BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781141|ref|YP_003065554.1| hypothetical protein CLIBASIA_05225 [Candidatus Liberibacter asiaticus str. psy62] (196 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781141|ref|YP_003065554.1| hypothetical protein CLIBASIA_05225 [Candidatus Liberibacter asiaticus str. psy62] gi|254040818|gb|ACT57614.1| hypothetical protein CLIBASIA_05225 [Candidatus Liberibacter asiaticus str. psy62] Length = 196 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/196 (100%), Positives = 196/196 (100%) Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG Sbjct: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60 Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM Sbjct: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120 Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK Sbjct: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180 Query: 181 LYQTGSLYDSLEIDFV 196 LYQTGSLYDSLEIDFV Sbjct: 181 LYQTGSLYDSLEIDFV 196 >gi|315122534|ref|YP_004063023.1| hypothetical protein CKC_03930 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495936|gb|ADR52535.1| hypothetical protein CKC_03930 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 328 Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 130/198 (65%), Positives = 160/198 (80%), Gaps = 2/198 (1%) Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60 +Q QAKILA SA++LAQLINHH+P D P+L +T P Y I LRQ+ALNIINHFVE G Sbjct: 131 VQKQAKILAHSADSLAQLINHHMPADPHPSLAQTDPSAYQNIINLRQQALNIINHFVEEG 190 Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120 R PD IAKELD+E +E KL EN+QLE++FPQTKDPAQRE+FF+N+F+IG +GFQ+EEM Sbjct: 191 RYPDKIAKELDAEHVEIKLKNENEQLENIFPQTKDPAQRESFFQNIFKIGKKIGFQEEEM 250 Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAK--NHRRITSQEKAI 178 +I DHRLL LA+YAQ+GLQSQK+SED Y KIRHKP + N+ K NH RITSQ++AI Sbjct: 251 KNIIDHRLLVLAHYAQLGLQSQKISEDVYRKIRHKPSGSSVPNRKKSCNHHRITSQQRAI 310 Query: 179 QKLYQTGSLYDSLEIDFV 196 QKL ++GS YD+L+IDFV Sbjct: 311 QKLQKSGSFYDALDIDFV 328 >gi|227822442|ref|YP_002826414.1| hypothetical protein NGR_c18970 [Sinorhizobium fredii NGR234] gi|227341443|gb|ACP25661.1| hypothetical protein NGR_c18970 [Sinorhizobium fredii NGR234] Length = 317 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 105/197 (53%), Gaps = 3/197 (1%) Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60 +++ + +A +A A+A+LI+ IP D L PETY R L Q L + + G Sbjct: 121 LESMSSRVAVTANAVAELISAQIPPDPPEELRLHDPETYQRQWALHQAGLKQLLRVMALG 180 Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120 P IA L E++L+ EN +L FPQT R+ FF + F LGF EE+ Sbjct: 181 EEPAGIAGALQDAASEERLVGENAKLLEAFPQTGQDEGRQAFFADAFEAARELGFTDEEI 240 Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN--HRRITSQEKAI 178 ++ DHRL LA+YA++GL +++ A K+ P T KAKN R+ +A+ Sbjct: 241 REVVDHRLFKLAHYARLGLLAKRARAKALQKVAVAPAAAPRT-KAKNQAQRQQRESREAM 299 Query: 179 QKLYQTGSLYDSLEIDF 195 ++L ++GS+ D++ +DF Sbjct: 300 RRLARSGSIRDAMAVDF 316 >gi|150397034|ref|YP_001327501.1| hypothetical protein Smed_1831 [Sinorhizobium medicae WSM419] gi|150028549|gb|ABR60666.1| hypothetical protein Smed_1831 [Sinorhizobium medicae WSM419] Length = 322 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 1/189 (0%) Query: 8 LAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIA 67 +A +A A+A+ + +P + + L P Y R + + AL + ++ P + Sbjct: 133 VATTANAIAEFLIQQLPAEPTRMLAIQNPAEYTRQKSVYDGALEQVQRLIDVSAEPKRVG 192 Query: 68 KELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHR 127 EL ++ L AEN +L FP+ RE FF F+ G GF ++EM TDHR Sbjct: 193 DELKQAATQETLAAENAKLLEAFPRLAREDARERFFAEAFKAGEDFGFSQDEMQGFTDHR 252 Query: 128 LLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTN-KAKNHRRITSQEKAIQKLYQTGS 186 + +YA +G ++++ A K+ + P + K + + + A+++L +TGS Sbjct: 253 YFKVMHYAMLGFRAEQAKSKALTKVANAPPATAKSKPKGPANPQARKNQDAMKRLAKTGS 312 Query: 187 LYDSLEIDF 195 + D+L IDF Sbjct: 313 IKDALLIDF 321 >gi|316973122|gb|EFV56749.1| putative von Willebrand factor type D domain protein [Trichinella spiralis] Length = 1122 Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 9/79 (11%) Query: 41 RIRYLRQKALNIINHFVETGRNPDN-------IAKELDSEILEKKLIAENQQLEHLFPQ- 92 R R LR+ L + +F GR+ D +AK+ SE+ KL+ ++++ HL Q Sbjct: 64 RSRLLRESLLKELEYFRNLGRDYDKQRAEQMEMAKKYRSEVESAKLLRKHREQCHLMAQL 123 Query: 93 -TKDPAQRENFFKNLFRIG 110 + P + E +KNL++ G Sbjct: 124 INQYPTREEKEWKNLYQYG 142 >gi|332291500|ref|YP_004430109.1| 2-oxoglutarate dehydrogenase, E1 subunit [Krokinobacter diaphorus 4H-3-7-5] gi|332169586|gb|AEE18841.1| 2-oxoglutarate dehydrogenase, E1 subunit [Krokinobacter diaphorus 4H-3-7-5] Length = 938 Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 30/159 (18%) Query: 58 ETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNL----------- 106 ++G P I + + E KLI + HLF +T +R + L Sbjct: 76 DSGTTPAAIPEAIQKEFQIVKLIDAYRNRGHLFTKTNPVRERRKYAPTLEIENFGLSQAD 135 Query: 107 ----FRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHK---PFVN 159 F G+ILG + + +I +H L Y IG++ Y IR+ ++ Sbjct: 136 MTLQFEAGSILGLGRTSLREIVNH--LEAIYCDHIGIE--------YMYIRNPEEIAWIQ 185 Query: 160 ITTNKAKNHRRITSQEKA--IQKLYQTGSLYDSLEIDFV 196 NK NH +++EK ++KL QT S L +V Sbjct: 186 NWLNKNDNHPEFSAEEKKHILKKLNQTASFEGFLHSKYV 224 >gi|303275620|ref|XP_003057104.1| flagellar inner arm heavy dynein chain [Micromonas pusilla CCMP1545] gi|226461456|gb|EEH58749.1| flagellar inner arm heavy dynein chain [Micromonas pusilla CCMP1545] Length = 4323 Score = 35.4 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 8/61 (13%) Query: 64 DNIAKELDSEILEKKLIA-------ENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQ 116 D + K L SE LE K +A N +L + +TKDP + + F K +F N+L FQ Sbjct: 1299 DEVNKGL-SEYLETKRLAFPRFYFLSNDELLEILSETKDPLRVQPFLKKVFEAINLLEFQ 1357 Query: 117 K 117 K Sbjct: 1358 K 1358 >gi|115624707|ref|XP_001203566.