BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781141|ref|YP_003065554.1| hypothetical protein
CLIBASIA_05225 [Candidatus Liberibacter asiaticus str. psy62]
         (196 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254781141|ref|YP_003065554.1| hypothetical protein CLIBASIA_05225 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040818|gb|ACT57614.1| hypothetical protein CLIBASIA_05225 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 196

 Score =  401 bits (1031), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/196 (100%), Positives = 196/196 (100%)

Query: 1   MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
           MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG
Sbjct: 1   MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60

Query: 61  RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
           RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM
Sbjct: 61  RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120

Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180
           VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK
Sbjct: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180

Query: 181 LYQTGSLYDSLEIDFV 196
           LYQTGSLYDSLEIDFV
Sbjct: 181 LYQTGSLYDSLEIDFV 196


>gi|315122534|ref|YP_004063023.1| hypothetical protein CKC_03930 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495936|gb|ADR52535.1| hypothetical protein CKC_03930 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 328

 Score =  262 bits (670), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 130/198 (65%), Positives = 160/198 (80%), Gaps = 2/198 (1%)

Query: 1   MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
           +Q QAKILA SA++LAQLINHH+P D  P+L +T P  Y  I  LRQ+ALNIINHFVE G
Sbjct: 131 VQKQAKILAHSADSLAQLINHHMPADPHPSLAQTDPSAYQNIINLRQQALNIINHFVEEG 190

Query: 61  RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
           R PD IAKELD+E +E KL  EN+QLE++FPQTKDPAQRE+FF+N+F+IG  +GFQ+EEM
Sbjct: 191 RYPDKIAKELDAEHVEIKLKNENEQLENIFPQTKDPAQRESFFQNIFKIGKKIGFQEEEM 250

Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAK--NHRRITSQEKAI 178
            +I DHRLL LA+YAQ+GLQSQK+SED Y KIRHKP  +   N+ K  NH RITSQ++AI
Sbjct: 251 KNIIDHRLLVLAHYAQLGLQSQKISEDVYRKIRHKPSGSSVPNRKKSCNHHRITSQQRAI 310

Query: 179 QKLYQTGSLYDSLEIDFV 196
           QKL ++GS YD+L+IDFV
Sbjct: 311 QKLQKSGSFYDALDIDFV 328


>gi|227822442|ref|YP_002826414.1| hypothetical protein NGR_c18970 [Sinorhizobium fredii NGR234]
 gi|227341443|gb|ACP25661.1| hypothetical protein NGR_c18970 [Sinorhizobium fredii NGR234]
          Length = 317

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 3/197 (1%)

Query: 1   MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
           +++ +  +A +A A+A+LI+  IP D    L    PETY R   L Q  L  +   +  G
Sbjct: 121 LESMSSRVAVTANAVAELISAQIPPDPPEELRLHDPETYQRQWALHQAGLKQLLRVMALG 180

Query: 61  RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
             P  IA  L     E++L+ EN +L   FPQT     R+ FF + F     LGF  EE+
Sbjct: 181 EEPAGIAGALQDAASEERLVGENAKLLEAFPQTGQDEGRQAFFADAFEAARELGFTDEEI 240

Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN--HRRITSQEKAI 178
            ++ DHRL  LA+YA++GL +++    A  K+   P     T KAKN   R+     +A+
Sbjct: 241 REVVDHRLFKLAHYARLGLLAKRARAKALQKVAVAPAAAPRT-KAKNQAQRQQRESREAM 299

Query: 179 QKLYQTGSLYDSLEIDF 195
           ++L ++GS+ D++ +DF
Sbjct: 300 RRLARSGSIRDAMAVDF 316


>gi|150397034|ref|YP_001327501.1| hypothetical protein Smed_1831 [Sinorhizobium medicae WSM419]
 gi|150028549|gb|ABR60666.1| hypothetical protein Smed_1831 [Sinorhizobium medicae WSM419]
          Length = 322

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 1/189 (0%)

Query: 8   LAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIA 67
           +A +A A+A+ +   +P + +  L    P  Y R + +   AL  +   ++    P  + 
Sbjct: 133 VATTANAIAEFLIQQLPAEPTRMLAIQNPAEYTRQKSVYDGALEQVQRLIDVSAEPKRVG 192

Query: 68  KELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHR 127
            EL     ++ L AEN +L   FP+      RE FF   F+ G   GF ++EM   TDHR
Sbjct: 193 DELKQAATQETLAAENAKLLEAFPRLAREDARERFFAEAFKAGEDFGFSQDEMQGFTDHR 252

Query: 128 LLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTN-KAKNHRRITSQEKAIQKLYQTGS 186
              + +YA +G ++++    A  K+ + P     +  K   + +    + A+++L +TGS
Sbjct: 253 YFKVMHYAMLGFRAEQAKSKALTKVANAPPATAKSKPKGPANPQARKNQDAMKRLAKTGS 312

Query: 187 LYDSLEIDF 195
           + D+L IDF
Sbjct: 313 IKDALLIDF 321


>gi|316973122|gb|EFV56749.1| putative von Willebrand factor type D domain protein [Trichinella
           spiralis]
          Length = 1122

 Score = 37.4 bits (85), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 9/79 (11%)

Query: 41  RIRYLRQKALNIINHFVETGRNPDN-------IAKELDSEILEKKLIAENQQLEHLFPQ- 92
           R R LR+  L  + +F   GR+ D        +AK+  SE+   KL+ ++++  HL  Q 
Sbjct: 64  RSRLLRESLLKELEYFRNLGRDYDKQRAEQMEMAKKYRSEVESAKLLRKHREQCHLMAQL 123

Query: 93  -TKDPAQRENFFKNLFRIG 110
             + P + E  +KNL++ G
Sbjct: 124 INQYPTREEKEWKNLYQYG 142


>gi|332291500|ref|YP_004430109.1| 2-oxoglutarate dehydrogenase, E1 subunit [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332169586|gb|AEE18841.1| 2-oxoglutarate dehydrogenase, E1 subunit [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 938

 Score = 36.2 bits (82), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 30/159 (18%)

Query: 58  ETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNL----------- 106
           ++G  P  I + +  E    KLI   +   HLF +T    +R  +   L           
Sbjct: 76  DSGTTPAAIPEAIQKEFQIVKLIDAYRNRGHLFTKTNPVRERRKYAPTLEIENFGLSQAD 135

Query: 107 ----FRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHK---PFVN 159
               F  G+ILG  +  + +I +H  L   Y   IG++        Y  IR+     ++ 
Sbjct: 136 MTLQFEAGSILGLGRTSLREIVNH--LEAIYCDHIGIE--------YMYIRNPEEIAWIQ 185

Query: 160 ITTNKAKNHRRITSQEKA--IQKLYQTGSLYDSLEIDFV 196
              NK  NH   +++EK   ++KL QT S    L   +V
Sbjct: 186 NWLNKNDNHPEFSAEEKKHILKKLNQTASFEGFLHSKYV 224


>gi|303275620|ref|XP_003057104.1| flagellar inner arm heavy dynein chain [Micromonas pusilla CCMP1545]
 gi|226461456|gb|EEH58749.1| flagellar inner arm heavy dynein chain [Micromonas pusilla CCMP1545]
          Length = 4323

