RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254781140|ref|YP_003065553.1| hypothetical protein
CLIBASIA_05210 [Candidatus Liberibacter asiaticus str. psy62]
         (44 letters)



>1hdh_A Arylsulfatase; hydrolase, formylglycine hydrate; 1.3A
          {Pseudomonas aeruginosa} (A:445-536)
          Length = 92

 Score = 26.4 bits (58), Expect = 1.2
 Identities = 7/27 (25%), Positives = 10/27 (37%)

Query: 3  IYDGSWKLISYDPETGRTVWYMLDNQK 29
          I  G WK +      G   W + D  +
Sbjct: 24 IRQGDWKAVYLPAPVGPATWQLYDLAR 50


>2qzu_A Putative sulfatase YIDJ; Q64XZ4_bacfr, arylsulfatase,
          BFR123, NESG, structural genomics, PSI-2, protein
          structure initiative; 1.70A {Bacteroides fragilis
          YCH46} (A:395-491)
          Length = 97

 Score = 24.1 bits (52), Expect = 6.6
 Identities = 1/27 (3%), Positives = 6/27 (22%)

Query: 3  IYDGSWKLISYDPETGRTVWYMLDNQK 29
          +    +    +  +       + D   
Sbjct: 22 LRTDRYTYAVHATDGKIDNVILFDRTN 48


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.320    0.139    0.473 

Gapped
Lambda     K      H
   0.267   0.0627    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 391,191
Number of extensions: 10971
Number of successful extensions: 92
Number of sequences better than 10.0: 1
Number of HSP's gapped: 92
Number of HSP's successfully gapped: 10
Length of query: 44
Length of database: 4,956,049
Length adjustment: 16
Effective length of query: 28
Effective length of database: 4,415,169
Effective search space: 123624732
Effective search space used: 123624732
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.3 bits)