Query gi|254781141|ref|YP_003065554.1| hypothetical protein CLIBASIA_05225 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 196
No_of_seqs 124 out of 155
Neff 6.0
Searched_HMMs 33803
Date Wed Jun 1 23:07:23 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781141.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2rag_A Dipeptidase; aminohydr 79.2 4.3 0.00013 20.5 5.0 49 90-142 367-415 (417)
2 >3b40_A PVDM, probable dipepti 78.7 4.1 0.00012 20.7 4.8 48 89-140 365-412 (417)
3 >2i5g_A Amidohydrolase; NYSGXR 77.5 4.1 0.00012 20.7 4.5 44 90-137 281-324 (325)
4 >2ev1_A Hypothetical protein R 68.9 6.8 0.0002 19.2 3.9 31 96-126 33-63 (95)
5 >1y10_A Hypothetical protein R 66.8 7.9 0.00023 18.8 3.9 42 97-142 22-71 (96)
6 >3fdg_A Dipeptidase AC. metall 59.1 12 0.00036 17.5 4.6 42 91-136 312-353 (355)
7 >1wa5_C Importin alpha RE-expo 51.8 15 0.00044 17.0 3.2 34 23-56 22-59 (116)
8 >2w84_A Peroxisomal membrane p 47.3 6.3 0.00019 19.4 0.7 31 93-123 25-55 (70)
9 >2p01_A Alpha-2-macroglobulin 46.5 19 0.00056 16.2 3.0 28 92-124 2-29 (108)
10 >2fcw_A Alpha-2-macroglobulin 45.4 20 0.00059 16.1 3.6 35 92-131 3-43 (109)
11 >2yqf_A Ankyrin-1; death domai 43.4 19 0.00058 16.2 2.7 45 98-142 24-74 (111)
12 >1fad_A Protein (FADD protein) 43.4 21 0.00064 15.9 4.3 27 98-124 20-46 (99)
13 >1b4u_A LIGA, LIGB, protocatec 42.3 22 0.00066 15.8 2.9 43 92-134 43-85 (139)
14 >2c0s_A Conserved domain prote 42.2 22 0.00066 15.8 2.9 39 100-140 11-50 (64)
15 >3ff5_A PEX14P, peroxisomal bi 41.8 6.8 0.0002 19.2 0.2 30 94-123 21-50 (54)
16 >1q7e_A Hypothetical protein Y 41.3 17 0.00049 16.6 2.1 24 107-130 223-246 (255)
17 >2o71_A Death domain-containin 41.2 14 0.00041 17.1 1.7 28 97-124 29-56 (115)
18 >3dfg_A Xcrecx, regulatory pro 41.0 20 0.00059 16.1 2.4 24 103-126 34-57 (63)
19 >1ywf_A Phosphotyrosine protei 39.8 19 0.00056 16.2 2.2 22 103-124 270-291 (296)
20 >3ezq_A Tumor necrosis factor 38.6 21 0.00062 15.9 2.3 21 104-124 21-41 (62)
21 >3ezq_B Protein FADD; apoptosi 38.5 10 0.0003 18.0 0.7 23 102-124 16-38 (122)
22 >2of5_H Leucine-rich repeat an 37.4 13 0.00038 17.4 1.0 27 98-124 19-45 (118)
23 >2ib1_A Death domain containin 34.2 25 0.00075 15.4 2.1 30 104-133 5-36 (60)
24 >2kru_A Light-independent prot 34.1 20 0.00058 16.1 1.5 44 81-128 8-51 (63)
25 >1wov_A Heme oxygenase 2; HOMO 33.3 31 0.00091 14.8 6.2 60 90-149 73-132 (165)
26 >2gf5_A FADD protein; death do 32.5 17 0.0005 16.6 1.0 21 104-124 21-41 (102)
27 >1ul1_X Flap endonuclease-1; p 31.8 9 0.00027 18.4 -0.5 28 91-123 206-234 (290)
28 >1xk7_A Crotonobetainyl-COA:ca 31.2 22 0.00066 15.8 1.4 25 102-126 232-256 (263)
29 >2ztd_A Holliday junction ATP- 31.2 33 0.00098 14.6 2.4 27 100-126 7-33 (58)
30 >1wxp_A THO complex subunit 1; 30.2 24 0.00072 15.5 1.5 28 97-124 23-50 (110)
31 >1rxw_A Flap structure-specifi 29.2 31 0.00091 14.8 1.8 26 91-121 222-248 (268)
32 >1ngr_A P75 low affinity neuro 28.7 29 0.00085 15.0 1.6 44 90-133 7-53 (85)
33 >2of5_A Death domain-containin 28.3 19 0.00055 16.3 0.6 23 102-124 34-56 (114)
34 >1ich_A TNF-1, tumor necrosis 27.8 34 0.001 14.5 1.9 19 105-123 27-45 (112)
35 >1ixr_A Holliday junction DNA 26.0 16 0.00049 16.6 0.0 42 85-126 126-169 (191)
36 >1b0n_B Protein (SINI protein) 25.9 41 0.0012 14.0 3.2 21 101-121 13-33 (57)
37 >1itu_A Renal dipeptidase; gly 25.7 41 0.0012 14.0 5.2 45 92-140 298-342 (369)
38 >3eus_A DNA-binding protein; s 25.3 42 0.0012 13.9 3.9 37 89-125 2-38 (86)
39 >1ugp_A NitrIle hydratase alph 25.2 40 0.0012 14.1 1.8 25 92-116 12-36 (154)
40 >3b9e_A Chitinase A; TIM-barre 25.0 42 0.0013 13.9 3.6 31 90-120 135-166 (371)
41 >2zpb_A NitrIle hydratase subu 24.0 44 0.0013 13.8 2.1 26 92-117 12-37 (155)
42 >2h9d_A Salicylate biosynthesi 23.6 45 0.0013 13.7 3.1 45 81-125 29-80 (101)
43 >3cz8_A Putative sporulation-s 23.4 45 0.0013 13.7 3.1 28 93-120 90-117 (258)
44 >3hht_A NitrIle hydratase alph 22.6 33 0.00097 14.6 1.0 24 93-116 13-36 (158)
45 >1ji6_A Pesticidial crystal pr 22.4 31 0.00092 14.8 0.8 25 102-126 20-44 (96)
46 >3bxw_B Chitinase domain-conta 22.1 48 0.0014 13.5 3.1 28 93-120 93-120 (265)
47 >1vf8_A YM1, secretory protein 21.4 50 0.0015 13.4 3.6 28 93-120 89-116 (304)
48 >1a76_A Flap endonuclease-1 pr 21.3 50 0.0015 13.4 1.8 29 90-123 210-239 (261)
49 >2ou3_A Tellurite resistance p 21.1 41 0.0012 14.0 1.3 34 92-125 84-117 (140)
50 >1itx_A Chitinase A1, glycosyl 20.9 51 0.0015 13.4 3.2 29 93-121 142-170 (344)
51 >1d2v_C Myeloperoxidase; heme- 20.9 51 0.0015 13.4 3.5 53 82-134 44-105 (144)
52 >1wdc_B Scallop myosin; calciu 20.6 51 0.0015 13.3 2.3 19 106-124 9-29 (40)
53 >1br2_A Myosin; muscle protein 20.6 52 0.0015 13.3 3.3 28 99-126 48-75 (174)
54 >1wb0_A Chitinase 1, chitotrio 20.1 53 0.0016 13.3 3.6 29 93-121 89-117 (374)
No 1
>>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, PSI-2, protein structure initiative; 2.00A {Caulobacter crescentus CB15} (A:)
Probab=79.22 E-value=4.3 Score=20.52 Aligned_cols=49 Identities=14% Similarity=0.068 Sum_probs=40.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 83658989999999999999997599989997205999999999999999997
Q gi|254781141|r 90 FPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQ 142 (196)
Q Consensus 90 iPe~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~D~R~i~vl~~Am~y~~~~ 142 (196)
.|.+.|+ ...-+|.+.+...|||+++|..|.--..+.++..++.+.+-.
