HHsearch alignment for GI: 254781147 and conserved domain: COG1396

>COG1396 HipB Predicted transcriptional regulators [Transcription].
Probab=98.02  E-value=2.9e-05  Score=52.05  Aligned_cols=61  Identities=31%  Similarity=0.485  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHCCCHHHHCC
Q ss_conf             99999999998399499999986342999988755899-94489999999992899999608
Q gi|254781147|r   22 FVNNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKS-TINIDNMIILAHTLDTPLWKLLK   82 (83)
Q Consensus        22 ~g~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~-~~~~~~l~~la~al~i~~~~l~~   82 (83)
T Consensus         2 ~~~~~~~~r~~~~~s~~~~a~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~   63 (120)
T COG1396           2 IGERLKELRKKKGLSQEELAERLGVSRSTISRIERGRSESPSLELLARLAAALGVSLDELLE   63 (120)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHH
T ss_conf             78999999998699999999893988999999980787784699999999996978998840