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115633855|ref|XP_001199961.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 359 Score = 35.4 bits (80), Expect = 3.7, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 25 DDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQ 84 DD S ++ +T+P T R+R + T R PDNI + L E L K++ EN+ Sbjct: 182 DDESKSMRETFPPTTRRVRKTPSPGIQPGQRAFPTDRIPDNI-RFLHGEELCKEVAKENE 240 Query: 85 QLEHLFPQTK 94 L P K Sbjct: 241 FLRKATPPPK 250 >gi|332828553|gb|EGK01253.1| hypothetical protein HMPREF9455_02445 [Dysgonomonas gadei ATCC BAA-286] Length = 759 Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 26/54 (48%) Query: 8 LAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61 L A L L N PD S ++K YPE Y IR LN I++F+E R Sbjct: 580 LPNRAAILDTLTNAVYPDKSEEAIKKMYPEDYRIIRDEIYPNLNRIDYFIELCR 633 >gi|301629922|ref|XP_002944081.1| PREDICTED: piggyBac transposable element-derived protein 4-like [Xenopus (Silurana) tropicalis] Length = 385 Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust. Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Query: 26 DSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRN--PDNIAKELDSEILEKK--LIA 81 ++SP L K P R +N++ F++ GRN DN L +L+ K L+ Sbjct: 120 NASPYLGKD-PSRQKGERLAENVVMNLMEPFLDEGRNVTTDNFFTSLSHRLLQHKTTLLG 178 Query: 82 ENQQLEHLFPQ-TKDPAQRENFFKNLFRIGNI 112 ++ PQ KD AQRE F ++ R G++ Sbjct: 179 TVNKVRRELPQLAKDTAQREVFSTSVLRSGSV 210 >gi|154248928|ref|YP_001409753.1| UDP-N-acetylglucosamine 2-epimerase [Fervidobacterium nodosum Rt17-B1] gi|154152864|gb|ABS60096.1| UDP-N-acetylglucosamine 2-epimerase [Fervidobacterium nodosum Rt17-B1] Length = 355 Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 34/62 (54%) Query: 45 LRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFK 104 +R+K +N N+FV T +NI + + + + + +E Q +E +FP K+P RE + Sbjct: 188 IRKKIINHTNYFVVTLHRRENIGQRMRNILRAIRKFSEEQNIEFVFPVHKNPKVREIVYS 247 Query: 105 NL 106 L Sbjct: 248 EL 249 >gi|148377320|ref|YP_001256196.1| putative deoxyribonuclease (YabD) deoxyribonuclease (TatD) [Mycoplasma agalactiae PG2] gi|148291366|emb|CAL58749.1| Conserved Hypothetical protein Putativedeoxyribonuclease (YabD) Deoxyribonuclease (TatD) [Mycoplasma agalactiae PG2] Length = 253 Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 9/64 (14%) Query: 48 KALNIINHFVET----GRNPDNIAKELDSEILE----KKLIAENQ-QLEHLFPQTKDPAQ 98 + LNI +HF T G +P+N +D EI+E K ++A + L++ +P TK Q Sbjct: 47 EVLNICSHFDYTFPVIGVHPNNSTGAIDGEIVESQLTKDVVAIGEIGLDYHYPDTKKDVQ 106 Query: 99 RENF 102 +E+F Sbjct: 107 KESF 110 Searching..................................................done Results from round 2 >gi|254781141|ref|YP_003065554.1| hypothetical protein CLIBASIA_05225 [Candidatus Liberibacter asiaticus str. psy62] gi|254040818|gb|ACT57614.1| hypothetical protein CLIBASIA_05225 [Candidatus Liberibacter asiaticus str. psy62] Length = 196 Score = 281 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 196/196 (100%), Positives = 196/196 (100%) Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG Sbjct: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60 Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM Sbjct: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120 Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK Sbjct: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKAIQK 180 Query: 181 LYQTGSLYDSLEIDFV 196 LYQTGSLYDSLEIDFV Sbjct: 181 LYQTGSLYDSLEIDFV 196 >gi|315122534|ref|YP_004063023.1| hypothetical protein CKC_03930 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495936|gb|ADR52535.1| hypothetical protein CKC_03930 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 328 Score = 270 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 130/198 (65%), Positives = 160/198 (80%), Gaps = 2/198 (1%) Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60 +Q QAKILA SA++LAQLINHH+P D P+L +T P Y I LRQ+ALNIINHFVE G Sbjct: 131 VQKQAKILAHSADSLAQLINHHMPADPHPSLAQTDPSAYQNIINLRQQALNIINHFVEEG 190 Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120 R PD IAKELD+E +E KL EN+QLE++FPQTKDPAQRE+FF+N+F+IG +GFQ+EEM Sbjct: 191 RYPDKIAKELDAEHVEIKLKNENEQLENIFPQTKDPAQRESFFQNIFKIGKKIGFQEEEM 250 Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAK--NHRRITSQEKAI 178 +I DHRLL LA+YAQ+GLQSQK+SED Y KIRHKP + N+ K NH RITSQ++AI Sbjct: 251 KNIIDHRLLVLAHYAQLGLQSQKISEDVYRKIRHKPSGSSVPNRKKSCNHHRITSQQRAI 310 Query: 179 QKLYQTGSLYDSLEIDFV 196 QKL ++GS YD+L+IDFV Sbjct: 311 QKLQKSGSFYDALDIDFV 328 >gi|150397034|ref|YP_001327501.1| hypothetical protein Smed_1831 [Sinorhizobium medicae WSM419] gi|150028549|gb|ABR60666.1| hypothetical protein Smed_1831 [Sinorhizobium medicae WSM419] Length = 322 Score = 251 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 1/196 (0%) Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60 ++ +A +A A+A+ + +P + + L P Y R + + AL + ++ Sbjct: 126 LETMTTRVATTANAIAEFLIQQLPAEPTRMLAIQNPAEYTRQKSVYDGALEQVQRLIDVS 185 Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120 P + EL ++ L AEN +L FP+ RE FF