T Consensus 367 p~gl~~~----~~~p~l~~~L~~rG~s~~di~ki~g~N~lRv~~~v~~~a~~~ 415 (417)
T 2rag_A 367 MDGFEDI----TDLPKITARLKAEGYSDADIEAIWSGNVLRIVDAAQAYAKSV 415 (417)
T ss_dssp BBTBSSG----GGTHHHHHHHHHTTCCHHHHHHHHTHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCH----HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7676798----889999999998798999999998487999999999999984
No 2
>>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa} (A:)
Probab=78.67 E-value=4.1 Score=20.71 Aligned_cols=48 Identities=13% Similarity=-0.010 Sum_probs=40.0
Q ss_pred HCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 5836589899999999999999975999899972059999999999999999
Q gi|254781141|r 89 LFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQ 140 (196)
Q Consensus 89 ~iPe~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~D~R~i~vl~~Am~y~~ 140 (196)
.+|.|.|+ ...-+|.+.+...|||++||..|.--..+.|+..+|.+..
T Consensus 365 ~~~gl~~~----~~~~~l~~~L~~rGyse~di~ki~GgN~lRv~~~v~~~a~ 412 (417)
T 3b40_A 365 GVDGWKDV----SEIRNVTAELITRGYSDADIAKLWGGNFLRAWGEVQKRAK 412 (417)
T ss_dssp CBBTBCSG----GGHHHHHHHHHHHTCCHHHHHHHTTHHHHHHHHHHHHTC-
T ss_pred CCCCCCCH----HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88877798----8899999999986989999999998889999999999862
No 3
>>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa} (A:)
Probab=77.50 E-value=4.1 Score=20.67 Aligned_cols=44 Identities=9% Similarity=-0.075 Sum_probs=36.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 836589899999999999999975999899972059999999999999
Q gi|254781141|r 90 FPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQI 137 (196)
Q Consensus 90 iPe~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~D~R~i~vl~~Am~ 137 (196)
+|.|.|+ ....+|.+.+...|||+++|..|.--..+.++...|.
T Consensus 281 ~~gl~~~----~~~~~l~~~L~~rG~s~~~i~ki~ggN~lRv~~~v~~ 324 (325)
T 2i5g_A 281 PLGIRTV----GEFPNLTETLLKRGXPERVVRKVXGENWVRVLRDVWG 324 (325)
T ss_dssp CBTCSSG----GGTHHHHHHHHHTTCCHHHHHHHHTHHHHHHHHHHHC
T ss_pred CCCCCCH----HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 8677887----7889999999986989999999998999999999858
No 4
>>2ev1_A Hypothetical protein RV1264/MT1302; alpha-helical, regulatory domain of adenylyl cyclase, oleic acid, lyase; HET: OLA 1PE; 1.60A {Mycobacterium tuberculosis} PDB: 2ev2_A* 2ev3_A* 2ev4_A* (A:1-75,A:169-188)
Probab=68.94 E-value=6.8 Score=19.23 Aligned_cols=31 Identities=10% Similarity=-0.059 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCH
Q ss_conf 8999999999999999759998999720599
Q gi|254781141|r 96 PAQRENFFKNLFRIGNILGFQKEEMVDITDH 126 (196)
Q Consensus 96 ~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~D~ 126 (196)
+..+..++.++++++.+.|||.+||....-+
T Consensus 33 eGtAR~ERAELI~WLl~rGit~deIr~a~~P 63 (95)
T 2ev1_A 33 GGTARAERAKLVEWLLEQGITPDEIRATNPP 63 (95)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHSSSC
T ss_pred CCCCHHHHHHHHHHHHHCCCCHHHHHHCCCH
T ss_conf 7741278999999999769887776123505
No 5
>>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A* (A:1-58,A:139-176)
Probab=66.76 E-value=7.9 Score=18.76 Aligned_cols=42 Identities=10% Similarity=-0.081 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHC--------CHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999997599989997205--------999999999999999997
Q gi|254781141|r 97 AQRENFFKNLFRIGNILGFQKEEMVDIT--------DHRLLSLAYYAQIGLQSQ 142 (196)
Q Consensus 97 ~k~~~~~~~i~~~~~~~Gfs~eEi~~v~--------D~R~i~vl~~Am~y~~~~ 142 (196)
..+..++.++++++.+.|||.+||.... .+|.-. +|.|--+.
T Consensus 22 GtAR~eRAELI~WLl~rGit~deIr~a~~PmLLasrrsraAE----vMRy~Al~ 71 (96)
T 1y10_A 22 GTARAERAKLVEWLLEQGITPDEIRATNPPLLLATRHSHAAE----AMRYTALE 71 (96)
T ss_dssp THHHHHHHHHHHHHHHTTCCHHHHHTSSSCTTTTTGGHHHHH----HHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH----HHHHHHHH
T ss_conf 630678999999999819988889874242310455478999----99999998
No 6
>>3fdg_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, MCSG, PSI-2, protein structure initiative; 1.80A {Rhodobacter sphaeroides 2} (A:)
Probab=59.06 E-value=12 Score=17.49 Aligned_cols=42 Identities=12% Similarity=0.037 Sum_probs=25.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHH
Q ss_conf 3658989999999999999997599989997205999999999999
Q gi|254781141|r 91 PQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQ 136 (196)
Q Consensus 91 Pe~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~D~R~i~vl~~Am 136 (196)
|.+.|+. ...+|...+...|||++||..|.--..+.++...+
T Consensus 312 ~gl~d~~----~~~~l~~~L~~rG~s~~~i~kI~g~N~~Rvl~~v~ 353 (355)
T 3fdg_A 312 QGIADVT----GLPALQAAMRAHGYDEPLMRKLCHENWYGLLERSW 353 (355)
T ss_dssp TTTCSGG----GHHHHHHHHHHHTCCHHHHHHHHTHHHHHHHHHHH
T ss_pred CCCCCHH----HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 8777877----89999999998699999999999899999999986
No 7
>>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} (C:327-442)
Probab=51.78 E-value=15 Score=16.96 Aligned_cols=34 Identities=12% Similarity=0.077 Sum_probs=23.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH----HHHHHHHHH
Q ss_conf 6899918999943899999999999----999999999
Q gi|254781141|r 23 IPDDSSPTLEKTYPETYHRIRYLRQ----KALNIINHF 56 (196)
Q Consensus 23 ~p~~p~~~L~~~DP~~Y~~~k~~~~----~~~~~~~~~ 56 (196)
...+.+.+|+++||.+|++...... .+.....-+
T Consensus 22 ~~t~~D~e~we~DP~eyi~~~~~~~~~~s~R~aa~~ll 59 (116)
T 1wa5_C 22 TLREEDVELFEDDPIEYIRRDLEGSDTDTRRRACTDFL 59 (116)
T ss_dssp SCCGGGTTTTTTCHHHHHHHHHHC----CHHHHHHHHH
T ss_pred HCCHHHHHHHHHCHHHHHHHHHCCCHHCCHHHHHHHHH
T ss_conf 01177787773168999888602100000767999999
No 8
>>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A (A:)
Probab=47.29 E-value=6.3 Score=19.44 Aligned_cols=31 Identities=13% Similarity=0.062 Sum_probs=25.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 5898999999999999999759998999720
Q gi|254781141|r 93 TKDPAQRENFFKNLFRIGNILGFQKEEMVDI 123 (196)
Q Consensus 93 ~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v 123 (196)
+.||.++..=...-+.|+.+-|.|++||..+
T Consensus 25 L~dp~V~~sp~~~K~~FL~sKGLt~~EI~~a 55 (70)
T 2w84_A 25 LQNSRVRQSPLATRRAFLKKKGLTDEEIDMA 55 (70)
T ss_dssp HCSTTGGGSCHHHHHHHHHHTTCCHHHHHHH
T ss_pred HCCHHHHCCCHHHHHHHHHHCCCCHHHHHHH
T ss_conf 5682120186899999999759999999999
No 9
>>2p01_A Alpha-2-macroglobulin receptor-associated protein; RAP, cell adhesion; NMR {Homo sapiens} PDB: 2p03_A (A:216-323)