 Score = 35.4 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 8/61 (13%)

Query: 64   DNIAKELDSEILEKKLIA-------ENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQ 116
            D + K L SE LE K +A        N +L  +  +TKDP + + F K +F   N+L FQ
Sbjct: 1299 DEVNKGL-SEYLETKRLAFPRFYFLSNDELLEILSETKDPLRVQPFLKKVFEAINLLEFQ 1357

Query: 117  K 117
            K
Sbjct: 1358 K 1358


>gi|115624707|ref|XP_001203566.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115633855|ref|XP_001199961.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 359

 Score = 35.4 bits (80), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 25  DDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQ 84
           DD S ++ +T+P T  R+R      +        T R PDNI + L  E L K++  EN+
Sbjct: 182 DDESKSMRETFPPTTRRVRKTPSPGIQPGQRAFPTDRIPDNI-RFLHGEELCKEVAKENE 240

Query: 85  QLEHLFPQTK 94
            L    P  K
Sbjct: 241 FLRKATPPPK 250


>gi|332828553|gb|EGK01253.1| hypothetical protein HMPREF9455_02445 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 759

 Score = 35.4 bits (80), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 26/54 (48%)

Query: 8   LAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
           L   A  L  L N   PD S   ++K YPE Y  IR      LN I++F+E  R
Sbjct: 580 LPNRAAILDTLTNAVYPDKSEEAIKKMYPEDYRIIRDEIYPNLNRIDYFIELCR 633


>gi|301629922|ref|XP_002944081.1| PREDICTED: piggyBac transposable element-derived protein 4-like
           [Xenopus (Silurana) tropicalis]
          Length = 385

 Score = 35.4 bits (80), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%)

Query: 26  DSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN--PDNIAKELDSEILEKK--LIA 81
           ++SP L K  P      R      +N++  F++ GRN   DN    L   +L+ K  L+ 
Sbjct: 120 NASPYLGKD-PSRQKGERLAENVVMNLMEPFLDEGRNVTTDNFFTSLSHRLLQHKTTLLG 178

Query: 82  ENQQLEHLFPQ-TKDPAQRENFFKNLFRIGNI 112
              ++    PQ  KD AQRE F  ++ R G++
Sbjct: 179 TVNKVRRELPQLAKDTAQREVFSTSVLRSGSV 210


>gi|154248928|ref|YP_001409753.1| UDP-N-acetylglucosamine 2-epimerase [Fervidobacterium nodosum
           Rt17-B1]
 gi|154152864|gb|ABS60096.1| UDP-N-acetylglucosamine 2-epimerase [Fervidobacterium nodosum
           Rt17-B1]
          Length = 355

 Score = 34.7 bits (78), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 34/62 (54%)

Query: 45  LRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFK 104
           +R+K +N  N+FV T    +NI + + + +   +  +E Q +E +FP  K+P  RE  + 
Sbjct: 188 IRKKIINHTNYFVVTLHRRENIGQRMRNILRAIRKFSEEQNIEFVFPVHKNPKVREIVYS 247

Query: 105 NL 106
            L
Sbjct: 248 EL 249


>gi|148377320|ref|YP_001256196.1| putative deoxyribonuclease (YabD) deoxyribonuclease (TatD)
           [Mycoplasma agalactiae PG2]
 gi|148291366|emb|CAL58749.1| Conserved Hypothetical protein Putativedeoxyribonuclease (YabD)
           Deoxyribonuclease (TatD) [Mycoplasma agalactiae PG2]
          Length = 253

 Score = 34.7 bits (78), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 9/64 (14%)

Query: 48  KALNIINHFVET----GRNPDNIAKELDSEILE----KKLIAENQ-QLEHLFPQTKDPAQ 98
           + LNI +HF  T    G +P+N    +D EI+E    K ++A  +  L++ +P TK   Q
Sbjct: 47  EVLNICSHFDYTFPVIGVHPNNSTGAIDGEIVESQLTKDVVAIGEIGLDYHYPDTKKDVQ 106

Query: 99  RENF 102
           +E+F
Sbjct: 107 KESF 110


Searching..................................................done


Results from round 2




>gi|254781141|ref|YP_003065554.1| hypothetical protein CLIBASIA_05225 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040818|gb|ACT57614.1| hypothetical protein CLIBASIA_05225 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 196

 Score =  281 bits (718), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 196/196 (100%), Positives = 196/196 (100%)

Query: 1   MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
           MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG
Sbjct: 1   MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60

Query: 61  RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
           RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM
Sbjct: 61  RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120

Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180
           VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK
Sbjct: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180

Query: 181 LYQTGSLYDSLEIDFV 196
           LYQTGSLYDSLEIDFV
Sbjct: 181 LYQTGSLYDSLEIDFV 196


>gi|315122534|ref|YP_004063023.1| hypothetical protein CKC_03930 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495936|gb|ADR52535.1| hypothetical protein CKC_03930 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 328

 Score =  270 bits (689), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 130/198 (65%), Positives = 160/198 (80%), Gaps = 2/198 (1%)

Query: 1   MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
           +Q QAKILA SA++LAQLINHH+P D  P+L +T P  Y  I  LRQ+ALNIINHFVE G
Sbjct: 131 VQKQAKILAHSADSLAQLINHHMPADPHPSLAQTDPSAYQNIINLRQQALNIINHFVEEG 190

Query: 61  RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
           R PD IAKELD+E +E KL  EN+QLE++FPQTKDPAQRE+FF+N+F+IG  +GFQ+EEM
Sbjct: 191 RYPDKIAKELDAEHVEIKLKNENEQLENIFPQTKDPAQRESFFQNIFKIGKKIGFQEEEM 250

Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAK--NHRRITSQEKAI 178
            +I DHRLL LA+YAQ+GLQSQK+SED Y KIRHKP  +   N+ K  NH RITSQ++AI
Sbjct: 251 KNIIDHRLLVLAHYAQLGLQSQKISEDVYRKIRHKPSGSSVPNRKKSCNHHRITSQQRAI 310

Query: 179 QKLYQTGSLYDSLEIDFV 196
           QKL ++GS YD+L+IDFV
Sbjct: 311 QKLQKSGSFYDALDIDFV 328


>gi|150397034|ref|YP_001327501.1| hypothetical protein Smed_1831 [Sinorhizobium medicae WSM419]
 gi|150028549|gb|ABR60666.1| hypothetical protein Smed_1831 [Sinorhizobium medicae WSM419]
          Length = 322

 Score =  251 bits (640), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 1/196 (0%)

Query: 1   MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
           ++     +A +A A+A+ +   +P + +  L    P  Y R + +   AL  +   ++  
Sbjct: 126 LETMTTRVATTANAIAEFLIQQLPAEPTRMLAIQNPAEYTRQKSVYDGALEQVQRLIDVS 185

Query: 61  RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
             P  +  EL     ++ L AEN +L   FP+      RE FF   F+ G   GF ++EM
Sbjct: 186 AEPKRVGDELKQAATQETLAAENAKLLEAFPRLAREDARERFFAEAFKAGEDFGFSQDEM 245

Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTN-KAKNHRRITSQEKAIQ 179
              TDHR   + +YA +G ++++    A  K+ + P     +  K   + +    + A++
Sbjct: 246 QGFTDHRYFKVMHYAMLGFRAEQAKSKALTKVANAPPATAKSKPKGPANPQARKNQDAMK 305