F+ G GF ++EM Sbjct: 186 AEPKRVGDELKQAATQETLAAENAKLLEAFPRLAREDARERFFAEAFKAGEDFGFSQDEM 245 Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTN-KAKNHRRITSQEKAIQ 179 TDHR + +YA +G ++++ A K+ + P + K + + + A++ Sbjct: 246 QGFTDHRYFKVMHYAMLGFRAEQAKSKALTKVANAPPATAKSKPKGPANPQARKNQDAMK 305 Query: 180 KLYQTGSLYDSLEIDF 195 +L +TGS+ D+L IDF Sbjct: 306 RLAKTGSIKDALLIDF 321 >gi|227822442|ref|YP_002826414.1| hypothetical protein NGR_c18970 [Sinorhizobium fredii NGR234] gi|227341443|gb|ACP25661.1| hypothetical protein NGR_c18970 [Sinorhizobium fredii NGR234] Length = 317 Score = 221 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 64/196 (32%), Positives = 103/196 (52%), Gaps = 1/196 (0%) Query: 1 MQNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60 +++ + +A +A A+A+LI+ IP D L PETY R L Q L + + G Sbjct: 121 LESMSSRVAVTANAVAELISAQIPPDPPEELRLHDPETYQRQWALHQAGLKQLLRVMALG 180 Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120 P IA L E++L+ EN +L FPQT R+ FF + F LGF EE+ Sbjct: 181 EEPAGIAGALQDAASEERLVGENAKLLEAFPQTGQDEGRQAFFADAFEAARELGFTDEEI 240 Query: 121 VDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTN-KAKNHRRITSQEKAIQ 179 ++ DHRL LA+YA++GL +++ A K+ P T K + R+ +A++ Sbjct: 241 REVVDHRLFKLAHYARLGLLAKRARAKALQKVAVAPAAAPRTKAKNQAQRQQRESREAMR 300 Query: 180 KLYQTGSLYDSLEIDF 195 +L ++GS+ D++ +DF Sbjct: 301 RLARSGSIRDAMAVDF 316 >gi|283856245|ref|YP_162118.2| hypothetical protein ZMO0383 [Zymomonas mobilis subsp. mobilis ZM4] gi|283775240|gb|AAV89007.2| hypothetical protein ZMO0383 [Zymomonas mobilis subsp. mobilis ZM4] Length = 283 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 11/190 (5%) Query: 10 QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKE 69 A+ LA+ P P L + P +Y + + V+ + Sbjct: 87 HYADQLAKYAEAITPKKPDPQLLVSDPASYAAQLASYEDLTAKRDQIVQEVIQISRQNEM 146 Query: 70 LDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLL 129 + E+Q+L L P+ D QR G LG+ + + + ++ Sbjct: 147 AELAARRAWAQGEHQRLISLLPEWGDDNQRPAILAAFEETGRHLGYPDHVLAEADSNDIM 206 Query: 130 SLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR---------RITSQEKAIQK 180 +L + +S+K DA + + + T++ + +++ + Sbjct: 207 ALKKAHEWRRKSEKW--DALQQGKAAAIKSAKTSRKTAVPGTSQPYGAAKSRKLNESLGQ 264 Query: 181 LYQTGSLYDS 190 L +TG + + Sbjct: 265 LRETGDVRSA 274 >gi|241760936|ref|ZP_04759025.1| hypothetical protein ZmobDRAFT_0101 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753096|ref|YP_003225989.1| hypothetical protein Za10_0859 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|241374555|gb|EER64016.1| hypothetical protein ZmobDRAFT_0101 [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552459|gb|ACV75405.1| hypothetical protein Za10_0859 [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 283 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 11/190 (5%) Query: 10 QSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKE 69 A+ LA+ P P L + P +Y + + V+ + Sbjct: 87 HYADQLAKYAEAITPKKPDPQLLVSDPASYAAQLASYEDLTAKRDQIVQEVIQISRQNEM 146 Query: 70 LDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLL 129 + E+Q+L L P+ D QR G LG+ + + + ++ Sbjct: 147 AELAARRAWAQGEHQRLISLLPEWGDDNQRPAILAAFEETGRHLGYPDHVLAEADSNDIM 206 Query: 130 SLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR---------RITSQEKAIQK 180 +L + +S+K DA + + + T++ + +++ + Sbjct: 207 ALKKAHEWRRKSEKW--DALQQGKAAAIKSAKTSRKTAVPGTSQPYGAAKSRKLNESLGQ 264 Query: 181 LYQTGSLYDS 190 L +TG + + Sbjct: 265 LRETGDVRSA 274 >gi|160897388|ref|YP_001562970.1| hypothetical protein Daci_1945 [Delftia acidovorans SPH-1] gi|160362972|gb|ABX34585.1| hypothetical protein Daci_1945 [Delftia acidovorans SPH-1] Length = 311 Score = 46.7 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 63/163 (38%), Gaps = 1/163 (0%) Query: 31 LEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF 90 L P+ R ++L + + + + + ++ L ++QQL Sbjct: 145 LIAENPQEALRQKHLMDQRQAQLQQVYAEQQRVAQAIQADQRQGYQRHLSEQHQQLVDKL 204 Query: 91 PQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYH 150 P+ KD A+ + + G+ + + + D R + +A A + Q ++ A Sbjct: 205 PEWKDEARAKAESAAIRDYLLGQGYDTDAVNSVNDSRAVVIARKAMLYDQMISKTDAATK 264 Query: 151 KIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQTGSLYDSLEI 193 K+ + P + + + A QKL +TG + D+ ++ Sbjct: 265 KVANLPTKVEQPGSG-ANPNLDRRTAAFQKLSKTGRVEDAAQV 306 >gi|307308933|ref|ZP_07588616.1| hypothetical protein SinmeBDRAFT_4500 [Sinorhizobium meliloti BL225C] gi|306900567|gb|EFN31180.1| hypothetical protein SinmeBDRAFT_4500 [Sinorhizobium meliloti BL225C] Length = 327 Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 71/163 (43%), Gaps = 3/163 (1%) Query: 31 LEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF 90 L P Y R + ++++ +I ET + ++++ +++L + + Sbjct: 163 LLNENPGEYVRQKEMQERRDSIARQLYETEMAMAQQREAQEAQLHQERLTESKTKFFETY 222 Query: 91 PQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYH 150 P+ +D A+ + + ++ F ++E+ +++D+R+L + Y + K+ Sbjct: 223 PELRDSARAKEAQVGMTQLLIDASFDQQELENLSDYRMLDILYRLWKAENTAKIVPQVVK 282 Query: 151 KIRHKPFVNITTNKAKNHRRITSQEKAIQKLYQTGSLYDSLEI 193 KP ++ K + + +EK K Q+G+L D+ + Sbjct: 283 NFEQKPNISA---KEPSRKNFDHREKNWSKFKQSGNLDDAAAL 322 >gi|323452171|gb|EGB08046.1| hypothetical protein AURANDRAFT_71705 [Aureococcus anophagefferens] Length = 2383 Score = 43.6 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 12/121 (9%) Query: 58 ETGRNPDNIAKELDSEILEKK----LIAENQQLEHLFPQTKDPAQRENFFKNLFR----I 109 + G P ++ S E + L+ E +LF P + F +F + Sbjct: 216 DDGEKPPATTRDDGSASKEARHHASLVGERPPRYNLFDPEALPEALKRFAPEVFASSEAL 275 Query: 110 GNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHR 169 GN GFQ + + + +H L+ LA GL Q S + + N+R Sbjct: 276 GNFFGFQDDNVRNQAEHALMLLAN----GLAQQPPSSRSARGCDVAALGALHAKLFANYR 331 Query: 170 R 170 R Sbjct: 332 R 332 >gi|291334639|gb|ADD94287.1| hypothetical protein [uncultured phage MedDCM-OCT-S04-C64] gi|291334837|gb|ADD94477.1| hypothetical protein [uncultured phage MedDCM-OCT-S06-C1041] Length = 377 Score = 43.2 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 70/198 (35%), Gaps = 6/198 (3%) Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGR 61 + A+ AQ + Q + + L+ T P+ + R + N I + +T Sbjct: 169 EQSAQQNAQILNLVEQQLMTDFNNVPWDNLKTTDPQQWSIKRQEFTERQNAIQNIRQTAA 228 Query: 62 NPDN----IAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQK 117 K + ++ L E + L P KD R L G+ Sbjct: 229 QQYQQKLDAGKVEQQKQMQDLLQREQESLYRALPTFKDEETRNAEQVKLTNYLLTQGYSN 288 Query: 118 EEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKNHRRITSQEKA 177 +E+ + DHR L LA+ A ++ E A K+ + ++ ++ T A Sbjct: 289 DELQTVYDHRTLVLAHKAMQFDSMKEKGETAKKKVAKIGKKVLKPGAKQSKKQQTIDADA 348 Query: 178 I--QKLYQTGSLYDSLEI 193 +L +TG D+ + Sbjct: 349 KLRARLKETGDHRDAAAL 366 >gi|168334239|ref|ZP_02692440.1| anthranilate/para-aminobenzoate synthase component I, TrpE [Epulopiscium sp. 'N.t. morphotype B'] Length = 481 Score = 41.7 bits (96), Expect = 0.053, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 20/153 (13%) Query: 26 DSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIA---- 81 D+ L P Y + +++ AL I G +P+ + K +D +I + Sbjct: 249 DAYRMLRVNNPSPY--MYFIKSDALEIC------GTSPETLVKVVDRKITTFPVAGTRPR 300 Query: 82 -----ENQQLEHLFPQTKDPAQRENFFKNLFR--IGNILGFQKEEMVDITD-HRLLSLAY 133 E+ +LE + N +L R IG + F E+ + HR + + Sbjct: 301 GKTPEEDAELERSLLADEKELAEHNMLVDLARNDIGRVAAFGTVEVEEYLQIHRYSKVMH 360 Query: 134 YAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAK 166 A I + K S DA+H I + K Sbjct: 361 IASIVSGTLKKSFDAFHAINSLLPAGTLSGAPK 393 >gi|316934286|ref|YP_004109268.1| hypothetical protein Rpdx1_2954 [Rhodopseudomonas palustris DX-1] gi|315602000|gb|ADU44535.1| hypothetical protein Rpdx1_2954 [Rhodopseudomonas palustris DX-1] Length = 350 Score = 41.7 bits (96), Expect = 0.062, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 58/158 (36%), Gaps = 5/158 (3%) Query: 40 HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF-PQTKDPAQ 98 + +R A IA+ L S+ ++ + L L P+ Sbjct: 180 EELVAVRNAAKAAYEDVQYLETETSRIAEALRSQARQELMERAKDCLVTLTDPEKGIEGF 239 Query: 99 RENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV 158 + + ++ G + + D+ D + L A++ L+ Q++ + A + P Sbjct: 240 DQKMYGDICSFAVEQGLPADLVNDLVDPTAIKLINMARLYLKGQQVVQTAKSDKKKAPKR 299 Query: 159 NITTNKAKNHRR----ITSQEKAIQKLYQTGSLYDSLE 192 + + + + R + +++L +GS+ D+ + Sbjct: 300 IVKSTASPDQTRKVIKTAKAAEPMKRLKTSGSVDDASD 337 >gi|291334406|gb|ADD94062.1| hypothetical protein [uncultured phage MedDCM-OCT-S01-C1] Length = 367 Score = 40.9 bits (94), Expect = 0.10, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 51/139 (36%), Gaps = 11/139 (7%) Query: 31 LEKTYPETY---HRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKK---LIAENQ 84 L T P + R +R + L G ++ + +++ L +E + Sbjct: 192 LRVTDPGEWTAKQREFEIRNQELQQAGQM--LGEQMKAQNEQQSQQHAQERSVILNSERE 249 Query: 85 QLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKL 144 ++ P +D + + + GF +E+ D+ R + + A + Q + + Sbjct: 250 KMIENNPSWRDEEKMKGDLTKIVEYAKSNGFADDELSDVIHSRHVEVLRKAYLYDQGKTV 309 Query: 145 SEDAYHKIRHKPFVNITTN 163 + K++ P + +N Sbjct: 310 ASK---KVKQAPNMQRASN 325 >gi|27476050|ref|NP_775252.1| putative scaffold protein [Pseudomonas phage PaP3] gi|27414480|gb|AAL85566.1| ORF.06 [Pseudomonas phage PaP3] Length = 334 Score = 40.1 bits (92), Expect = 0.18, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 67/174 (38%), Gaps = 12/174 (6%) Query: 29 PTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEH 88 L+ PE Y ++R +A + ++ + + ++ I + + + + Sbjct: 163 EQLKAQDPEKYQKLRLEALEARDQAQALIKRRNDIKAMQEKRAEIIHSSYIKRQTELAKK 222 Query: 89 LFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDA 148 L P+ E + + G +G+ ++E+ I D R L++ A+ +SQ + A Sbjct: 223 LIPEMTTD---ETWGDKIVAYGKSIGYSEDEIRGIADARQLAVLDAARKWAESQVRRKAA 279 Query: 149 YHK-------IRHKPFV--NITTNKAKNHRRITSQEKAIQKLYQTGSLYDSLEI 193 K KP + +K + + + Q + +L+ SL+I Sbjct: 280 LEKKEETELPAAVKPVARRAEASEGSKRVKAARANLRKDQSVEAAAALFSSLDI 333 >gi|167600436|ref|YP_001671936.1| scaffolding protein [Pseudomonas phage LUZ24] gi|161168299|emb|CAP45464.1| scaffolding protein [Pseudomonas phage LUZ24] Length = 330 Score = 39.0 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 68/174 (39%), Gaps = 12/174 (6%) Query: 29 PTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEH 88 L+ PE Y +R +A + ++ + + ++ I + + + + Sbjct: 159 EQLKAQDPEKYQTLRLEALEARDRAQALIKRRNDIKAMQEKRAEIIHSAYVKRQTELAKK 218 Query: 89 LFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDA 148 L P+ E++ + G +G+ ++E+ I+D R L++ A+ +SQ + A Sbjct: 219 LIPEMTTD---ESWGDKIVSYGKSIGYSEDEIRGISDARQLAVLDAARKWAESQVRRKAA 275 Query: 149 YHK-------IRHKPFV--NITTNKAKNHRRITSQEKAIQKLYQTGSLYDSLEI 193 K KP + +K + + + Q + +L+ SL+I Sbjct: 276 LEKKEETELPAAVKPAARRAEASEGSKRVKAARANLRKDQSVEAAAALFSSLDI 329 >gi|115762712|ref|XP_001200147.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpuratus] gi|115929849|ref|XP_001189612.