Probab=46.54 E-value=19 Score=16.24 Aligned_cols=28 Identities=11% Similarity=0.335 Sum_probs=21.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
Q ss_conf 658989999999999999997599989997205
Q gi|254781141|r 92 QTKDPAQRENFFKNLFRIGNILGFQKEEMVDIT 124 (196)
Q Consensus 92 e~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~ 124 (196)
||.+|. -.+|-..|..-.||++|+.++-
T Consensus 2 EF~EPk-----Vq~LW~~A~~~NFt~dELeSlk 29 (108)
T 2p01_A 2 EFEEPR-----VIDLWDLAQSANLTDKELEAFR 29 (108)
T ss_dssp SSCCTT-----HHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999875-----3479999999999988888745
No 10
>>2fcw_A Alpha-2-macroglobulin receptor-associated protein; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} (A:)
Probab=45.41 E-value=20 Score=16.07 Aligned_cols=35 Identities=9% Similarity=0.276 Sum_probs=24.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH------CCHHHHHH
Q ss_conf 65898999999999999999759998999720------59999999
Q gi|254781141|r 92 QTKDPAQRENFFKNLFRIGNILGFQKEEMVDI------TDHRLLSL 131 (196)
Q Consensus 92 e~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v------~D~R~i~v 131 (196)
||.+|. -.+|-..|..-.||++|+.++ +.+|...+
T Consensus 3 EF~EPk-----Vq~LW~~A~~~NFt~dELeSlkeEL~HfE~kl~K~ 43 (109)
T 2fcw_A 3 EFEEPR-----VIDLWDLAQSANLTDKELEAFREELKHFEAKIEKH 43 (109)
T ss_dssp SCCSHH-----HHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHH-----HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 542428-----99999999985999899999999999999999999
No 11
>>2yqf_A Ankyrin-1; death domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yvi_A (A:)
Probab=43.42 E-value=19 Score=16.15 Aligned_cols=45 Identities=13% Similarity=0.064 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHC-CH-----HHHHHHHHHHHHHHHH
Q ss_conf 999999999999997599989997205-99-----9999999999999997
Q gi|254781141|r 98 QRENFFKNLFRIGNILGFQKEEMVDIT-DH-----RLLSLAYYAQIGLQSQ 142 (196)
Q Consensus 98 k~~~~~~~i~~~~~~~Gfs~eEi~~v~-D~-----R~i~vl~~Am~y~~~~ 142 (196)
.+..+..+...+|..+|||+.+|..|. +| ..+.-+-..|......
T Consensus 24 ia~~lg~~W~~lar~Lgls~~~I~~i~~~~~~~~~~~~~~mL~~W~~~~g~ 74 (111)
T 2yqf_A 24 ISEHLGLSWAELARELQFSVEDINRIRVENPNSLLEQSVALLNLWVIREGQ 74 (111)
T ss_dssp HHHHHTTTHHHHHHHTTCCHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 999985679999999096999999999867999999999999999998685
No 12
>>1fad_A Protein (FADD protein); apoptosis, death domain; NMR {Mus musculus} (A:)
Probab=43.39 E-value=21 Score=15.87 Aligned_cols=27 Identities=19% Similarity=0.190 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHC
Q ss_conf 999999999999997599989997205
Q gi|254781141|r 98 QRENFFKNLFRIGNILGFQKEEMVDIT 124 (196)
Q Consensus 98 k~~~~~~~i~~~~~~~Gfs~eEi~~v~ 124 (196)
.+..+..+...+|..+|||+.||..|-
T Consensus 20 ia~~i~~~W~~la~~Lgl~~~~I~~I~ 46 (99)
T 1fad_A 20 VCDNVGRDWKRLARELKVSEAKMDGIE 46 (99)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 999988869999999094999999999
No 13
>>1b4u_A LIGA, LIGB, protocatechuate 4,5-dioxygenase; extradiol type dioxygenase, non-heme iron protein; HET: DHB; 2.20A {Pseudomonas paucimobilis} (A:)
Probab=42.27 E-value=22 Score=15.77 Aligned_cols=43 Identities=7% Similarity=-0.019 Sum_probs=33.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHH
Q ss_conf 6589899999999999999975999899972059999999999
Q gi|254781141|r 92 QTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYY 134 (196)
Q Consensus 92 e~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~D~R~i~vl~~ 134 (196)
.+..|+-++.|+.+=..|...+|.|+||-..|-+--.+.+++.
T Consensus 43 sL~~~~~RerF~aDe~Ay~d~~~LteEqr~av~~RD~~~li~~ 85 (139)
T 1b4u_A 43 SLMKAENRERFKADESAYLDEWNLTPAAKAAVLARDYNAMIDE 85 (139)
T ss_dssp HTTSHHHHHHHHHCHHHHHHTTTCCHHHHHHHHHTCHHHHHHT
T ss_pred HHCCHHHHHHHHHCHHHHHHHCCCCHHHHHHHHCCCHHHHHHC
T ss_conf 9858999999984999998727999999999985569999986
No 14
>>2c0s_A Conserved domain protein; transferase, phosphatase, phosphorylation, sporulation, antithetical, negative regulator, spine; NMR {Bacillus anthracis} (A:)
Probab=42.24 E-value=22 Score=15.75 Aligned_cols=39 Identities=15% Similarity=0.104 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHH-HHHHHHHHH
Q ss_conf 99999999999975999899972059999999-999999999
Q gi|254781141|r 100 ENFFKNLFRIGNILGFQKEEMVDITDHRLLSL-AYYAQIGLQ 140 (196)
Q Consensus 100 ~~~~~~i~~~~~~~Gfs~eEi~~v~D~R~i~v-l~~Am~y~~ 140 (196)
+.-+.+|+.++..|||+.+.+-..+ +-+.. ++..|....
T Consensus 11 E~Kkeeli~Lv~~YGfth~Kvi~~S--QELD~Lin~~m~~~~ 50 (64)
T 2c0s_A 11 EAKKKELIYLVEKYGFTHHKVISFS--QELDRLLNLLIELKT 50 (64)
T ss_dssp HHHHHHHHHHHHHTCTTSHHHHHHH--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHH--HHHHHHHHHHHHHHC
T ss_conf 9999999999999789947999977--999999999998804
No 15
>>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus} (A:)
Probab=41.78 E-value=6.8 Score=19.23 Aligned_cols=30 Identities=13% Similarity=0.068 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 898999999999999999759998999720
Q gi|254781141|r 94 KDPAQRENFFKNLFRIGNILGFQKEEMVDI 123 (196)
Q Consensus 94 ~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v 123 (196)
.||.++..=...=+.|+.+-|.|++||..+
T Consensus 21 ~dp~V~~sp~~~K~~FL~sKGLt~~EI~~a 50 (54)
T 3ff5_A 21 QNSRVRQSPLATRRAFLKKKGLTDEEIDLA 50 (54)
T ss_dssp HCTTGGGSCHHHHHHHHHHTTCCHHHHHHH
T ss_pred CCHHHCCCCHHHHHHHHHHCCCCHHHHHHH
T ss_conf 682120186899999999769999999999
No 16
>>1q7e_A Hypothetical protein YFDW; structural genomics, intertwined dimer, PSI, protein structure initiative; HET: MSE; 1.60A {Escherichia coli} (A:1-211,A:385-428)
Probab=41.27 E-value=17 Score=16.61 Aligned_cols=24 Identities=13% Similarity=0.326 Sum_probs=18.5
Q ss_pred HHHHHHCCCCHHHHHHHCCHHHHH
Q ss_conf 999997599989997205999999
Q gi|254781141|r 107 FRIGNILGFQKEEMVDITDHRLLS 130 (196)
Q Consensus 107 ~~~~~~~Gfs~eEi~~v~D~R~i~ 130 (196)
-+.+..+|||++||..+-+.-+|.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~ 246 (255)
T 1q7e_A 223 AAVLQELGYSDDEIAAXKQNHAIE 246 (255)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHCCCCHHHHHHHHHCCCEE
T ss_conf 999998699999999999887677
No 17
>>2o71_A Death domain-containing protein cradd; raidd, apoptosis; 2.00A {Homo sapiens} (A:)
Probab=41.24 E-value=14 Score=17.13 Aligned_cols=28 Identities=7% Similarity=0.033 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHC
Q ss_conf 9999999999999997599989997205
Q gi|254781141|r 97 AQRENFFKNLFRIGNILGFQKEEMVDIT 124 (196)
Q Consensus 97 ~k~~~~~~~i~~~~~~~Gfs~eEi~~v~ 124 (196)
..+..+..+...+|..+|||+.+|..|.