Query: 180 KLYQTGSLYDSLEIDF 195
           +L +TGS+ D+L IDF
Sbjct: 306 RLAKTGSIKDALLIDF 321


>gi|227822442|ref|YP_002826414.1| hypothetical protein NGR_c18970 [Sinorhizobium fredii NGR234]
 gi|227341443|gb|ACP25661.1| hypothetical protein NGR_c18970 [Sinorhizobium fredii NGR234]
          Length = 317

 Score =  221 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 1/196 (0%)

Query: 1   MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
           +++ +  +A +A A+A+LI+  IP D    L    PETY R   L Q  L  +   +  G
Sbjct: 121 LESMSSRVAVTANAVAELISAQIPPDPPEELRLHDPETYQRQWALHQAGLKQLLRVMALG 180

Query: 61  RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
             P  IA  L     E++L+ EN +L   FPQT     R+ FF + F     LGF  EE+
Sbjct: 181 EEPAGIAGALQDAASEERLVGENAKLLEAFPQTGQDEGRQAFFADAFEAARELGFTDEEI 240

Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTN-KAKNHRRITSQEKAIQ 179
            ++ DHRL  LA+YA++GL +++    A  K+   P     T  K +  R+     +A++
Sbjct: 241 REVVDHRLFKLAHYARLGLLAKRARAKALQKVAVAPAAAPRTKAKNQAQRQQRESREAMR 300

Query: 180 KLYQTGSLYDSLEIDF 195
           +L ++GS+ D++ +DF
Sbjct: 301 RLARSGSIRDAMAVDF 316


>gi|283856245|ref|YP_162118.2| hypothetical protein ZMO0383 [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775240|gb|AAV89007.2| hypothetical protein ZMO0383 [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 283

 Score = 49.8 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 11/190 (5%)

Query: 10  QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKE 69
             A+ LA+      P    P L  + P +Y       +      +  V+         + 
Sbjct: 87  HYADQLAKYAEAITPKKPDPQLLVSDPASYAAQLASYEDLTAKRDQIVQEVIQISRQNEM 146

Query: 70  LDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLL 129
            +          E+Q+L  L P+  D  QR          G  LG+    + +   + ++
Sbjct: 147 AELAARRAWAQGEHQRLISLLPEWGDDNQRPAILAAFEETGRHLGYPDHVLAEADSNDIM 206

Query: 130 SLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR---------RITSQEKAIQK 180
           +L    +   +S+K   DA  + +     +  T++              +     +++ +
Sbjct: 207 ALKKAHEWRRKSEKW--DALQQGKAAAIKSAKTSRKTAVPGTSQPYGAAKSRKLNESLGQ 264

Query: 181 LYQTGSLYDS 190
           L +TG +  +
Sbjct: 265 LRETGDVRSA 274


>gi|241760936|ref|ZP_04759025.1| hypothetical protein ZmobDRAFT_0101 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753096|ref|YP_003225989.1| hypothetical protein Za10_0859 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|241374555|gb|EER64016.1| hypothetical protein ZmobDRAFT_0101 [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552459|gb|ACV75405.1| hypothetical protein Za10_0859 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 283

 Score = 49.8 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 11/190 (5%)

Query: 10  QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKE 69
             A+ LA+      P    P L  + P +Y       +      +  V+         + 
Sbjct: 87  HYADQLAKYAEAITPKKPDPQLLVSDPASYAAQLASYEDLTAKRDQIVQEVIQISRQNEM 146

Query: 70  LDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLL 129
            +          E+Q+L  L P+  D  QR          G  LG+    + +   + ++
Sbjct: 147 AELAARRAWAQGEHQRLISLLPEWGDDNQRPAILAAFEETGRHLGYPDHVLAEADSNDIM 206

Query: 130 SLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR---------RITSQEKAIQK 180
           +L    +   +S+K   DA  + +     +  T++              +     +++ +
Sbjct: 207 ALKKAHEWRRKSEKW--DALQQGKAAAIKSAKTSRKTAVPGTSQPYGAAKSRKLNESLGQ 264

Query: 181 LYQTGSLYDS 190
           L +TG +  +
Sbjct: 265 LRETGDVRSA 274


>gi|160897388|ref|YP_001562970.1| hypothetical protein Daci_1945 [Delftia acidovorans SPH-1]
 gi|160362972|gb|ABX34585.1| hypothetical protein Daci_1945 [Delftia acidovorans SPH-1]
          Length = 311

 Score = 46.7 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 63/163 (38%), Gaps = 1/163 (0%)

Query: 31  LEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF 90
           L    P+   R ++L  +    +       +      +    +  ++ L  ++QQL    
Sbjct: 145 LIAENPQEALRQKHLMDQRQAQLQQVYAEQQRVAQAIQADQRQGYQRHLSEQHQQLVDKL 204

Query: 91  PQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYH 150
           P+ KD A+ +     +       G+  + +  + D R + +A  A +  Q    ++ A  
Sbjct: 205 PEWKDEARAKAESAAIRDYLLGQGYDTDAVNSVNDSRAVVIARKAMLYDQMISKTDAATK 264

Query: 151 KIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQTGSLYDSLEI 193
           K+ + P           +  +  +  A QKL +TG + D+ ++
Sbjct: 265 KVANLPTKVEQPGSG-ANPNLDRRTAAFQKLSKTGRVEDAAQV 306


>gi|307308933|ref|ZP_07588616.1| hypothetical protein SinmeBDRAFT_4500 [Sinorhizobium meliloti
           BL225C]
 gi|306900567|gb|EFN31180.1| hypothetical protein SinmeBDRAFT_4500 [Sinorhizobium meliloti
           BL225C]
          Length = 327

 Score = 44.7 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 71/163 (43%), Gaps = 3/163 (1%)

Query: 31  LEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF 90
           L    P  Y R + ++++  +I     ET        +  ++++ +++L     +    +
Sbjct: 163 LLNENPGEYVRQKEMQERRDSIARQLYETEMAMAQQREAQEAQLHQERLTESKTKFFETY 222

Query: 91  PQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYH 150
           P+ +D A+ +     + ++     F ++E+ +++D+R+L + Y       + K+      
Sbjct: 223 PELRDSARAKEAQVGMTQLLIDASFDQQELENLSDYRMLDILYRLWKAENTAKIVPQVVK 282

Query: 151 KIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQTGSLYDSLEI 193
               KP ++    K  + +    +EK   K  Q+G+L D+  +
Sbjct: 283 NFEQKPNISA---KEPSRKNFDHREKNWSKFKQSGNLDDAAAL 322


>gi|323452171|gb|EGB08046.1| hypothetical protein AURANDRAFT_71705 [Aureococcus anophagefferens]
          Length = 2383

 Score = 43.6 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 12/121 (9%)

Query: 58  ETGRNPDNIAKELDSEILEKK----LIAENQQLEHLFPQTKDPAQRENFFKNLFR----I 109
           + G  P    ++  S   E +    L+ E     +LF     P   + F   +F     +
Sbjct: 216 DDGEKPPATTRDDGSASKEARHHASLVGERPPRYNLFDPEALPEALKRFAPEVFASSEAL 275

