HHsearch alignment for GI: 254781147 and conserved domain: PHA00542
>PHA00542 putative Cro-like protein.
Probab=97.04 E-value=0.0016 Score=41.76 Aligned_cols=49 Identities=18% Similarity=0.195 Sum_probs=42.0
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC-CCCCHHHHHHHHHH
Q ss_conf 99999999839949999998634299998875589-99448999999999
Q gi|254781147|r 24 NNFRNIRKEAKLTQKEIRNRTGFAQSWISELETGK-STINIDNMIILAHT 72 (83)
Q Consensus 24 ~~ir~~R~~~gltq~ela~~~gis~~~is~iE~G~-~~~~~~~l~~la~a 72 (83)
T Consensus 21 ~E~V~aLi~~G~tQ~qI~~~tgv~QpsisRilsGk~kDpR~s~v~~L~~L 70 (82)
T PHA00542 21 DELVCALIRAGWSQEQIADATDVSQPTICRIYSGRHKDPRYSVVEKLRHL 70 (82)
T ss_pred HHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 99999999822569999986087703689998088789720699999999