T Consensus 29 ~ia~~l~~~W~~l~r~Lgls~~~I~~i~ 56 (115)
T 2o71_A 29 QLAQRLGPEWEPMVLSLGLSQTDIYRCK 56 (115)
T ss_dssp HHHHHCCTTHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHCHHHHHHHHHHCCCHHHHHHHH
T ss_conf 9999986359999999598999999999
No 18
>>3dfg_A Xcrecx, regulatory protein RECX; RECX RECA, homologous recombination, tandem repeats, three-helix bundle, cytoplasm; 1.50A {Xanthomonas campestris PV} (A:1-63)
Probab=40.96 E-value=20 Score=16.11 Aligned_cols=24 Identities=21% Similarity=0.140 Sum_probs=19.5
Q ss_pred HHHHHHHHHHCCCCHHHHHHHCCH
Q ss_conf 999999999759998999720599
Q gi|254781141|r 103 FKNLFRIGNILGFQKEEMVDITDH 126 (196)
Q Consensus 103 ~~~i~~~~~~~Gfs~eEi~~v~D~ 126 (196)
..+|+.-+...||++++|..+.|+
T Consensus 34 ~~EL~~KL~~kg~~~e~I~~vl~~ 57 (63)
T 3dfg_A 34 KKELNRKLQARGIEPEAAQAAVER 57 (63)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 999999998669999999999999
No 19
>>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} (A:)
Probab=39.84 E-value=19 Score=16.24 Aligned_cols=22 Identities=9% Similarity=0.055 Sum_probs=17.0
Q ss_pred HHHHHHHHHHCCCCHHHHHHHC
Q ss_conf 9999999997599989997205
Q gi|254781141|r 103 FKNLFRIGNILGFQKEEMVDIT 124 (196)
Q Consensus 103 ~~~i~~~~~~~Gfs~eEi~~v~ 124 (196)
+..+..|+.++|||+++|..+-
T Consensus 270 yGs~~~Yl~~~g~~~~~~~~lr 291 (296)
T 1ywf_A 270 YGSLGGYLRDAGISQATVNRMR 291 (296)
T ss_dssp HSSHHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHCCCCHHHHHHHH
T ss_conf 0999999988699999999999
No 20
>>3ezq_A Tumor necrosis factor receptor superfamily member 6; apoptosis, DISC, FAS, membrane,receptor, transmembrane; 2.73A {Homo sapiens} PDB: 1ddf_A (A:1-62)
Probab=38.65 E-value=21 Score=15.92 Aligned_cols=21 Identities=10% Similarity=0.120 Sum_probs=18.1
Q ss_pred HHHHHHHHHCCCCHHHHHHHC
Q ss_conf 999999997599989997205
Q gi|254781141|r 104 KNLFRIGNILGFQKEEMVDIT 124 (196)
Q Consensus 104 ~~i~~~~~~~Gfs~eEi~~v~ 124 (196)
.+...+|..+|||+.+|..|.
T Consensus 21 ~dWk~laR~Lglse~~Id~I~ 41 (62)
T 3ezq_A 21 SQVKGFVRKNGVNEAKIDEIK 41 (62)
T ss_dssp HHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHH
T ss_conf 989999999398999999999
No 21
>>3ezq_B Protein FADD; apoptosis, DISC, FAS, membrane,receptor, transmembrane; 2.73A {Homo sapiens} PDB: 1e3y_A 1e41_A (B:)
Probab=38.51 E-value=10 Score=18.03 Aligned_cols=23 Identities=17% Similarity=0.170 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHC
Q ss_conf 99999999997599989997205
Q gi|254781141|r 102 FFKNLFRIGNILGFQKEEMVDIT 124 (196)
Q Consensus 102 ~~~~i~~~~~~~Gfs~eEi~~v~ 124 (196)
+..+...+|..+|||+.+|..+.
T Consensus 16 lg~~W~~lar~Lgls~~~I~~i~ 38 (122)
T 3ezq_B 16 VGKDWRRLARQLKVSDTKIDSIE 38 (122)
T ss_dssp CCTTHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 82749999999298999999999
No 22
>>2of5_H Leucine-rich repeat and death domain-containing protein; death domain complex, apoptosis; 3.20A {Homo sapiens} (H:)
Probab=37.42 E-value=13 Score=17.37 Aligned_cols=27 Identities=15% Similarity=0.052 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHC
Q ss_conf 999999999999997599989997205
Q gi|254781141|r 98 QRENFFKNLFRIGNILGFQKEEMVDIT 124 (196)
Q Consensus 98 k~~~~~~~i~~~~~~~Gfs~eEi~~v~ 124 (196)
.+..+..+...+|..+|||+.||..|.
T Consensus 19 ia~~lg~~W~~La~~Lg~~~~~I~~I~ 45 (118)
T 2of5_H 19 VAGRLGLDWPAVALHLGVSYREVQRIR 45 (118)
T ss_dssp HHHTCCTTHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 999998779999999199999999999
No 23
>>2ib1_A Death domain containing membrane protein nradd; apoptosis, NOGO, FADD; NMR {Mus musculus} (A:15-74)
Probab=34.24 E-value=25 Score=15.40 Aligned_cols=30 Identities=20% Similarity=0.271 Sum_probs=21.4
Q ss_pred HHHHHHHHHCCCCHHHHHHHCCH--HHHHHHH
Q ss_conf 99999999759998999720599--9999999
Q gi|254781141|r 104 KNLFRIGNILGFQKEEMVDITDH--RLLSLAY 133 (196)
Q Consensus 104 ~~i~~~~~~~Gfs~eEi~~v~D~--R~i~vl~ 133 (196)
.+.+..|..+|||+.+|..+.+. +...+|+
T Consensus 5 ~dW~~LA~~LG~~~~~I~~i~~~~~p~~~~L~ 36 (60)
T 2ib1_A 5 KGWQELAGHLGYQAEAVETMACDQMPAYTLLR 36 (60)
T ss_dssp STHHHHHHHHTCCHHHHHHHTTSSCHHHHHHH
T ss_pred CCHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH
T ss_conf 67999998909099999989815648999999
No 24
>>2kru_A Light-independent protochlorophyllide reductase subunit B; NESG, PSI, BCHB, bacteriochlorophyll biosynthesis, chlorophyll biosynthesis; NMR {Chlorobaculum tepidum} (A:)
Probab=34.14 E-value=20 Score=16.11 Aligned_cols=44 Identities=16% Similarity=0.039 Sum_probs=33.0
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHH
Q ss_conf 999999995836589899999999999999975999899972059999
Q gi|254781141|r 81 AENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRL 128 (196)
Q Consensus 81 ~e~~~L~e~iPe~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~D~R~ 128 (196)
.+.+..+..||=| ++.+.+.++-.|+...|++.=.+.-++.+|.