Query: 110 GNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR 169
           GN  GFQ + + +  +H L+ LA     GL  Q  S  +           +      N+R
Sbjct: 276 GNFFGFQDDNVRNQAEHALMLLAN----GLAQQPPSSRSARGCDVAALGALHAKLFANYR 331

Query: 170 R 170
           R
Sbjct: 332 R 332


>gi|291334639|gb|ADD94287.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C64]
 gi|291334837|gb|ADD94477.1| hypothetical protein [uncultured phage MedDCM-OCT-S06-C1041]
          Length = 377

 Score = 43.2 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 70/198 (35%), Gaps = 6/198 (3%)

Query: 2   QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61
           +  A+  AQ    + Q +     +     L+ T P+ +   R    +  N I +  +T  
Sbjct: 169 EQSAQQNAQILNLVEQQLMTDFNNVPWDNLKTTDPQQWSIKRQEFTERQNAIQNIRQTAA 228

Query: 62  NPDN----IAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQK 117
                     K    + ++  L  E + L    P  KD   R      L       G+  
Sbjct: 229 QQYQQKLDAGKVEQQKQMQDLLQREQESLYRALPTFKDEETRNAEQVKLTNYLLTQGYSN 288

Query: 118 EEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKA 177
           +E+  + DHR L LA+ A      ++  E A  K+       +     ++ ++ T    A
Sbjct: 289 DELQTVYDHRTLVLAHKAMQFDSMKEKGETAKKKVAKIGKKVLKPGAKQSKKQQTIDADA 348

Query: 178 I--QKLYQTGSLYDSLEI 193
               +L +TG   D+  +
Sbjct: 349 KLRARLKETGDHRDAAAL 366


>gi|168334239|ref|ZP_02692440.1| anthranilate/para-aminobenzoate synthase component I, TrpE
           [Epulopiscium sp. 'N.t. morphotype B']
          Length = 481

 Score = 41.7 bits (96), Expect = 0.053,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 20/153 (13%)

Query: 26  DSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIA---- 81
           D+   L    P  Y  + +++  AL I       G +P+ + K +D +I    +      
Sbjct: 249 DAYRMLRVNNPSPY--MYFIKSDALEIC------GTSPETLVKVVDRKITTFPVAGTRPR 300

Query: 82  -----ENQQLEHLFPQTKDPAQRENFFKNLFR--IGNILGFQKEEMVDITD-HRLLSLAY 133
                E+ +LE      +      N   +L R  IG +  F   E+ +    HR   + +
Sbjct: 301 GKTPEEDAELERSLLADEKELAEHNMLVDLARNDIGRVAAFGTVEVEEYLQIHRYSKVMH 360

Query: 134 YAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAK 166
            A I   + K S DA+H I         +   K
Sbjct: 361 IASIVSGTLKKSFDAFHAINSLLPAGTLSGAPK 393


>gi|316934286|ref|YP_004109268.1| hypothetical protein Rpdx1_2954 [Rhodopseudomonas palustris DX-1]
 gi|315602000|gb|ADU44535.1| hypothetical protein Rpdx1_2954 [Rhodopseudomonas palustris DX-1]
          Length = 350

 Score = 41.7 bits (96), Expect = 0.062,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 58/158 (36%), Gaps = 5/158 (3%)

Query: 40  HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF-PQTKDPAQ 98
             +  +R  A                IA+ L S+  ++ +      L  L  P+      
Sbjct: 180 EELVAVRNAAKAAYEDVQYLETETSRIAEALRSQARQELMERAKDCLVTLTDPEKGIEGF 239

Query: 99  RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158
            +  + ++       G   + + D+ D   + L   A++ L+ Q++ + A    +  P  
Sbjct: 240 DQKMYGDICSFAVEQGLPADLVNDLVDPTAIKLINMARLYLKGQQVVQTAKSDKKKAPKR 299

Query: 159 NITTNKAKNHRR----ITSQEKAIQKLYQTGSLYDSLE 192
            + +  + +  R         + +++L  +GS+ D+ +
Sbjct: 300 IVKSTASPDQTRKVIKTAKAAEPMKRLKTSGSVDDASD 337


>gi|291334406|gb|ADD94062.1| hypothetical protein [uncultured phage MedDCM-OCT-S01-C1]
          Length = 367

 Score = 40.9 bits (94), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 51/139 (36%), Gaps = 11/139 (7%)

Query: 31  LEKTYPETY---HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKK---LIAENQ 84
           L  T P  +    R   +R + L         G       ++   +  +++   L +E +
Sbjct: 192 LRVTDPGEWTAKQREFEIRNQELQQAGQM--LGEQMKAQNEQQSQQHAQERSVILNSERE 249

Query: 85  QLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKL 144
           ++    P  +D  + +     +       GF  +E+ D+   R + +   A +  Q + +
Sbjct: 250 KMIENNPSWRDEEKMKGDLTKIVEYAKSNGFADDELSDVIHSRHVEVLRKAYLYDQGKTV 309

Query: 145 SEDAYHKIRHKPFVNITTN 163
           +     K++  P +   +N
Sbjct: 310 ASK---KVKQAPNMQRASN 325


>gi|27476050|ref|NP_775252.1| putative scaffold protein [Pseudomonas phage PaP3]
 gi|27414480|gb|AAL85566.1| ORF.06 [Pseudomonas phage PaP3]
          Length = 334

 Score = 40.1 bits (92), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 67/174 (38%), Gaps = 12/174 (6%)

Query: 29  PTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEH 88
             L+   PE Y ++R    +A +     ++   +   + ++    I    +  + +  + 
Sbjct: 163 EQLKAQDPEKYQKLRLEALEARDQAQALIKRRNDIKAMQEKRAEIIHSSYIKRQTELAKK 222

Query: 89  LFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDA 148
           L P+       E +   +   G  +G+ ++E+  I D R L++   A+   +SQ   + A
Sbjct: 223 LIPEMTTD---ETWGDKIVAYGKSIGYSEDEIRGIADARQLAVLDAARKWAESQVRRKAA 279

Query: 149 YHK-------IRHKPFV--NITTNKAKNHRRITSQEKAIQKLYQTGSLYDSLEI 193
             K          KP       +  +K  +   +  +  Q +    +L+ SL+I
Sbjct: 280 LEKKEETELPAAVKPVARRAEASEGSKRVKAARANLRKDQSVEAAAALFSSLDI 333


>gi|167600436|ref|YP_001671936.1| scaffolding protein [Pseudomonas phage LUZ24]
 gi|161168299|emb|CAP45464.1| scaffolding protein [Pseudomonas phage LUZ24]
          Length = 330

 Score = 39.0 bits (89), Expect = 0.32,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 68/174 (39%), Gaps = 12/174 (6%)

Query: 29  PTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEH 88
             L+   PE Y  +R    +A +     ++   +   + ++    I    +  + +  + 
Sbjct: 159 EQLKAQDPEKYQTLRLEALEARDRAQALIKRRNDIKAMQEKRAEIIHSAYVKRQTELAKK 218