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpuratus] Length = 1149 Score = 39.0 bits (89), Expect = 0.35, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 14/102 (13%) Query: 47 QKALNIINHFVETGRNPDNIAKELDSEILEKKLIAE-NQQLEHLFPQTKDPAQRENFFKN 105 Q A + +E+ +P + I + LI ++ F + P KN Sbjct: 306 QAAKETVLSLMESLESPAE-----EMAISDIGLIGVIPERTLLAFARQIRP-------KN 353 Query: 106 LFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSED 147 + IG LGF K E+ +HR L YA I + S+ +S Sbjct: 354 FYEIGQKLGFNKSELQHF-EHRTLYNRKYANIQMLSRWISSQ 394 >gi|154299502|ref|XP_001550170.1| hypothetical protein BC1G_11013 [Botryotinia fuckeliana B05.10] gi|150857355|gb|EDN32547.1| hypothetical protein BC1G_11013 [Botryotinia fuckeliana B05.10] Length = 618 Score = 38.6 bits (88), Expect = 0.42, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 1/115 (0%) Query: 19 INHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKK 78 I ++P P ++ + L Q + + + P A L K+ Sbjct: 210 IESNLPPAPDPEAQEEDTYESAIQKKLLQGLVTHMLE-MYIDVYPLEWAGRLQESFDPKR 268 Query: 79 LIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAY 133 ++A L F T + RE L + L +++ T H +A+ Sbjct: 269 VVAGRTSLAEAFQTTPEYQTRETVAGQLVSLSRDLELANYDLLFDTIHSKEPIAH 323 >gi|7362932|emb|CAB57253.3| putative glycosyltransferase [Entodinium caudatum] Length = 410 Score = 38.2 bits (87), Expect = 0.55, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 2/80 (2%) Query: 98 QRENFFKNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157 ++E F ++F + I F K E + T +LL + ++ L+ +K+ E Y K K Sbjct: 328 KKERMFGDVFNLETIFDFSKNEYKNFTIDKLLKMKAWSHFTLEDEKIKE--YFKSVIKKI 385 Query: 158 VNITTNKAKNHRRITSQEKA 177 +N + K I K Sbjct: 386 LNSKYLEEKYKLEIRKAYKG 405 >gi|325001241|ref|ZP_08122353.1| succinyl-CoA synthetase subunit beta [Pseudonocardia sp. P1] Length = 391 Score = 38.2 bits (87), Expect = 0.68, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 4/103 (3%) Query: 29 PTLEKTYPETYHRIRYLRQKALNII--NHFVETGRNPDNIAKELDSEILE--KKLIAENQ 84 L PE RI ++ + V G+ P +A E + I++ + +AE+ Sbjct: 126 EELAVERPEALARIAIDPIAGVDKAKADEIVAAGKIPAAVADEAANVIVKLWETFVAEDA 185 Query: 85 QLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHR 127 L + P +DP + + F+ E ++ D R Sbjct: 186 TLVEVNPLVRDPQDKVIALDGKVTLDENAAFRHEAHAELVDER 228 >gi|320161008|ref|YP_004174232.1| ArsR family transcriptional regulator [Anaerolinea thermophila UNI-1] gi|319994861|dbj|BAJ63632.1| ArsR family transcriptional regulator [Anaerolinea thermophila UNI-1] Length = 194 Score = 37.8 bits (86), Expect = 0.77, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 7/128 (5%) Query: 2 QNQA-KILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG 60 Q+ + + ++ S ++HH+ S L PE+Y+ I L L ++ + Sbjct: 38 QSMSVEQISTSLNLSPSTVSHHLAKLSEAGLVTAKPESYYNIYSLNSATLEEMSQRLLRK 97 Query: 61 RNPDNIAKELDSEILEKKLIAE----NQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQ 116 N +A+E+D E ++K+I + +L+ + Q K + F G + Sbjct: 98 ENLVQLAEEIDLESFDRKVIRDYMTPTGKLKTIPAQEKKLLAILRYLAQSFETGK--SYS 155 Query: 117 KEEMVDIT 124 + E+ +I Sbjct: 156 EREVNEIL 163 >gi|239827968|ref|YP_002950592.1| recombination and DNA strand exchange inhibitor protein [Geobacillus sp. WCH70] gi|259511159|sp|C5D5Q8|MUTS2_GEOSW RecName: Full=MutS2 protein gi|239808261|gb|ACS25326.1| MutS2 family protein [Geobacillus sp. WCH70] Length = 784 Score = 37.4 bits (85), Expect = 0.96, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 13/146 (8%) Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENF-FKNLFRIGNILGFQKEE 119 R + KE +EI E +LI ++LE P + + ++ F+ G+ + Sbjct: 592 RELRRMQKEKQAEIKEHELIEAKKRLEEAIPTLEKKKKERKKQTQHAFQPGDEVKVTSLN 651 Query: 120 MVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITT---NKAKNHR------- 169 ++ + Q+G+ K++E I P K K++ Sbjct: 652 QKGYLVEKVSDDEWQVQLGILKMKINERDLEYIGSAPKTETKPLATVKGKDYHVGLELDL 711 Query: 170 RITSQEKAIQKLYQTGSLYDSLEIDF 195 R E AI +L + + D+L + Sbjct: 712 RGERYEDAIVRLEKY--IDDALLAGY 735 >gi|283769574|ref|ZP_06342470.1| DNA primase [Bulleidia extructa W1219] gi|283103842|gb|EFC05228.1| DNA primase [Bulleidia extructa W1219] Length = 578 Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 1/90 (1%) Query: 62 NPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121 +PD I ++ E LEK L E + F + + + + ++G + F+ + + Sbjct: 337 DPDEIYRQKGQEALEKFLKQE-ESFMEFFMDYQLKSANLSNYSERKKVGQEIAFEIQNLK 395 Query: 122 DITDHRLLSLAYYAQIGLQSQKLSEDAYHK 151 D D R ++GL + K Sbjct: 396 DEVDRRYFQHLLEEKLGLNFKVSVNKTRTK 425 >gi|312863113|ref|ZP_07723351.1| ApbE family protein [Streptococcus vestibularis F0396] gi|322517022|ref|ZP_08069911.1| lipoprotein involved thiamine biosynthesis [Streptococcus vestibularis ATCC 49124] gi|311100649|gb|EFQ58854.1| ApbE family protein [Streptococcus vestibularis F0396] gi|322124439|gb|EFX95936.1| lipoprotein involved thiamine biosynthesis [Streptococcus vestibularis ATCC 49124] Length = 310 Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 5/82 (6%) Query: 23 IPDDSSPTLEKTYP-----ETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEK 77 +P++ +P L+ P ++ +L++K + I + G D IA L E + Sbjct: 109 LPEEIAPLLDIINPKDIVLSEENQSVFLKEKGMKIDLGALAKGYIADRIADYLKDENVTS 168 Query: 78 KLIAENQQLEHLFPQTKDPAQR 99 LI + P +P Q+ Sbjct: 169 ALINLGGNVLTFGPALHNPDQK 190 >gi|170724679|ref|YP_001758705.1| hypothetical protein Swoo_0309 [Shewanella woodyi ATCC 51908] gi|169810026|gb|ACA84610.