T Consensus 8 ~EA~~~L~kIP~F----vR~kvr~~~E~~Are~G~~~IT~ev~~~Ak~ 51 (63)
T 2kru_A 8 AEAEKMLGKVPFF----VRKKVRKNTDNYAREIGEPVVTADVFRKAKE 51 (63)
T ss_dssp HHHHHHHTTSCHH----HHHHHHHHHHHHHHHHTCSEECHHHHHHHHH
T ss_pred HHHHHHHHHCCHH----HHHHHHHHHHHHHHHCCCCEECHHHHHHHHH
T ss_conf 9999998819887----7999999999999984999776999999999
No 25
>>1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} (A:1-31,A:117-250)
Probab=33.27 E-value=31 Score=14.83 Aligned_cols=60 Identities=15% Similarity=0.202 Sum_probs=43.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 836589899999999999999975999899972059999999999999999974300112
Q gi|254781141|r 90 FPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAY 149 (196)
Q Consensus 90 iPe~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~D~R~i~vl~~Am~y~~~~~~k~~a~ 149 (196)
+++..||.-...++...+.-+...+++++|...|.+--...-.+..-.+.++......+.
T Consensus 73 F~~i~~~~d~k~fK~~yR~~ld~l~l~~~ek~~iI~Ea~~aF~lN~~i~~eL~~~~~~~~ 132 (165)
T 1wov_A 73 FDSLPTPGDRRQFKEIYRDVLNSLPLDEATINRIVEEANYAFSLNREVMHDLEDLIKAAI 132 (165)
T ss_dssp CTTCCSHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 477763657999999999998626799999999999999999999999999999999998
No 26
>>2gf5_A FADD protein; death domain, death effector domain, apoptosis, death- inducing signaling complex; NMR {Homo sapiens} (A:90-191)
Probab=32.51 E-value=17 Score=16.55 Aligned_cols=21 Identities=19% Similarity=0.267 Sum_probs=17.6
Q ss_pred HHHHHHHHHCCCCHHHHHHHC
Q ss_conf 999999997599989997205
Q gi|254781141|r 104 KNLFRIGNILGFQKEEMVDIT 124 (196)
Q Consensus 104 ~~i~~~~~~~Gfs~eEi~~v~ 124 (196)
.+...+|..+||++.||..|.
T Consensus 21 ~~W~~lar~Lg~~~~eI~~i~ 41 (102)
T 2gf5_A 21 KDWRRLARQLKVSDTKIDSIE 41 (102)
T ss_dssp TTHHHHHHHTTCCHHHHHHHH
T ss_pred CHHHHHHHHHCCCHHHHHHHH
T ss_conf 049999999491999999999
No 27
>>1ul1_X Flap endonuclease-1; protein complex, DNA-binding protein, flap DNA, flap endonuclease, sliding clamp, DNA clamp; 2.90A {Homo sapiens} (X:15-217,X:293-379)
Probab=31.83 E-value=9 Score=18.40 Aligned_cols=28 Identities=14% Similarity=0.094 Sum_probs=23.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHH-HCCCCHHHHHHH
Q ss_conf 365898999999999999999-759998999720
Q gi|254781141|r 91 PQTKDPAQRENFFKNLFRIGN-ILGFQKEEMVDI 123 (196)
Q Consensus 91 Pe~~D~~k~~~~~~~i~~~~~-~~Gfs~eEi~~v 123 (196)
=+|+.| -...|++|+. +.|||++-|...
T Consensus 206 ~~~~~~-----~~~~~~~~l~~~~~f~~~rv~~~ 234 (290)
T 1ul1_X 206 LKWSEP-----NEEELIKFMCGEKQFSEERIRSG 234 (290)
T ss_dssp CCCCCC-----CHHHHHHHTTTTSCCCHHHHHHH
T ss_pred CCCCCC-----CHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 677999-----99999999998608999999999
No 28
>>1xk7_A Crotonobetainyl-COA:carnitine COA-transferase; CAIB, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 1.60A {Escherichia coli} (A:1-224,A:370-408)
Probab=31.18 E-value=22 Score=15.78 Aligned_cols=25 Identities=8% Similarity=0.234 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHCCH
Q ss_conf 9999999999759998999720599
Q gi|254781141|r 102 FFKNLFRIGNILGFQKEEMVDITDH 126 (196)
Q Consensus 102 ~~~~i~~~~~~~Gfs~eEi~~v~D~ 126 (196)
+.-+-...++++|||+++|+.+++-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (263)
T 1xk7_A 232 HGXDTAAILKNIGYSENDIQELVSK 256 (263)
T ss_dssp TTTTHHHHHHHTTCCHHHHHHHHHT
T ss_pred CCCCHHHHHHHCCCCHHHHHHHHHC
T ss_conf 9855999999859999999999988
No 29
>>2ztd_A Holliday junction ATP-dependent DNA helicase RUVA; recombination, branch migration, DNA binding, oligomerization, acidic PIN; 2.40A {Mycobacterium tuberculosis} PDB: 2ztc_A 2zte_A 2h5x_A 1bvs_A (A:155-212)
Probab=31.17 E-value=33 Score=14.60 Aligned_cols=27 Identities=19% Similarity=0.159 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHCCH
Q ss_conf 999999999999759998999720599
Q gi|254781141|r 100 ENFFKNLFRIGNILGFQKEEMVDITDH 126 (196)
Q Consensus 100 ~~~~~~i~~~~~~~Gfs~eEi~~v~D~ 126 (196)
.....+...-+..+||++.|...+.+.
T Consensus 7 ~~~~~da~~AL~aLGy~~~ea~~av~~ 33 (58)
T 2ztd_A 7 HAVRSPVVEALVGLGFAAKQAEEATDT 33 (58)
T ss_dssp -CCHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 321689999999759998999999999
No 30
>>1wxp_A THO complex subunit 1; death domain, structural genomics, nuclear matrix, riken structural genomics/proteomics initiative, RSGI, transport protein; NMR {Homo sapiens} (A:)
Probab=30.17 E-value=24 Score=15.52 Aligned_cols=28 Identities=11% Similarity=0.103 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHC
Q ss_conf 9999999999999997599989997205
Q gi|254781141|r 97 AQRENFFKNLFRIGNILGFQKEEMVDIT 124 (196)
Q Consensus 97 ~k~~~~~~~i~~~~~~~Gfs~eEi~~v~ 124 (196)
..+..+..+...+|..+||++.+|..|.
T Consensus 23 ~ia~~l~~~W~~lar~Lgl~~~~i~~I~ 50 (110)
T 1wxp_A 23 VFANKLGEQWKILAPYLEMKDSEIRQIE 50 (110)
T ss_dssp HHHHHHTTTHHHHTTTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 9999998879999999094999999999
No 31
>>1rxw_A Flap structure-specific endonuclease; helical clamp, helix-3 turn-helix, hydrophobic wedge, 3' flap binding site, hydrolase/DNA complex; 2.00A {Archaeoglobus fulgidus} (A:1-220,A:289-336)
Probab=29.20 E-value=31 Score=14.84 Aligned_cols=26 Identities=15% Similarity=0.273 Sum_probs=13.2
Q ss_pred CCCCCHHHHHHHHHHHHHHH-HHCCCCHHHHH
Q ss_conf 36589899999999999999-97599989997
Q gi|254781141|r 91 PQTKDPAQRENFFKNLFRIG-NILGFQKEEMV 121 (196)
Q Consensus 91 Pe~~D~~k~~~~~~~i~~~~-~~~Gfs~eEi~ 121 (196)
=+|++| -..+|.+|+ .+.|||++-|.