Query: 89  LFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDA 148
           L P+       E++   +   G  +G+ ++E+  I+D R L++   A+   +SQ   + A
Sbjct: 219 LIPEMTTD---ESWGDKIVSYGKSIGYSEDEIRGISDARQLAVLDAARKWAESQVRRKAA 275

Query: 149 YHK-------IRHKPFV--NITTNKAKNHRRITSQEKAIQKLYQTGSLYDSLEI 193
             K          KP       +  +K  +   +  +  Q +    +L+ SL+I
Sbjct: 276 LEKKEETELPAAVKPAARRAEASEGSKRVKAARANLRKDQSVEAAAALFSSLDI 329


>gi|115762712|ref|XP_001200147.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus
           purpuratus]
 gi|115929849|ref|XP_001189612.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus
           purpuratus]
          Length = 1149

 Score = 39.0 bits (89), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 14/102 (13%)

Query: 47  QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAE-NQQLEHLFPQTKDPAQRENFFKN 105
           Q A   +   +E+  +P       +  I +  LI    ++    F +   P       KN
Sbjct: 306 QAAKETVLSLMESLESPAE-----EMAISDIGLIGVIPERTLLAFARQIRP-------KN 353

Query: 106 LFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSED 147
            + IG  LGF K E+    +HR L    YA I + S+ +S  
Sbjct: 354 FYEIGQKLGFNKSELQHF-EHRTLYNRKYANIQMLSRWISSQ 394


>gi|154299502|ref|XP_001550170.1| hypothetical protein BC1G_11013 [Botryotinia fuckeliana B05.10]
 gi|150857355|gb|EDN32547.1| hypothetical protein BC1G_11013 [Botryotinia fuckeliana B05.10]
          Length = 618

 Score = 38.6 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 1/115 (0%)

Query: 19  INHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKK 78
           I  ++P    P  ++         + L Q  +  +   +     P   A  L      K+
Sbjct: 210 IESNLPPAPDPEAQEEDTYESAIQKKLLQGLVTHMLE-MYIDVYPLEWAGRLQESFDPKR 268

Query: 79  LIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAY 133
           ++A    L   F  T +   RE     L  +   L     +++  T H    +A+
Sbjct: 269 VVAGRTSLAEAFQTTPEYQTRETVAGQLVSLSRDLELANYDLLFDTIHSKEPIAH 323


>gi|7362932|emb|CAB57253.3| putative glycosyltransferase [Entodinium caudatum]
          Length = 410

 Score = 38.2 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 2/80 (2%)

Query: 98  QRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157
           ++E  F ++F +  I  F K E  + T  +LL +  ++   L+ +K+ E  Y K   K  
Sbjct: 328 KKERMFGDVFNLETIFDFSKNEYKNFTIDKLLKMKAWSHFTLEDEKIKE--YFKSVIKKI 385

Query: 158 VNITTNKAKNHRRITSQEKA 177
           +N    + K    I    K 
Sbjct: 386 LNSKYLEEKYKLEIRKAYKG 405


>gi|325001241|ref|ZP_08122353.1| succinyl-CoA synthetase subunit beta [Pseudonocardia sp. P1]
          Length = 391

 Score = 38.2 bits (87), Expect = 0.68,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 4/103 (3%)

Query: 29  PTLEKTYPETYHRIRYLRQKALNII--NHFVETGRNPDNIAKELDSEILE--KKLIAENQ 84
             L    PE   RI       ++    +  V  G+ P  +A E  + I++  +  +AE+ 
Sbjct: 126 EELAVERPEALARIAIDPIAGVDKAKADEIVAAGKIPAAVADEAANVIVKLWETFVAEDA 185

Query: 85  QLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHR 127
            L  + P  +DP  +         +     F+ E   ++ D R
Sbjct: 186 TLVEVNPLVRDPQDKVIALDGKVTLDENAAFRHEAHAELVDER 228


>gi|320161008|ref|YP_004174232.1| ArsR family transcriptional regulator [Anaerolinea thermophila
           UNI-1]
 gi|319994861|dbj|BAJ63632.1| ArsR family transcriptional regulator [Anaerolinea thermophila
           UNI-1]
          Length = 194

 Score = 37.8 bits (86), Expect = 0.77,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 7/128 (5%)

Query: 2   QNQA-KILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60
           Q+ + + ++ S       ++HH+   S   L    PE+Y+ I  L    L  ++  +   
Sbjct: 38  QSMSVEQISTSLNLSPSTVSHHLAKLSEAGLVTAKPESYYNIYSLNSATLEEMSQRLLRK 97

Query: 61  RNPDNIAKELDSEILEKKLIAE----NQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQ 116
            N   +A+E+D E  ++K+I +      +L+ +  Q K       +    F  G    + 
Sbjct: 98  ENLVQLAEEIDLESFDRKVIRDYMTPTGKLKTIPAQEKKLLAILRYLAQSFETGK--SYS 155

Query: 117 KEEMVDIT 124
           + E+ +I 
Sbjct: 156 EREVNEIL 163


>gi|239827968|ref|YP_002950592.1| recombination and DNA strand exchange inhibitor protein
           [Geobacillus sp. WCH70]
 gi|259511159|sp|C5D5Q8|MUTS2_GEOSW RecName: Full=MutS2 protein
 gi|239808261|gb|ACS25326.1| MutS2 family protein [Geobacillus sp. WCH70]
          Length = 784

 Score = 37.4 bits (85), Expect = 0.96,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 13/146 (8%)

Query: 61  RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENF-FKNLFRIGNILGFQKEE 119
           R    + KE  +EI E +LI   ++LE   P  +   +      ++ F+ G+ +      
Sbjct: 592 RELRRMQKEKQAEIKEHELIEAKKRLEEAIPTLEKKKKERKKQTQHAFQPGDEVKVTSLN 651

Query: 120 MVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITT---NKAKNHR------- 169
                  ++    +  Q+G+   K++E     I   P          K K++        
Sbjct: 652 QKGYLVEKVSDDEWQVQLGILKMKINERDLEYIGSAPKTETKPLATVKGKDYHVGLELDL 711

Query: 170 RITSQEKAIQKLYQTGSLYDSLEIDF 195
           R    E AI +L +   + D+L   +
Sbjct: 712 RGERYEDAIVRLEKY--IDDALLAGY 735


>gi|283769574|ref|ZP_06342470.1| DNA primase [Bulleidia extructa W1219]
 gi|283103842|gb|EFC05228.1| DNA primase [Bulleidia extructa W1219]
          Length = 578

 Score = 37.4 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 1/90 (1%)

Query: 62  NPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
           +PD I ++   E LEK L  E +     F   +  +   + +    ++G  + F+ + + 
Sbjct: 337 DPDEIYRQKGQEALEKFLKQE-ESFMEFFMDYQLKSANLSNYSERKKVGQEIAFEIQNLK 395

Query: 122 DITDHRLLSLAYYAQIGLQSQKLSEDAYHK 151
           D  D R        ++GL  +        K
Sbjct: 396 DEVDRRYFQHLLEEKLGLNFKVSVNKTRTK 425


>gi|312863113|ref|ZP_07723351.1| ApbE family protein [Streptococcus vestibularis F0396]
 gi|322517022|ref|ZP_08069911.1| lipoprotein involved thiamine biosynthesis [Streptococcus
           vestibularis ATCC 49124]
 gi|311100649|gb|EFQ58854.1| ApbE family protein [Streptococcus vestibularis F0396]
 gi|322124439|gb|EFX95936.1| lipoprotein involved thiamine biosynthesis [Streptococcus
           vestibularis ATCC 49124]
          Length = 310

