RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254781137|ref|YP_003065550.1| hypothetical protein CLIBASIA_05195 [Candidatus Liberibacter asiaticus str. psy62] (195 letters) >gnl|CDD|31954 COG1768, COG1768, Predicted phosphohydrolase [General function prediction only]. Length = 230 Score = 28.0 bits (62), Expect = 1.9 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 10/69 (14%) Query: 115 IHLSINSPATFRYFSKNWIIDSNKEAKH--HITADDDSTLLPTYLLIKDIIWRWRRAQG- 171 +HL++ P F + W K KH + +D LLP DI W R + Sbjct: 9 LHLALGVPKPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLP-----GDISWAMRLEEAE 63 Query: 172 --LSFDDCL 178 L F L Sbjct: 64 EDLRFIGDL 72 >gnl|CDD|37653 KOG2442, KOG2442, KOG2442, Uncharacterized conserved protein, contains PA domain [General function prediction only]. Length = 541 Score = 26.9 bits (59), Expect = 4.0 Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 4/53 (7%) Query: 59 IDHWPFHLPQDYYRPLLGGAMVMLDLSLARPVIN-AVDWGIVKRISHTPWYWI 110 + P+ + G M L L+ I AV W + + W WI Sbjct: 291 VHRLPYGAARFPTLAPRLGNMSYRLLFLSILCIAVAVVWAV---FRNEDWAWI 340 >gnl|CDD|38928 KOG3724, KOG3724, KOG3724, Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]. Length = 973 Score = 26.5 bits (58), Expect = 5.3 Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 6/70 (8%) Query: 13 LVGLSRFETVYQNQDE--STVLLVSFLQQAGEEICLKVDWPQL--LQEIKIDHWPFHLPQ 68 L + + + S + L +I KVD ++ +K + + Sbjct: 515 LFFVLSNVSDVDDTTTLPSQLELFMAGGW--RQIFFKVDISKVSRFSFVKTSLLALRIDK 572 Query: 69 DYYRPLLGGA 78 Y LG + Sbjct: 573 SYEGSYLGIS 582 >gnl|CDD|143910 pfam00139, Lectin_legB, Legume lectin domain. Length = 232 Score = 26.1 bits (58), Expect = 7.1 Identities = 11/40 (27%), Positives = 15/40 (37%) Query: 118 SINSPATFRYFSKNWIIDSNKEAKHHITADDDSTLLPTYL 157 SI S A+ ++S K + I D S L L Sbjct: 145 SIISVASESASFVPLDLNSGKPIQVWIDYDGSSKRLSVTL 184 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.325 0.141 0.462 Gapped Lambda K H 0.267 0.0733 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 2,581,943 Number of extensions: 134728 Number of successful extensions: 325 Number of sequences better than 10.0: 1 Number of HSP's gapped: 325 Number of HSP's successfully gapped: 7 Length of query: 195 Length of database: 6,263,737 Length adjustment: 89 Effective length of query: 106 Effective length of database: 4,340,536 Effective search space: 460096816 Effective search space used: 460096816 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 55 (25.0 bits)