T Consensus 222 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 248 (268)
T 1rxw_A 222 IEFREP-----DFEKAIEFLCEEHDFSRERVE 248 (268)
T ss_dssp CCCCCC-----CHHHHHHHHTTTTCCCHHHHH
T ss_pred CCCCCC-----CHHHHHHHHHHHCCCCHHHHH
T ss_conf 666999-----989999999984498999999
No 32
>>1ngr_A P75 low affinity neurotrophin receptor; intracellular domain, death domain; NMR {Rattus norvegicus} (A:)
Probab=28.68 E-value=29 Score=15.03 Aligned_cols=44 Identities=20% Similarity=0.232 Sum_probs=28.3
Q ss_pred CCCCCCHHHHHHH-HHHHHHHHHHCCCCHHHHHHHCC--HHHHHHHH
Q ss_conf 8365898999999-99999999975999899972059--99999999
Q gi|254781141|r 90 FPQTKDPAQRENF-FKNLFRIGNILGFQKEEMVDITD--HRLLSLAY 133 (196)
Q Consensus 90 iPe~~D~~k~~~~-~~~i~~~~~~~Gfs~eEi~~v~D--~R~i~vl~ 133 (196)
+|..-=......+ ..+.+..|..+|||..+|..+.+ +....+|+
T Consensus 7 l~~~~~~~l~~~L~~~dWk~LA~~Lg~~~~~I~~i~~~~~p~~~mL~ 53 (85)
T 1ngr_A 7 LPLTKREEVEKLLNGDTWRHLAGELGYQPEHIDSFTHEACPVRALLA 53 (85)
T ss_dssp SCSTTTHHHHHHSCTTHHHHHHHHTTCCHHHHHHHHHSSCHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCCHHHHHHH
T ss_conf 99999999998868787999998939899999998749986999999
No 33
>>2of5_A Death domain-containing protein cradd; death domain complex, apoptosis; 3.20A {Homo sapiens} (A:)
Probab=28.28 E-value=19 Score=16.27 Aligned_cols=23 Identities=9% Similarity=0.046 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHC
Q ss_conf 99999999997599989997205
Q gi|254781141|r 102 FFKNLFRIGNILGFQKEEMVDIT 124 (196)
Q Consensus 102 ~~~~i~~~~~~~Gfs~eEi~~v~ 124 (196)
+..+...+|..+|||+.+|..|.
T Consensus 34 i~~~W~~la~~Lg~~~~~I~~I~ 56 (114)
T 2of5_A 34 LGPEWEPMVLSLGLSQTDIYRCK 56 (114)
T ss_dssp CCSTHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 74119999999594999999999
No 34
>>1ich_A TNF-1, tumor necrosis factor receptor-1; death domain, apoptosis; NMR {Homo sapiens} (A:)
Probab=27.77 E-value=34 Score=14.50 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=16.5
Q ss_pred HHHHHHHHCCCCHHHHHHH
Q ss_conf 9999999759998999720
Q gi|254781141|r 105 NLFRIGNILGFQKEEMVDI 123 (196)
Q Consensus 105 ~i~~~~~~~Gfs~eEi~~v 123 (196)
+...+|..+|||+.+|..|
T Consensus 27 ~W~~l~r~Lgls~~~i~~I 45 (112)
T 1ich_A 27 RWKEFVKRLGLSDHEIDRL 45 (112)
T ss_dssp THHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHH
T ss_conf 3999999808762023377
No 35
>>1ixr_A Holliday junction DNA helicase RUVA; heterooligomeric complex, octameric RUVA, AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ANP; 3.30A {Thermus thermophilus} (A:)
Probab=26.01 E-value=16 Score=16.64 Aligned_cols=42 Identities=12% Similarity=0.099 Sum_probs=29.1
Q ss_pred HHHHHCCCCCCHH--HHHHHHHHHHHHHHHCCCCHHHHHHHCCH
Q ss_conf 9999583658989--99999999999999759998999720599
Q gi|254781141|r 85 QLEHLFPQTKDPA--QRENFFKNLFRIGNILGFQKEEMVDITDH 126 (196)
Q Consensus 85 ~L~e~iPe~~D~~--k~~~~~~~i~~~~~~~Gfs~eEi~~v~D~ 126 (196)
.|..+++.|..+. .......++...+.++||+..|+..+.+.
T Consensus 126 eLk~k~~~~~~~~~~~~~~~~~e~~~aL~~LGy~~~ea~~ai~~ 169 (191)
T 1ixr_A 126 ELKGKVPPHLLAGEKVESEAAEEAVMALAALGFKEAQARAVVLD 169 (191)
T ss_dssp HHTTTSCSCC----------------------------------
T ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 99864252100112335556899999999869999999999999
No 36
>>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} (B:)
Probab=25.91 E-value=41 Score=14.00 Aligned_cols=21 Identities=14% Similarity=0.107 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHCCCCHHHHH
Q ss_conf 999999999997599989997
Q gi|254781141|r 101 NFFKNLFRIGNILGFQKEEMV 121 (196)
Q Consensus 101 ~~~~~i~~~~~~~Gfs~eEi~ 121 (196)
.+|.+++--+...|.|++||.
T Consensus 13 ~EWveLi~eA~eagis~eeiR 33 (57)
T 1b0n_B 13 QEWVELMVEAKEANISPEEIR 33 (57)
T ss_dssp HHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHH
T ss_conf 999999999999499999999
No 37
>>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease beta-lactamase, cilastatin, complex (hydrolase/inhibitor); HET: NAG CIL; 2.00A {Homo sapiens} (A:)
Probab=25.67 E-value=41 Score=13.98 Aligned_cols=45 Identities=11% Similarity=0.034 Sum_probs=35.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 6589899999999999999975999899972059999999999999999
Q gi|254781141|r 92 QTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQ 140 (196)
Q Consensus 92 e~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~D~R~i~vl~~Am~y~~ 140 (196)
.|.|+ ....+|...+...|||+++|..|.--..+.++...+.+.+
T Consensus 298 gl~~~----~~~p~l~~~L~~rG~s~~~i~ki~g~N~~Rvl~~~~~~~~ 342 (369)
T 1itu_A 298 GLEDV----SKYPDLIAELLRRNWTEAEVKGALADNLLRVFEAVEQASN 342 (369)
T ss_dssp TCSST----TCHHHHHHHHHHTTCCHHHHHHHHTHHHHHHHHHHHHHCC
T ss_pred CCCCH----HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87787----7889999999986999999999998879999999999998
No 38
>>3eus_A DNA-binding protein; structural genomics, PSI2,MCSG, protein structure initiative, midwest center for structural genomics; 1.80A {Silicibacter pomeroyi} (A:)
Probab=25.29 E-value=42 Score=13.93 Aligned_cols=37 Identities=11% Similarity=0.150 Sum_probs=32.4
Q ss_pred HCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
Q ss_conf 5836589899999999999999975999899972059
Q gi|254781141|r 89 LFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITD 125 (196)