 Score = 37.4 bits (85), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 23  IPDDSSPTLEKTYP-----ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEK 77
           +P++ +P L+   P        ++  +L++K + I    +  G   D IA  L  E +  
Sbjct: 109 LPEEIAPLLDIINPKDIVLSEENQSVFLKEKGMKIDLGALAKGYIADRIADYLKDENVTS 168

Query: 78  KLIAENQQLEHLFPQTKDPAQR 99
            LI     +    P   +P Q+
Sbjct: 169 ALINLGGNVLTFGPALHNPDQK 190


>gi|170724679|ref|YP_001758705.1| hypothetical protein Swoo_0309 [Shewanella woodyi ATCC 51908]
 gi|169810026|gb|ACA84610.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
          Length = 898

 Score = 37.0 bits (84), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%)

Query: 31  LEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF 90
           ++   P     I+ LR + ++ I   VE   N  NIA  +  E   K L      LE   
Sbjct: 808 VDLDDPSALEPIKTLRDQTIHEIERLVELRDNTGNIAINMHLEHNLKLLKNTESVLESAS 867

Query: 91  PQTKDPAQRE 100
               +   +E
Sbjct: 868 NLLGNKESKE 877


>gi|260579223|ref|ZP_05847112.1| non-ribosomal peptide synthetase [Corynebacterium jeikeium ATCC
            43734]
 gi|258602651|gb|EEW15939.1| non-ribosomal peptide synthetase [Corynebacterium jeikeium ATCC
            43734]
          Length = 3504

 Score = 37.0 bits (84), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 9/114 (7%)

Query: 44   YLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFF 103
             L +  LN+       GR P  IA+ +  +  ++K+    Q  E   P+           
Sbjct: 2005 ALARADLNVTPRDFFLGRTPRKIAERVTPQATQQKIQETRQSQEEALPKDGHQE-----I 2059

Query: 104  KNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157
               F I  +L  Q E    ++D      A    +G  + +  E A  ++     
Sbjct: 2060 SGAFPIPAMLRRQME--RGMSDR--FVQARRLDLGPVAVEDLEQALQQVAQAHP 2109


>gi|68536869|ref|YP_251574.1| non-ribosomal peptide synthetase [Corynebacterium jeikeium K411]
 gi|68264468|emb|CAI37956.1| non-ribosomal peptide synthetase [Corynebacterium jeikeium K411]
          Length = 3618

 Score = 36.7 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 9/114 (7%)

Query: 44   YLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFF 103
             L +  LN+       GR P  IA+ +  +  ++K+    Q  E   P+           
Sbjct: 2119 ALARADLNVTPRDFFLGRTPRKIAERVTPQATQQKIQETRQSQEEALPKDGHQE-----I 2173

Query: 104  KNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157
               F I  +L  Q E    ++D      A    +G  + +  E A  ++     
Sbjct: 2174 SGAFPIPAMLRRQME--RGMSDR--FVQARRLDLGPVAVEDLEQALQQVAQAHP 2223


>gi|172040009|ref|YP_001799723.1| non-ribosomal peptide synthetase [Corynebacterium urealyticum DSM
            7109]
 gi|171851313|emb|CAQ04289.1| non-ribosomal peptide synthetase [Corynebacterium urealyticum DSM
            7109]
          Length = 3618

 Score = 36.7 bits (83), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 9/114 (7%)

Query: 44   YLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFF 103
             L +  LN+       GR P  IA+ +  +  ++K+    Q  E   P+           
Sbjct: 2119 ALARADLNVTPRDFFLGRTPRKIAERVTPQATQQKIQETRQSQEEALPKDGHQE-----I 2173

Query: 104  KNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157
               F I  +L  Q E    ++D      A    +G  + +  E A  ++     
Sbjct: 2174 SGAFPIPAMLRRQME--RGMSDR--FVQARRLDLGPVAVEDLEQALQQVAQAHP 2223


>gi|257465992|ref|ZP_05630303.1| type I restriction enzyme EcoKI subunit R [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917148|ref|ZP_07913388.1| type I restriction enzyme EcoKI subunit R [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313691023|gb|EFS27858.1| type I restriction enzyme EcoKI subunit R [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 1088

 Score = 35.9 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 61  RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120
           + P NI  +   E L K+    NQQLE   P+T     RE   + +++    + F + E 
Sbjct: 136 QKPKNIDYQEAYESLVKRSEEMNQQLEEWIPKTPSLRSREERRQLIYQ-KKRIEFTEAET 194

Query: 121 VDITDHRL 128
            +I DH+L
Sbjct: 195 REIIDHQL 202


>gi|329664360|ref|NP_001192894.1| laminin subunit alpha-4 [Bos taurus]
          Length = 1824

 Score = 35.9 bits (81), Expect = 2.9,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 29/186 (15%)

Query: 29  PTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAK----------------ELDS 72
             L +   +   +++  ++++++ INH  +      N+                  EL S
Sbjct: 354 EELAERESQASRKVQLAQKESMDTINHATQLAEQAHNMRDKIQEISSKMLYYGEEQELSS 413

Query: 73  EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHR-LLSL 131
           E + +KL+   + LE +  +     QRE   +       +L   +       D R L  +
Sbjct: 414 EEISEKLVLAQKMLEEIRRRQPFLTQRELVDEEADEAHELLSQAESWQRQYNDTRSLFPV 473

Query: 132 A------YYAQIGLQSQKLSEDAYHKIR-----HKPFVNITTNKAKNHRRITSQEKAIQK 180
                  Y A++    + L + A + +R     ++       +  K H R+  Q + +  
Sbjct: 474 VLEQLDDYNAKLSDLQESL-DQALNHVRDAEDMNRATAARQRDHEKQHERVREQTEGVNA 532

Query: 181 LYQTGS 186
             +T S
Sbjct: 533 SLRTSS 538


>gi|297467611|ref|XP_002705187.1| PREDICTED: laminin, alpha 4 [Bos taurus]
          Length = 1817

 Score = 35.9 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 29/186 (15%)

Query: 29  PTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAK----------------ELDS 72
             L +   +   +++  ++++++ INH  +      N+                  EL S
Sbjct: 347 EELAERESQASRKVQLAQKESMDTINHATQLAEQAHNMRDKIQEISSKMLYYGEEQELSS 406

Query: 73  EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHR-LLSL 131
           E + +KL+   + LE +  +     QRE   +       +L   +       D R L  +
Sbjct: 407 EEISEKLVLAQKMLEEIRRRQPFLTQRELVDEEADEAHELLSQAESWQRQYNDTRSLFPV 466

Query: 132 A------YYAQIGLQSQKLSEDAYHKIR-----HKPFVNITTNKAKNHRRITSQEKAIQK 180
                  Y A++    + L + A + +R     ++       +  K H R+  Q + +  
Sbjct: 467 VLEQLDDYNAKLSDLQESL-DQALNHVRDAEDMNRATAARQRDHEKQHERVREQTEGVNA 525