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908] Length = 898 Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 26/70 (37%) Query: 31 LEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLF 90 ++ P I+ LR + ++ I VE N NIA + E K L LE Sbjct: 808 VDLDDPSALEPIKTLRDQTIHEIERLVELRDNTGNIAINMHLEHNLKLLKNTESVLESAS 867 Query: 91 PQTKDPAQRE 100 + +E Sbjct: 868 NLLGNKESKE 877 >gi|260579223|ref|ZP_05847112.1| non-ribosomal peptide synthetase [Corynebacterium jeikeium ATCC 43734] gi|258602651|gb|EEW15939.1| non-ribosomal peptide synthetase [Corynebacterium jeikeium ATCC 43734] Length = 3504 Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 9/114 (7%) Query: 44 YLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFF 103 L + LN+ GR P IA+ + + ++K+ Q E P+ Sbjct: 2005 ALARADLNVTPRDFFLGRTPRKIAERVTPQATQQKIQETRQSQEEALPKDGHQE-----I 2059 Query: 104 KNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157 F I +L Q E ++D A +G + + E A ++ Sbjct: 2060 SGAFPIPAMLRRQME--RGMSDR--FVQARRLDLGPVAVEDLEQALQQVAQAHP 2109 >gi|68536869|ref|YP_251574.1| non-ribosomal peptide synthetase [Corynebacterium jeikeium K411] gi|68264468|emb|CAI37956.1| non-ribosomal peptide synthetase [Corynebacterium jeikeium K411] Length = 3618 Score = 36.7 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 9/114 (7%) Query: 44 YLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFF 103 L + LN+ GR P IA+ + + ++K+ Q E P+ Sbjct: 2119 ALARADLNVTPRDFFLGRTPRKIAERVTPQATQQKIQETRQSQEEALPKDGHQE-----I 2173 Query: 104 KNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157 F I +L Q E ++D A +G + + E A ++ Sbjct: 2174 SGAFPIPAMLRRQME--RGMSDR--FVQARRLDLGPVAVEDLEQALQQVAQAHP 2223 >gi|172040009|ref|YP_001799723.1| non-ribosomal peptide synthetase [Corynebacterium urealyticum DSM 7109] gi|171851313|emb|CAQ04289.1| non-ribosomal peptide synthetase [Corynebacterium urealyticum DSM 7109] Length = 3618 Score = 36.7 bits (83), Expect = 1.7, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 9/114 (7%) Query: 44 YLRQKALNIINHFVETGRNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFF 103 L + LN+ GR P IA+ + + ++K+ Q E P+ Sbjct: 2119 ALARADLNVTPRDFFLGRTPRKIAERVTPQATQQKIQETRQSQEEALPKDGHQE-----I 2173 Query: 104 KNLFRIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPF 157 F I +L Q E ++D A +G + + E A ++ Sbjct: 2174 SGAFPIPAMLRRQME--RGMSDR--FVQARRLDLGPVAVEDLEQALQQVAQAHP 2223 >gi|257465992|ref|ZP_05630303.1| type I restriction enzyme EcoKI subunit R [Fusobacterium gonidiaformans ATCC 25563] gi|315917148|ref|ZP_07913388.1| type I restriction enzyme EcoKI subunit R [Fusobacterium gonidiaformans ATCC 25563] gi|313691023|gb|EFS27858.1| type I restriction enzyme EcoKI subunit R [Fusobacterium gonidiaformans ATCC 25563] Length = 1088 Score = 35.9 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 1/68 (1%) Query: 61 RNPDNIAKELDSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEM 120 + P NI + E L K+ NQQLE P+T RE + +++ + F + E Sbjct: 136 QKPKNIDYQEAYESLVKRSEEMNQQLEEWIPKTPSLRSREERRQLIYQ-KKRIEFTEAET 194 Query: 121 VDITDHRL 128 +I DH+L Sbjct: 195 REIIDHQL 202 >gi|329664360|ref|NP_001192894.1| laminin subunit alpha-4 [Bos taurus] Length = 1824 Score = 35.9 bits (81), Expect = 2.9, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 29/186 (15%) Query: 29 PTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAK----------------ELDS 72 L + + +++ ++++++ INH + N+ EL S Sbjct: 354 EELAERESQASRKVQLAQKESMDTINHATQLAEQAHNMRDKIQEISSKMLYYGEEQELSS 413 Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHR-LLSL 131 E + +KL+ + LE + + QRE + +L + D R L + Sbjct: 414 EEISEKLVLAQKMLEEIRRRQPFLTQRELVDEEADEAHELLSQAESWQRQYNDTRSLFPV 473 Query: 132 A------YYAQIGLQSQKLSEDAYHKIR-----HKPFVNITTNKAKNHRRITSQEKAIQK 180 Y A++ + L + A + +R ++ + K H R+ Q + + Sbjct: 474 VLEQLDDYNAKLSDLQESL-DQALNHVRDAEDMNRATAARQRDHEKQHERVREQTEGVNA 532 Query: 181 LYQTGS 186 +T S Sbjct: 533 SLRTSS 538 >gi|297467611|ref|XP_002705187.1| PREDICTED: laminin, alpha 4 [Bos taurus] Length = 1817 Score = 35.9 bits (81), Expect = 3.2, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 29/186 (15%) Query: 29 PTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAK----------------ELDS 72 L + + +++ ++++++ INH + N+ EL S Sbjct: 347 EELAERESQASRKVQLAQKESMDTINHATQLAEQAHNMRDKIQEISSKMLYYGEEQELSS 406 Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHR-LLSL 131 E + +KL+ + LE + + QRE + +L + D R L + Sbjct: 407 EEISEKLVLAQKMLEEIRRRQPFLTQRELVDEEADEAHELLSQAESWQRQYNDTRSLFPV 466 Query: 132 A------YYAQIGLQSQKLSEDAYHKIR-----HKPFVNITTNKAKNHRRITSQEKAIQK 180 Y A++ + L + A + +R ++ + K H R+ Q + + Sbjct: 467 VLEQLDDYNAKLSDLQESL-DQALNHVRDAEDMNRATAARQRDHEKQHERVREQTEGVNA 525 Query: 181 LYQTGS 186 +T S Sbjct: 526 SLRTSS 531 >gi|156986980|gb|ABU99468.1| heat shock protein 90 [Phytophthora sulawesiensis] Length = 582 Score = 35.9 bits (81), Expect = 3.4, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEVTSLDDYISRMPENQPGIYYVTGESK- 415 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 416 --KAVENSPFIEKLKKKG 431 >gi|156987084|gb|ABU99520.1| heat shock protein 90 [Phytophthora medicaginis] Length = 567 Score = 35.5 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 283 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 342 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 343 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 400 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 401 --KAVENSPFIEKLKKKG 416 >gi|156986904|gb|ABU99430.1| heat shock protein 90 [Phytophthora