Q Consensus 89 ~iPe~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~D 125 (196)
.||..........+...|+.+-...|+|..+++...+
T Consensus 2 ~M~~~~~~~~~~~~g~~lk~~R~~~gltq~~lA~~~g 38 (86)
T 3eus_A 2 AMTKTLRTPEHVYLCQRLRQARLDAGLTQADLAERLD 38 (86)
T ss_dssp GGGGGSCSHHHHHHHHHHHHHHHHTTCCHHHHHHHTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
T ss_conf 9887889979999999999999984999999999979
No 39
>>1ugp_A NitrIle hydratase alpha subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} (A:50-203)
Probab=25.23 E-value=40 Score=14.07 Aligned_cols=25 Identities=16% Similarity=0.213 Sum_probs=17.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 6589899999999999999975999
Q gi|254781141|r 92 QTKDPAQRENFFKNLFRIGNILGFQ 116 (196)
Q Consensus 92 e~~D~~k~~~~~~~i~~~~~~~Gfs 116 (196)
-|.||+.++.+..+-.....++||+
T Consensus 12 AW~Dp~Fk~~LL~D~~aA~~elG~~ 36 (154)
T 1ugp_A 12 AWTDPEFKKRLLADGTEACKELGIG 36 (154)
T ss_dssp HHHCHHHHHHHHHCHHHHHHTTTCC
T ss_pred HHCCHHHHHHHHHCHHHHHHHCCCC
T ss_conf 8379999999998889999984998
No 40
>>3b9e_A Chitinase A; TIM-barrel, glycosidase, hydrolase; 1.70A {Vibrio harveyi} PDB: 3b9a_A* 3b9d_A 3b8s_A (A:126-438,A:527-584)
Probab=25.01 E-value=42 Score=13.90 Aligned_cols=31 Identities=16% Similarity=0.293 Sum_probs=24.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCC-CHHHH
Q ss_conf 83658989999999999999997599-98999
Q gi|254781141|r 90 FPQTKDPAQRENFFKNLFRIGNILGF-QKEEM 120 (196)
Q Consensus 90 iPe~~D~~k~~~~~~~i~~~~~~~Gf-s~eEi 120 (196)
++...|++.++.|..+|++++..||| .-=+|
T Consensus 135 ~~~~~~~~~R~~Fv~svv~fl~~y~f~DGIDI 166 (371)
T 3b9e_A 135 FYDFVDKKNRDTFVASVKKFLKTWKFYDGVDI 166 (371)
T ss_dssp GGGTTSHHHHHHHHHHHHHHHHHSTTCCEEEE
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 55662989999999999999997499775478
No 41
>>2zpb_A NitrIle hydratase subunit alpha; lyase, iron, metal-binding, oxidation; 1.30A {Rhodococcus erythropolis} PDB: 2ahj_A 2cyz_A 2cz6_A 2cz7_A 2d0q_A 2cz1_A 2zpe_A 2zpf_A 2zpg_A 2zph_A 2zpi_A 2zcf_A 2qdy_A 2cz0_A* 1ahj_A (A:52-206)
Probab=24.04 E-value=44 Score=13.78 Aligned_cols=26 Identities=15% Similarity=0.147 Sum_probs=21.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 65898999999999999999759998
Q gi|254781141|r 92 QTKDPAQRENFFKNLFRIGNILGFQK 117 (196)
Q Consensus 92 e~~D~~k~~~~~~~i~~~~~~~Gfs~ 117 (196)
-|.||+.++.+..+-.....++||+-
T Consensus 12 AW~Dp~Fk~~LL~D~~aA~~elG~~~ 37 (155)
T 2zpb_A 12 AWTDPEFRQLLLTDGTAAVAQYGYLG 37 (155)
T ss_dssp HHHCHHHHHHHHHCHHHHHHHTTCCB
T ss_pred HHCCHHHHHHHHHCHHHHHHHCCCCC
T ss_conf 83799999999988899999849887
No 42
>>2h9d_A Salicylate biosynthesis protein PCHB; intertwined dimer, lyase; 1.95A {Pseudomonas aeruginosa PAO1} (A:)
Probab=23.65 E-value=45 Score=13.73 Aligned_cols=45 Identities=7% Similarity=0.049 Sum_probs=33.1
Q ss_pred HHHHHHHHHCCC-------CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
Q ss_conf 999999995836-------589899999999999999975999899972059
Q gi|254781141|r 81 AENQQLEHLFPQ-------TKDPAQRENFFKNLFRIGNILGFQKEEMVDITD 125 (196)
Q Consensus 81 ~e~~~L~e~iPe-------~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~D 125 (196)
.++..+...|=. .-||+.-......+.+.+.++||+++.|..++.
T Consensus 29 ~~R~~~~~~i~~~K~~~~~i~d~~Re~~vl~~~~~~a~~~~l~~~~i~~i~~ 80 (101)
T 2h9d_A 29 GRRMDYVKAASRFKASEAAIPAPERVAAMLPERARWAEENGLDAPFVEGLFA 80 (101)
T ss_dssp HHHHHHHHHTTTC----------CHHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 9999999999999755767788789999999999987657969999999999
No 43
>>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein structure initiative, PSI-2; 2.20A {Bacillus subtilis subsp} (A:1-223,A:285-319)
Probab=23.37 E-value=45 Score=13.69 Aligned_cols=28 Identities=18% Similarity=0.478 Sum_probs=23.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 5898999999999999999759998999
Q gi|254781141|r 93 TKDPAQRENFFKNLFRIGNILGFQKEEM 120 (196)
Q Consensus 93 ~~D~~k~~~~~~~i~~~~~~~Gfs~eEi 120 (196)
.+|+..+..|..+|..++..+||.-=+|
T Consensus 90 l~d~~~r~~fi~siv~~~~~ygfDGIdi 117 (258)
T 3cz8_A 90 LNNPTARTNLVNNIYDLVSTRGYGGVTI 117 (258)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HCCHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 6799999999999999999969984999
No 44
>>3hht_A NitrIle hydratase alpha subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} PDB: 2dpp_A 1v29_A (A:59-216)
Probab=22.61 E-value=33 Score=14.65 Aligned_cols=24 Identities=21% Similarity=0.347 Sum_probs=11.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 589899999999999999975999
Q gi|254781141|r 93 TKDPAQRENFFKNLFRIGNILGFQ 116 (196)
Q Consensus 93 ~~D~~k~~~~~~~i~~~~~~~Gfs 116 (196)
|.||+.++.+..+-.....++||+
T Consensus 13 W~Dp~Fk~~LL~D~~aA~~elG~~ 36 (158)
T 3hht_A 13 WTDPAFKQRLLEDSETVLRELGYY 36 (158)
T ss_dssp HHCHHHHHHHHHCHHHHHHHHTCC
T ss_pred HCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 569899999997789999984998
No 45
>>1ji6_A Pesticidial crystal protein CRY3BB; toxin; 2.40A {Bacillus thuringiensis} (A:126-221)
Probab=22.37 E-value=31 Score=14.80 Aligned_cols=25 Identities=16% Similarity=0.421 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHCCH
Q ss_conf 9999999999759998999720599
Q gi|254781141|r 102 FFKNLFRIGNILGFQKEEMVDITDH 126 (196)
Q Consensus 102 ~~~~i~~~~~~~Gfs~eEi~~v~D~ 126 (196)
+-.+...||..+|||+.+++..++.
