ++ +E+     P
Sbjct: 82  LEVVNTVCALLDQLRPD---SAHRPHASLITYVQDRPGHDLRYAIDASKIQRELGW--VP 136

Query: 64  FHLPQDYYRPLLGGAMVMLDLSLARPVINAVDW 96
               +   R  +   +   +        +   W
Sbjct: 137 EESFESGIRKTVQWYLDNPEWVAHVKSGSYQQW 169


>gi|301381031|ref|ZP_07229449.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato
           Max13]
 gi|302059360|ref|ZP_07250901.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato K40]
 gi|302134877|ref|ZP_07260867.1| dTDP-glucose 4,6-dehydratase [Pseudomonas syringae pv. tomato NCPPB
           1108]
          Length = 357

 Score = 35.5 bits (80), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 5/93 (5%)

Query: 4   LAILNTVCDLVGLSRFETVYQNQDESTVLLVSFLQQAGEEICLKVDWPQLLQEIKIDHWP 63
           L ++NTVC L+   R +           L+     + G ++   +D  ++ +E+     P
Sbjct: 259 LEVVNTVCALLDQLRPD---SAHRPHANLITYVQDRPGHDLRYAIDASKIQRELGW--VP 313

Query: 64  FHLPQDYYRPLLGGAMVMLDLSLARPVINAVDW 96
               +   R  +   +   +        +   W
Sbjct: 314 EESFESGIRKTVQWYLDNPEWVAHVKSGSYQQW 346


>gi|260205543|ref|ZP_05773034.1| pyruvate dehydrogenase subunit E1 [Mycobacterium tuberculosis K85]
          Length = 930

 Score = 35.1 bits (79), Expect = 5.8,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 9/105 (8%)

Query: 30  TVLLVSFLQQAGEEICLKVDWPQLLQE-IKIDHWPFHLPQDYYRPLLGGAMVMLDLSLAR 88
              +++       ++     W +L ++ + I+      P    RP     +     +   
Sbjct: 777 AAQMLAAEWDVAADVWSVTSWGELNRDGVTIETEKLRHP---DRPAGVPYVTRALENARG 833

Query: 89  PVINAVDWGIVKRISHTPWY-----WIDGRMIHLSINSPATFRYF 128
           PVI   DW         PW       +       S   PA  RYF
Sbjct: 834 PVIAVSDWMRAVPEQIRPWVPGTYLTLGTDGFGFSDTRPAARRYF 878


>gi|289574930|ref|ZP_06455157.1| pyruvate dehydrogenase E1 component aceE [Mycobacterium
           tuberculosis K85]
 gi|289539361|gb|EFD43939.1| pyruvate dehydrogenase E1 component aceE [Mycobacterium
           tuberculosis K85]
          Length = 901

 Score = 35.1 bits (79), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 9/105 (8%)

Query: 30  TVLLVSFLQQAGEEICLKVDWPQLLQE-IKIDHWPFHLPQDYYRPLLGGAMVMLDLSLAR 88
              +++       ++     W +L ++ + I+      P    RP     +     +   
Sbjct: 748 AAQMLAAEWDVAADVWSVTSWGELNRDGVTIETEKLRHP---DRPAGVPYVTRALENARG 804

Query: 89  PVINAVDWGIVKRISHTPWY-----WIDGRMIHLSINSPATFRYF 128
           PVI   DW         PW       +       S   PA  RYF
Sbjct: 805 PVIAVSDWMRAVPEQIRPWVPGTYLTLGTDGFGFSDTRPAARRYF 849


>gi|289762405|ref|ZP_06521783.1| pyruvate dehydrogenase subunit E1 [Mycobacterium tuberculosis GM
           1503]
 gi|289709911|gb|EFD73927.1| pyruvate dehydrogenase subunit E1 [Mycobacterium tuberculosis GM
           1503]
          Length = 811

 Score = 34.7 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 9/105 (8%)

Query: 30  TVLLVSFLQQAGEEICLKVDWPQLLQE-IKIDHWPFHLPQDYYRPLLGGAMVMLDLSLAR 88
              +++       ++     W +L ++ + I+      P    RP     +     +   
Sbjct: 658 AAQMLAAEWDVAADVWSVTSWGELNRDGVAIETEKLRHP---DRPAGVPYVTRALENARG 714

Query: 89  PVINAVDWGIVKRISHTPWY-----WIDGRMIHLSINSPATFRYF 128
           PVI   DW         PW       +       S   PA  RYF
Sbjct: 715 PVIAVSDWMRAVPEQIRPWVPGTYLTLGTDGFGFSDTRPAARRYF 759


>gi|218753966|ref|ZP_03532762.1| pyruvate dehydrogenase subunit E1 [Mycobacterium tuberculosis GM
           1503]
          Length = 832

 Score = 34.3 bits (77), Expect = 8.2,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 9/105 (8%)

Query: 30  TVLLVSFLQQAGEEICLKVDWPQLLQE-IKIDHWPFHLPQDYYRPLLGGAMVMLDLSLAR 88
              +++       ++     W +L ++ + I+      P    RP     +     +   
Sbjct: 679 AAQMLAAEWDVAADVWSVTSWGELNRDGVAIETEKLRHP---DRPAGVPYVTRALENARG 735

Query: 89  PVINAVDWGIVKRISHTPWY-----WIDGRMIHLSINSPATFRYF 128
           PVI   DW         PW       +       S   PA  RYF
Sbjct: 736 PVIAVSDWMRAVPEQIRPWVPGTYLTLGTDGFGFSDTRPAARRYF 780


>gi|159466858|ref|XP_001691615.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158278961|gb|EDP04723.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 3100

 Score = 34.3 bits (77), Expect = 9.3,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 25/77 (32%), Gaps = 7/77 (9%)

Query: 50  WPQLLQEIKIDHWPFHLPQD--YYRPLLGGAMVMLDLSLARPVINAVDWGIVKRISHTPW 107
           W QLL+ I +      LP +  Y  P         D     P I+          +  PW
Sbjct: 224 WGQLLRAIVMKAASGALPSNLAYASPPPSAPSAPGDWQATAPAIDPA-----TSNASQPW 278

Query: 108 YWIDGRMIHLSINSPAT 124
               GR  + S  + A 
Sbjct: 279 PLARGRYSYTSSGATAA 295


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.309    0.129    0.350 

Lambda     K      H
   0.267   0.0398    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,319,589,315
Number of Sequences: 14124377
Number of extensions: 118781979
Number of successful extensions: 364064
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 363968
Number of HSP's gapped (non-prelim): 81
length of query: 195
length of database: 4,842,793,630
effective HSP length: 131
effective length of query: 64
effective length of database: 2,992,500,243
effective search space: 191520015552
effective search space used: 191520015552
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.8 bits)
S2: 77 (34.3 bits)