HHsearch alignment for GI: 254781147 and conserved domain: COG3423

>COG3423 Nlp Predicted transcriptional regulator [Transcription].
Probab=94.64  E-value=0.13  Score=30.45  Aligned_cols=55  Identities=13%  Similarity=0.124  Sum_probs=44.0

Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHC
Q ss_conf             9999999983994999999863429999887558999448999999999289999960
Q gi|254781147|r   24 NNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGKSTINIDNMIILAHTLDTPLWKLL   81 (83)
Q Consensus        24 ~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~~~~~~~~l~~la~al~i~~~~l~   81 (83)
T Consensus        11 adI~A~Lkk~G~Sl~~LS~~agls~~tL~n~L~r-p~pkgE--riIA~algv~P~eIW   65 (82)
T COG3423          11 ADIIAALKKKGTSLAALSREAGLSSSTLANALDR-PWPKGE--RIIADALGVPPEEIW   65 (82)
T ss_pred             HHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCC-CCCHHH--HHHHHHHCCCHHHHC
T ss_conf             9999999985642999998808787899998747-887188--999999589888818