Query: 181 LYQTGS 186
             +T S
Sbjct: 526 SLRTSS 531


>gi|156986980|gb|ABU99468.1| heat shock protein 90 [Phytophthora sulawesiensis]
          Length = 582

 Score = 35.9 bits (81), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEVTSLDDYISRMPENQPGIYYVTGESK- 415

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 416 --KAVENSPFIEKLKKKG 431


>gi|156987084|gb|ABU99520.1| heat shock protein 90 [Phytophthora medicaginis]
          Length = 567

 Score = 35.5 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 283 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 342

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 343 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 400

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 401 --KAVENSPFIEKLKKKG 416


>gi|156986904|gb|ABU99430.1| heat shock protein 90 [Phytophthora trifolii]
          Length = 583

 Score = 35.5 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 416 --KAVENSPFIEKLKKKG 431


>gi|156987006|gb|ABU99481.1| heat shock protein 90 [Phytophthora erythroseptica]
          Length = 574

 Score = 35.5 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 290 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 349

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 350 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 407

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 408 --KAVENSPFIEKLKKKG 423


>gi|156986920|gb|ABU99438.1| heat shock protein 90 [Phytophthora trifolii]
          Length = 582

 Score = 35.5 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 416 --KAVENSPFIEKLKKKG 431


>gi|156986854|gb|ABU99405.1| heat shock protein 90 [Phytophthora medicaginis]
          Length = 582

 Score = 35.5 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 416 --KAVENSPFIEKLKKKG 431


>gi|253990285|ref|YP_003041641.1| transposase [Photorhabdus asymbiotica subsp. asymbiotica ATCC
           43949]
 gi|253781735|emb|CAQ84898.1| similar to putative transposase [Photorhabdus asymbiotica]
          Length = 316

 Score = 35.5 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 6/153 (3%)

Query: 6   KILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG--RNP 63
           KIL     AL +++  HI       L +          Y  ++  +++N+ ++ G   +P
Sbjct: 166 KILTHKRVALLEIVQKHIRQRDMAELLQELIMLLTYDYYTDEQLKSVLNYLLQVGDTADP 225

Query: 64  DNIAKEL--DSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121
           +   + L   S   E+ L+   Q+LE    Q      R+   +   + G   G Q+  + 
Sbjct: 226 EGFIRRLAEQSPKYEEVLMTIAQKLEQKGRQEGRREGRQEGRQEGRQEGRQEGRQEATLK 285

Query: 122 DITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRH 154
               H LL+     +  +++  LS++   +IRH
Sbjct: 286 --IAHALLNSGIDRETVMKATGLSQNELEQIRH 316


>gi|156986866|gb|ABU99411.1| heat shock protein 90 [Phytophthora cinnamomi]
 gi|156987012|gb|ABU99484.1| heat shock protein 90 [Phytophthora cinnamomi]
          Length = 582

 Score = 35.5 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLIKKCLEMFAELAEDNEKYNKFYEAF 357

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 416 --KAVENSPFIEKLKKKG 431


>gi|156986812|gb|ABU99384.1| heat shock protein 90 [Phytophthora cinnamomi]
 gi|156986816|gb|ABU99386.1| heat shock protein 90 [Phytophthora cinnamomi]
 gi|156986824|gb|ABU99390.1| heat shock protein 90 [Phytophthora cinnamomi]
 gi|156986852|gb|ABU99404.1| heat shock protein 90 [Phytophthora cinnamomi]
          Length = 582

 Score = 35.5 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 416 --KAVENSPFIEKLKKKG 431


>gi|156986958|gb|ABU99457.1| heat shock protein 90 [Phytophthora sansomea]
          Length = 582

 Score = 35.5 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 416 --KAVENSPFIEKLKKKG 431


>gi|156986766|gb|ABU99361.1| heat shock protein 90 [Phytophthora kelmania]
 gi|156987064|gb|ABU99510.1| heat shock protein 90 [Phytophthora sp. P3103]
 gi|156987134|gb|ABU99545.1| heat shock protein 90 [Phytophthora drechsleri]
          Length = 582

 Score = 35.5 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 416 --KAVENSPFIEKLKKKG 431


>gi|156986734|gb|ABU99345.1| heat shock protein 90 [Phytophthora drechsleri]
          Length = 583

 Score = 35.5 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 416 --KAVENSPFIEKLKKKG 431


>gi|156986744|gb|ABU99350.1| heat shock protein 90 [Phytophthora richardiae]
 gi|156986832|gb|ABU99394.1| heat shock protein 90 [Phytophthora erythroseptica]
 gi|156986838|gb|ABU99397.1| heat shock protein 90 [Phytophthora richardiae]
 gi|156987000|gb|ABU99478.1| heat shock protein 90 [Phytophthora sp. P10672]
 gi|156987010|gb|ABU99483.1| heat shock protein 90 [Phytophthora cryptogea]
 gi|156987026|gb|ABU99491.1| heat shock protein 90 [Phytophthora richardiae]
 gi|156987048|gb|ABU99502.1| heat shock protein 90 [Phytophthora richardiae]
 gi|156987050|gb|ABU99503.1| heat shock protein 90 [Phytophthora richardiae]
 gi|156987068|gb|ABU99512.1| heat shock protein 90 [Phytophthora richardiae]
 gi|156987110|gb|ABU99533.1| heat shock protein 90 [Phytophthora erythroseptica]
          Length = 582

 Score = 35.5 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 416 --KAVENSPFIEKLKKKG 431


>gi|297740437|emb|CBI30619.3| unnamed protein product [Vitis vinifera]
          Length = 499

 Score = 35.5 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 43  RYLRQKALNIINHFVETGRNPDNIA-KELDSEILEKKLIAENQQLEHLFP-QTKDPAQRE 100
           R     A  I     +  + P+ ++ +E   E  +K L A N       P + K     +
Sbjct: 353 RRAYDSATEIYMSAFDRTKPPEEVSLRESHDEAKQKSLAAFNASAVGAGPTRQKYENLLQ 412

Query: 101 NFFKNLFRIGNILGFQKEEMV 121
           NFF+  F       F + ++ 
Sbjct: 413 NFFRKAFEDYKRTAFMEADLQ 433


>gi|156986844|gb|ABU99400.1| heat shock protein 90 [Phytophthora clandestina]
          Length = 582

 Score = 35.5 bits (80), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 50  LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107
           L+ +   V++   P NI++E   +    ++I +N  ++   +F +  +  ++ N F   F
Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357

Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167
                LG  ++        +LL   +  + G +   L +       ++P +   T ++K 
Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415

Query: 168 HRRITSQEKAIQKLYQTG 185
             +       I+KL + G
Sbjct: 416 --KAVENSPFIEKLKKKG 431


>gi|147859754|emb|CAN78721.1| hypothetical protein VITISV_012125 [Vitis vinifera]
          Length = 495

 Score = 35.1 bits (79), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 43  RYLRQKALNIINHFVETGRNPDNIA-KELDSEILEKKLIAENQQLEHLFP-QTKDPAQRE 100
           R     A  I     +  + P+ ++ +E   E  +K L A N       P + K     +
Sbjct: 353 RRAYDSATEIYMSAFDRTKPPEEVSLRESHDEAKQKSLAAFNASAVGAGPTRQKYENLLQ 412