trifolii] Length = 583 Score = 35.5 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 416 --KAVENSPFIEKLKKKG 431 >gi|156987006|gb|ABU99481.1| heat shock protein 90 [Phytophthora erythroseptica] Length = 574 Score = 35.5 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 290 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 349 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 350 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 407 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 408 --KAVENSPFIEKLKKKG 423 >gi|156986920|gb|ABU99438.1| heat shock protein 90 [Phytophthora trifolii] Length = 582 Score = 35.5 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 416 --KAVENSPFIEKLKKKG 431 >gi|156986854|gb|ABU99405.1| heat shock protein 90 [Phytophthora medicaginis] Length = 582 Score = 35.5 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 416 --KAVENSPFIEKLKKKG 431 >gi|253990285|ref|YP_003041641.1| transposase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781735|emb|CAQ84898.1| similar to putative transposase [Photorhabdus asymbiotica] Length = 316 Score = 35.5 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 63/153 (41%), Gaps = 6/153 (3%) Query: 6 KILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG--RNP 63 KIL AL +++ HI L + Y ++ +++N+ ++ G +P Sbjct: 166 KILTHKRVALLEIVQKHIRQRDMAELLQELIMLLTYDYYTDEQLKSVLNYLLQVGDTADP 225 Query: 64 DNIAKEL--DSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMV 121 + + L S E+ L+ Q+LE Q R+ + + G G Q+ + Sbjct: 226 EGFIRRLAEQSPKYEEVLMTIAQKLEQKGRQEGRREGRQEGRQEGRQEGRQEGRQEATLK 285 Query: 122 DITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRH 154 H LL+ + +++ LS++ +IRH Sbjct: 286 --IAHALLNSGIDRETVMKATGLSQNELEQIRH 316 >gi|156986866|gb|ABU99411.1| heat shock protein 90 [Phytophthora cinnamomi] gi|156987012|gb|ABU99484.1| heat shock protein 90 [Phytophthora cinnamomi] Length = 582 Score = 35.5 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLIKKCLEMFAELAEDNEKYNKFYEAF 357 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 416 --KAVENSPFIEKLKKKG 431 >gi|156986812|gb|ABU99384.1| heat shock protein 90 [Phytophthora cinnamomi] gi|156986816|gb|ABU99386.1| heat shock protein 90 [Phytophthora cinnamomi] gi|156986824|gb|ABU99390.1| heat shock protein 90 [Phytophthora cinnamomi] gi|156986852|gb|ABU99404.1| heat shock protein 90 [Phytophthora cinnamomi] Length = 582 Score = 35.5 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 416 --KAVENSPFIEKLKKKG 431 >gi|156986958|gb|ABU99457.1| heat shock protein 90 [Phytophthora sansomea] Length = 582 Score = 35.5 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 416 --KAVENSPFIEKLKKKG 431 >gi|156986766|gb|ABU99361.1| heat shock protein 90 [Phytophthora kelmania] gi|156987064|gb|ABU99510.1| heat shock protein 90 [Phytophthora sp. P3103] gi|156987134|gb|ABU99545.1| heat shock protein 90 [Phytophthora drechsleri] Length = 582 Score = 35.5 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 416 --KAVENSPFIEKLKKKG 431 >gi|156986734|gb|ABU99345.1| heat shock protein 90 [Phytophthora drechsleri] Length = 583 Score = 35.5 bits (80), Expect = 4.0, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 416 --KAVENSPFIEKLKKKG 431 >gi|156986744|gb|ABU99350.1| heat shock protein 90 [Phytophthora richardiae] gi|156986832|gb|ABU99394.1| heat shock protein 90 [Phytophthora erythroseptica] gi|156986838|gb|ABU99397.1| heat shock protein 90 [Phytophthora richardiae] gi|156987000|gb|ABU99478.1| heat shock protein 90 [Phytophthora sp. P10672] gi|156987010|gb|ABU99483.1| heat shock protein 90 [Phytophthora cryptogea] gi|156987026|gb|ABU99491.1| heat shock protein 90 [Phytophthora richardiae] gi|156987048|gb|ABU99502.1| heat shock protein 90 [Phytophthora richardiae] gi|156987050|gb|ABU99503.1| heat shock protein 90 [Phytophthora richardiae] gi|156987068|gb|ABU99512.1| heat shock protein 90 [Phytophthora richardiae] gi|156987110|gb|ABU99533.1| heat shock protein 90 [Phytophthora erythroseptica] Length = 582 Score = 35.5 bits (80), Expect = 4.0, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 416 --KAVENSPFIEKLKKKG 431 >gi|297740437|emb|CBI30619.3| unnamed protein product [Vitis vinifera] Length = 499 Score = 35.5 bits (80), Expect = 4.3, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 2/81 (2%) Query: 43 RYLRQKALNIINHFVETGRNPDNIA-KELDSEILEKKLIAENQQLEHLFP-QTKDPAQRE 100 R A I + + P+ ++ +E E +K L A N P + K + Sbjct: 353 RRAYDSATEIYMSAFDRTKPPEEVSLRESHDEAKQKSLAAFNASAVGAGPTRQKYENLLQ 412 Query: 101 NFFKNLFRIGNILGFQKEEMV 121 NFF+ F F + ++ Sbjct: 413 NFFRKAFEDYKRTAFMEADLQ 433 >gi|156986844|gb|ABU99400.1| heat shock protein 90 [Phytophthora clandestina] Length = 582 Score = 35.5 bits (80), Expect = 4.5, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 6/138 (4%) Query: 50 LNIINHFVETGRNPDNIAKELDSEILEKKLIAEN--QQLEHLFPQTKDPAQRENFFKNLF 107 L+ + V++ P NI++E + ++I +N ++ +F + + ++ N F F Sbjct: 298 LSFVKGVVDSEDLPLNISRETLQQNKILRVIKKNLVKKCLEMFAELAEDNEKYNKFYEAF 357 Query: 108 RIGNILGFQKEEMVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFVNITTNKAKN 167 LG ++ +LL + + G + L + ++P + T ++K Sbjct: 358 SKNLKLGIHEDSTNRTKIAKLLRY-HSTKSGEEMTSLDDYISRMPENQPGIYYVTGESK- 415 Query: 168 HRRITSQEKAIQKLYQTG 185 + I+KL + G Sbjct: 416 --KAVENSPFIEKLKKKG 431 >gi|147859754|emb|CAN78721.1| hypothetical protein VITISV_012125 [Vitis vinifera] Length = 495 