T Consensus 20 lLrd~i~~g~~Wg~~~~~~~~~~~~ 44 (96)
T 1ji6_A 20 LLKDAQVFGEEWGYSSEDVAEFYHR 44 (96)
T ss_dssp HHTHHHHHTTTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 9999998636509997899999999
No 46
>>3bxw_B Chitinase domain-containing protein 1; TIM barrel, alternative splicing, lysosome, polymorphism, secreted, hydrolase; 2.70A {Homo sapiens} (B:72-301,B:359-393)
Probab=22.06 E-value=48 Score=13.52 Aligned_cols=28 Identities=11% Similarity=0.124 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 5898999999999999999759998999
Q gi|254781141|r 93 TKDPAQRENFFKNLFRIGNILGFQKEEM 120 (196)
Q Consensus 93 ~~D~~k~~~~~~~i~~~~~~~Gfs~eEi 120 (196)
+.|+..+.++..+|.+++..+||.-=+|
T Consensus 93 ~~~~~~r~~fi~~iv~~l~~~gfDGIdI 120 (265)
T 3bxw_B 93 LDSEDEIEELSKTVVQVAKNQHFDGFVV 120 (265)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HCCHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 6799999999999999999839984799
No 47
>>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} (A:1-244,A:318-377)
Probab=21.40 E-value=50 Score=13.44 Aligned_cols=28 Identities=18% Similarity=0.392 Sum_probs=24.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 5898999999999999999759998999
Q gi|254781141|r 93 TKDPAQRENFFKNLFRIGNILGFQKEEM 120 (196)
Q Consensus 93 ~~D~~k~~~~~~~i~~~~~~~Gfs~eEi 120 (196)
.+|+..++.|..++.+++..+||.-=+|
T Consensus 89 ~~~~~~R~~Fi~svv~~l~~~gfDGiDi 116 (304)
T 1vf8_A 89 VSTPQNRQIFIQSVIRFLRQYNFDGLNL 116 (304)
T ss_dssp HTSHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HCCHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 3389999999999999999759982313
No 48
>>1a76_A Flap endonuclease-1 protein; 5'-3' EXO/endo nuclease, DNA replication, RTH, RAD27, DNA repair; 2.00A {Methanococcus jannaschii} (A:1-209,A:275-326)
Probab=21.28 E-value=50 Score=13.42 Aligned_cols=29 Identities=10% Similarity=-0.036 Sum_probs=23.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHHH-HCCCCHHHHHHH
Q ss_conf 8365898999999999999999-759998999720
Q gi|254781141|r 90 FPQTKDPAQRENFFKNLFRIGN-ILGFQKEEMVDI 123 (196)
Q Consensus 90 iPe~~D~~k~~~~~~~i~~~~~-~~Gfs~eEi~~v 123 (196)
--+|++| -...|.+|+. +.|||++-|.+.
T Consensus 210 ~~~~~~~-----~~~~~~~~~~~~~~f~~~r~~~~ 239 (261)
T 1a76_A 210 SLSLKLP-----DKEGIIKFLVDENDFNYDRVKKH 239 (261)
T ss_dssp CCCCCCC-----CHHHHHHHHTTTTCCCHHHHHHH
T ss_pred CCCCCCC-----CHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 0135899-----98999999998749999999999
No 49
>>2ou3_A Tellurite resistance protein of COG3793; ZP_00109916.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE I3A; 1.85A {Nostoc punctiforme pcc 73102} (A:22-161)
Probab=21.07 E-value=41 Score=13.96 Aligned_cols=34 Identities=18% Similarity=0.255 Sum_probs=26.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
Q ss_conf 6589899999999999999975999899972059
Q gi|254781141|r 92 QTKDPAQRENFFKNLFRIGNILGFQKEEMVDITD 125 (196)
Q Consensus 92 e~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~~v~D 125 (196)
-|.|-.....+..-|..++..+|++++++..+.+
T Consensus 84 a~aDG~~~~~E~~~i~~~a~~Lgi~~~~~~~l~~ 117 (140)
T 2ou3_A 84 SAADGELHEKEKAKIRKXATILGIKEEIVDQLEQ 117 (140)
T ss_dssp HHTTSSCCHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 9937877999999999999993999999999999
No 50
>>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} (A:1-304,A:380-419)
Probab=20.92 E-value=51 Score=13.37 Aligned_cols=29 Identities=17% Similarity=0.194 Sum_probs=24.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 58989999999999999997599989997
Q gi|254781141|r 93 TKDPAQRENFFKNLFRIGNILGFQKEEMV 121 (196)
Q Consensus 93 ~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~ 121 (196)
..|++.++.|..+++.++..+||.-=+|.
T Consensus 142 ~~~~~~R~~Fv~svv~~l~~ygfDGIDiD 170 (344)
T 1itx_A 142 AATAATREVFANSAVDFLRKYNFDGVDLD 170 (344)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 48999999999999999998389862022
No 51
>>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase- bromide complex; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} (C:105-185,C:404-466)
Probab=20.86 E-value=51 Score=13.36 Aligned_cols=53 Identities=13% Similarity=-0.009 Sum_probs=33.9
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHH---------HHHHHHCCCCHHHHHHHCCHHHHHHHHH
Q ss_conf 9999999583658989999999999---------9999975999899972059999999999
Q gi|254781141|r 82 ENQQLEHLFPQTKDPAQRENFFKNL---------FRIGNILGFQKEEMVDITDHRLLSLAYY 134 (196)
Q Consensus 82 e~~~L~e~iPe~~D~~k~~~~~~~i---------~~~~~~~Gfs~eEi~~v~D~R~i~vl~~ 134 (196)
=...|....|.|.|+..-..-+.=+ .+|++.-.||++.+..|--..+=.|+=|
T Consensus 44 ia~~L~~~np~w~de~lFqeAR~iv~a~~Q~I~~~e~L~pg~Ft~~QL~eIrk~sLariiCd 105 (144)
T 1d2v_C 44 LATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLNEGVFSMQQRQALAQISLPRIICD 105 (144)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTTHSTTTSCHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHC
T ss_conf 99999975899987899999999999998571399878799899999999996689998760
No 52
>>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} (B:101-140)
Probab=20.60 E-value=51 Score=13.33 Aligned_cols=19 Identities=26% Similarity=0.331 Sum_probs=12.3
Q ss_pred HHHHHHHCC--CCHHHHHHHC
Q ss_conf 999999759--9989997205
Q gi|254781141|r 106 LFRIGNILG--FQKEEMVDIT 124 (196)
Q Consensus 106 i~~~~~~~G--fs~eEi~~v~ 124 (196)
|++-+.+.| ||++||..++
T Consensus 9 lreLL~tmgDrFt~eEVdem~ 29 (40)
T 1wdc_B 9 IKDLLENMGDNFNKDEMRMTF 29 (40)
T ss_dssp HHHHHHHSSSCCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHH
T ss_conf 999999808999999999999
No 53
>>1br2_A Myosin; muscle protein; HET: ADP; 2.90A {Gallus gallus} (A:280-453)
Probab=20.58 E-value=52 Score=13.32 Aligned_cols=28 Identities=25% Similarity=0.481 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHCCH
Q ss_conf 9999999999999759998999720599
Q gi|254781141|r 99 RENFFKNLFRIGNILGFQKEEMVDITDH 126 (196)
Q Consensus 99 ~~~~~~~i~~~~~~~Gfs~eEi~~v~D~ 126 (196)
..+.+..++.-...+||+++|+.+|.+-
T Consensus 48 d~~~f~~~~~al~~lg~~~~e~~~i~~v 75 (174)
T 1br2_A 48 DDEMFQETLEAMTIMGFTEEEQTSILRV 75 (174)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 7999999999887739889999999999
No 54
>>1wb0_A Chitinase 1, chitotriosidase 1; hydrolase, human chitinase, argadin, cyclopentapeptide inhibitors, chitinase inhibitors, alternative splicing; HET: RAG; 1.65A {Homo sapiens} (A:1-244,A:316-445)
Probab=20.06 E-value=53 Score=13.25 Aligned_cols=29 Identities=14% Similarity=0.258 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 58989999999999999997599989997
Q gi|254781141|r 93 TKDPAQRENFFKNLFRIGNILGFQKEEMV 121 (196)
Q Consensus 93 ~~D~~k~~~~~~~i~~~~~~~Gfs~eEi~ 121 (196)
.+|++.++.|..++.+++..|||.-=+|+
T Consensus 89 ~~~~~~r~~Fi~siv~~l~~y~fDGiDiD 117 (374)
T 1wb0_A 89 VATANNRQTFVNSAIRFLRKYSFDGLDLD 117 (374)
T ss_dssp HTSHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HCCHHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 66999999999999999997699838521
Done!