Query: 101 NFFKNLFRIGNILGFQKEEMV 121
           NFF+  F       F + ++ 
Sbjct: 413 NFFRKAFEDYKRTAFMEADLQ 433


>gi|297478490|ref|XP_002690150.1| PREDICTED: laminin, alpha 4, partial [Bos taurus]
 gi|296484180|gb|DAA26295.1| laminin, alpha 4 [Bos taurus]
          Length = 685

 Score = 35.1 bits (79), Expect = 5.6,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 29/186 (15%)

Query: 29  PTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAK----------------ELDS 72
             L +   +   +++  ++++++ INH  +      N+                  EL S
Sbjct: 354 EELAERESQASRKVQLAQKESMDTINHATQLAEQAHNMRDKIQEISSKMLYYGEEQELSS 413

Query: 73  EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHR-LLSL 131
           E + +KL+   + LE +  +     QRE   +       +L   +       D R L  +
Sbjct: 414 EEISEKLVLAQKMLEEIRRRQPFLTQRELVDEEADEAHELLSQAESWQRQYNDTRSLFPV 473

Query: 132 A------YYAQIGLQSQKLSEDAYHKIR-----HKPFVNITTNKAKNHRRITSQEKAIQK 180
                  Y A++    + L + A + +R     ++       +  K H R+  Q + +  
Sbjct: 474 VLEQLDDYNAKLSDLQESL-DQALNHVRDAEDMNRATAARQRDHEKQHERVREQTEGVNA 532

Query: 181 LYQTGS 186
             +T S
Sbjct: 533 SLRTSS 538


>gi|255080812|ref|XP_002503979.1| predicted protein [Micromonas sp. RCC299]
 gi|226519246|gb|ACO65237.1| predicted protein [Micromonas sp. RCC299]
          Length = 1022

 Score = 34.7 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 59/182 (32%), Gaps = 17/182 (9%)

Query: 20  NHHIPDDSSPTLEKTYPETY---HRIRYLR-QKALNIINHFV----ETGRNPDNIAKELD 71
           +  +P+D          E Y    R R    Q+ LN +   +    E   +  N AKE+ 
Sbjct: 806 DADLPNDPDLLKALKAAEKYAEASRQRADELQERLNAVEQMMKMFGEMSEHQYNTAKEIA 865

Query: 72  SEILE--KKLIAENQQLEHLFP------QTKDPAQRENFFKNLFRIGNILGFQKEEMVDI 123
           SE     +     +++++  F       +      R   F          G  ++E+  +
Sbjct: 866 SEATRRLESTTNVDERIDKRFEDMTLMLREARDEGRAEGFTEARNELQRFGSLEDEIAAM 925

Query: 124 TDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV-NITTNKAKNHRRITSQEKAIQKLY 182
           +      +    + G++   +      K R +    +    +A       S E A ++  
Sbjct: 926 SPEARAIVEKGLREGMEHGVVKGMQLEKERRRKAAISYKIKRALGLASSNSPEDAKKRAA 985

Query: 183 QT 184
           Q 
Sbjct: 986 QA 987


>gi|149921227|ref|ZP_01909683.1| serine/threonine kinase family protein [Plesiocystis pacifica
           SIR-1]
 gi|149817887|gb|EDM77349.1| serine/threonine kinase family protein [Plesiocystis pacifica
           SIR-1]
          Length = 1051

 Score = 34.7 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 56/149 (37%), Gaps = 25/149 (16%)

Query: 2   QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLR-QKALNIINHFVETG 60
           Q  A  +AQ+ ++++ L+    P +S   L ++ P T  R   L  +  +     + E G
Sbjct: 470 QADAGTVAQAPDSVSSLV----PPESCRDLARSGPTTRTREESLEVEATVAKAESYAELG 525

Query: 61  RNPDNIAKELDSEILEKKLIAE--------NQQLEHLFPQTK---DPAQRENFFKNLFRI 109
           R  +     L S      L AE          +L  +F Q+         E+        
Sbjct: 526 RYEE----ALRSSARATTLAAELGDVGGTGRAKLATMFAQSGLGRYEDAIES-GHEAIHA 580

Query: 110 GNILGFQKEEMVDITDHRLLSLAYYAQIG 138
             + G ++ +       ++L +  YAQ+G
Sbjct: 581 AALAGDEETQARA----QILLVRNYAQLG 605


>gi|325677646|ref|ZP_08157298.1| exonuclease SbcCD, C subunit [Ruminococcus albus 8]
 gi|324110614|gb|EGC04778.1| exonuclease SbcCD, C subunit [Ruminococcus albus 8]
          Length = 927

 Score = 34.3 bits (77), Expect = 9.1,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 14/173 (8%)

Query: 22  HIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKEL---------DS 72
            +P         T   T  R     +  L+I+   +++      + K+            
Sbjct: 337 QLPLYDEAERLLTDSVTLQRNAAKLKNDLDILGSSIKSDNERREVLKQFIDSLGDIGAQL 396

Query: 73  EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDI-TDH-RLLS 130
              + ++    ++LE +    KD ++ E     +        ++KEE  +  ++H RL +
Sbjct: 397 ANTKNEIENRTKELEEVTAVGKDLSEAEKLGAEVQSALEEFNYKKEESNNANSEHIRLFN 456

Query: 131 LAYYAQIGLQSQKLSEDAYHKI---RHKPFVNITTNKAKNHRRITSQEKAIQK 180
           L    Q GL +++L E     +    H P     + KA + + +   +  + K
Sbjct: 457 LYISEQAGLLAEELEEGVPCPVCGSTHHPNKAHRSEKAPDKQAVDRAKAVLDK 509


>gi|37525587|ref|NP_928931.1| hypothetical protein plu1643 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785015|emb|CAE13936.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 320

 Score = 34.3 bits (77), Expect = 9.2,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 6/155 (3%)

Query: 6   KILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG--RNP 63
           +IL     AL +++  HI       L +          Y  ++  +++N+ ++ G   +P
Sbjct: 166 EILTHKRVALLEMVQKHIRQRDMAELLQELVILLTYDYYTDEQLKSVLNYLLQVGDTADP 225

Query: 64  DNIAKEL--DSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQK--EE 119
           +   + L   S   E+ L+   Q+LEH   Q      R+   +   + G   G Q+  +E
Sbjct: 226 EGFIRRLAEQSPRYEEVLVTIAQRLEHKARQEGRQEGRQEGRQEGRQEGRQEGRQEGRQE 285

Query: 120 MVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRH 154
                 H LL+     +  +++  LS++   +IRH
Sbjct: 286 ATLKIAHALLNSGIDCETVMKTTGLSQNELEQIRH 320


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.302    0.127    0.309 

Lambda     K      H
   0.267   0.0384    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,843,183,604
Number of Sequences: 14124377
Number of extensions: 96961418
Number of successful extensions: 348130
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 154
Number of HSP's that attempted gapping in prelim test: 348063
Number of HSP's gapped (non-prelim): 202
length of query: 196
length of database: 4,842,793,630
effective HSP length: 132
effective length of query: 64
effective length of database: 2,978,375,866
effective search space: 190616055424
effective search space used: 190616055424
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.9 bits)
S2: 77 (34.4 bits)