Score = 35.1 bits (79), Expect = 4.8, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 2/81 (2%) Query: 43 RYLRQKALNIINHFVETGRNPDNIA-KELDSEILEKKLIAENQQLEHLFP-QTKDPAQRE 100 R A I + + P+ ++ +E E +K L A N P + K + Sbjct: 353 RRAYDSATEIYMSAFDRTKPPEEVSLRESHDEAKQKSLAAFNASAVGAGPTRQKYENLLQ 412 Query: 101 NFFKNLFRIGNILGFQKEEMV 121 NFF+ F F + ++ Sbjct: 413 NFFRKAFEDYKRTAFMEADLQ 433 >gi|297478490|ref|XP_002690150.1| PREDICTED: laminin, alpha 4, partial [Bos taurus] gi|296484180|gb|DAA26295.1| laminin, alpha 4 [Bos taurus] Length = 685 Score = 35.1 bits (79), Expect = 5.6, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 29/186 (15%) Query: 29 PTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAK----------------ELDS 72 L + + +++ ++++++ INH + N+ EL S Sbjct: 354 EELAERESQASRKVQLAQKESMDTINHATQLAEQAHNMRDKIQEISSKMLYYGEEQELSS 413 Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDITDHR-LLSL 131 E + +KL+ + LE + + QRE + +L + D R L + Sbjct: 414 EEISEKLVLAQKMLEEIRRRQPFLTQRELVDEEADEAHELLSQAESWQRQYNDTRSLFPV 473 Query: 132 A------YYAQIGLQSQKLSEDAYHKIR-----HKPFVNITTNKAKNHRRITSQEKAIQK 180 Y A++ + L + A + +R ++ + K H R+ Q + + Sbjct: 474 VLEQLDDYNAKLSDLQESL-DQALNHVRDAEDMNRATAARQRDHEKQHERVREQTEGVNA 532 Query: 181 LYQTGS 186 +T S Sbjct: 533 SLRTSS 538 >gi|255080812|ref|XP_002503979.1| predicted protein [Micromonas sp. RCC299] gi|226519246|gb|ACO65237.1| predicted protein [Micromonas sp. RCC299] Length = 1022 Score = 34.7 bits (78), Expect = 6.4, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 59/182 (32%), Gaps = 17/182 (9%) Query: 20 NHHIPDDSSPTLEKTYPETY---HRIRYLR-QKALNIINHFV----ETGRNPDNIAKELD 71 + +P+D E Y R R Q+ LN + + E + N AKE+ Sbjct: 806 DADLPNDPDLLKALKAAEKYAEASRQRADELQERLNAVEQMMKMFGEMSEHQYNTAKEIA 865 Query: 72 SEILE--KKLIAENQQLEHLFP------QTKDPAQRENFFKNLFRIGNILGFQKEEMVDI 123 SE + +++++ F + R F G ++E+ + Sbjct: 866 SEATRRLESTTNVDERIDKRFEDMTLMLREARDEGRAEGFTEARNELQRFGSLEDEIAAM 925 Query: 124 TDHRLLSLAYYAQIGLQSQKLSEDAYHKIRHKPFV-NITTNKAKNHRRITSQEKAIQKLY 182 + + + G++ + K R + + +A S E A ++ Sbjct: 926 SPEARAIVEKGLREGMEHGVVKGMQLEKERRRKAAISYKIKRALGLASSNSPEDAKKRAA 985 Query: 183 QT 184 Q Sbjct: 986 QA 987 >gi|149921227|ref|ZP_01909683.1| serine/threonine kinase family protein [Plesiocystis pacifica SIR-1] gi|149817887|gb|EDM77349.1| serine/threonine kinase family protein [Plesiocystis pacifica SIR-1] Length = 1051 Score = 34.7 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 56/149 (37%), Gaps = 25/149 (16%) Query: 2 QNQAKILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLR-QKALNIINHFVETG 60 Q A +AQ+ ++++ L+ P +S L ++ P T R L + + + E G Sbjct: 470 QADAGTVAQAPDSVSSLV----PPESCRDLARSGPTTRTREESLEVEATVAKAESYAELG 525 Query: 61 RNPDNIAKELDSEILEKKLIAE--------NQQLEHLFPQTK---DPAQRENFFKNLFRI 109 R + L S L AE +L +F Q+ E+ Sbjct: 526 RYEE----ALRSSARATTLAAELGDVGGTGRAKLATMFAQSGLGRYEDAIES-GHEAIHA 580 Query: 110 GNILGFQKEEMVDITDHRLLSLAYYAQIG 138 + G ++ + ++L + YAQ+G Sbjct: 581 AALAGDEETQARA----QILLVRNYAQLG 605 >gi|325677646|ref|ZP_08157298.1| exonuclease SbcCD, C subunit [Ruminococcus albus 8] gi|324110614|gb|EGC04778.1| exonuclease SbcCD, C subunit [Ruminococcus albus 8] Length = 927 Score = 34.3 bits (77), Expect = 9.1, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 14/173 (8%) Query: 22 HIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETGRNPDNIAKEL---------DS 72 +P T T R + L+I+ +++ + K+ Sbjct: 337 QLPLYDEAERLLTDSVTLQRNAAKLKNDLDILGSSIKSDNERREVLKQFIDSLGDIGAQL 396 Query: 73 EILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQKEEMVDI-TDH-RLLS 130 + ++ ++LE + KD ++ E + ++KEE + ++H RL + Sbjct: 397 ANTKNEIENRTKELEEVTAVGKDLSEAEKLGAEVQSALEEFNYKKEESNNANSEHIRLFN 456 Query: 131 LAYYAQIGLQSQKLSEDAYHKI---RHKPFVNITTNKAKNHRRITSQEKAIQK 180 L Q GL +++L E + H P + KA + + + + + K Sbjct: 457 LYISEQAGLLAEELEEGVPCPVCGSTHHPNKAHRSEKAPDKQAVDRAKAVLDK 509 >gi|37525587|ref|NP_928931.1| hypothetical protein plu1643 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785015|emb|CAE13936.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 320 Score = 34.3 bits (77), Expect = 9.2, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 65/155 (41%), Gaps = 6/155 (3%) Query: 6 KILAQSAEALAQLINHHIPDDSSPTLEKTYPETYHRIRYLRQKALNIINHFVETG--RNP 63 +IL AL +++ HI L + Y ++ +++N+ ++ G +P Sbjct: 166 EILTHKRVALLEMVQKHIRQRDMAELLQELVILLTYDYYTDEQLKSVLNYLLQVGDTADP 225 Query: 64 DNIAKEL--DSEILEKKLIAENQQLEHLFPQTKDPAQRENFFKNLFRIGNILGFQK--EE 119 + + L S E+ L+ Q+LEH Q R+ + + G G Q+ +E Sbjct: 226 EGFIRRLAEQSPRYEEVLVTIAQRLEHKARQEGRQEGRQEGRQEGRQEGRQEGRQEGRQE 285 Query: 120 MVDITDHRLLSLAYYAQIGLQSQKLSEDAYHKIRH 154 H LL+ + +++ LS++ +IRH Sbjct: 286 ATLKIAHALLNSGIDCETVMKTTGLSQNELEQIRH 320 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.302 0.127 0.309 Lambda K H 0.267 0.0384 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,843,183,604 Number of Sequences: 14124377 Number of extensions: 96961418 Number of successful extensions: 348130 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 154 Number of HSP's that attempted gapping in prelim test: 348063 Number of HSP's gapped (non-prelim): 202 length of query: 196 length of database: 4,842,793,630 effective HSP length: 132 effective length of query: 64 effective length of database: 2,978,375,866 effective search space: 190616055424 effective search space used: 190616055424 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 77 (34.4 bits)